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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2236027..2236844- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002308-T1 ID=KJC3_002308-T1|Name=KJC3_002308-T1|organism=Aspergillus niger KJC3|type=mRNA|length=818bp|location=Sequence derived from alignment at ch2:2236027..2236844- (Aspergillus niger KJC3)
CCTTCTTACACCCTTTAATCCTATATCCATCGGAATAACTAGTCTACTTA
ATACAATGAGCACATATCCACCTGGATACCGTATTGCGCTGGCTGTCGGC
CTGAGTGGCGCAGCATGGCTGTCTGGTAGCGCCCATCCTCCCCCTTCTCT
TCTGTTCTAACTGGCACTCGCAACCCTACACAGGCAACATTGCTGCTCTC
AGTCTAATCGCCGTCCCAGCATTGACCAATGCTCGAGACGAGAAGTCAGT
GCCGCCAGGTACAGTCGTCAAGTTGTGGAATAAAATCTATGATGCCGGCA
AGTCCCAGAATCCACCGGTTGCGGCTACCACGGCGGCCGCATTCCTCTAC
CTCGCCTGGTCCGTCCACCCTGGCAGCCCCACGACGTACAATCTGGCTGG
GCTTTATACCGCGGCTGCTGTTTTGACTGTGAGCATTGTGCCGTACACTA
TCCTCACGATGCGACCAACCAACAATGCCCTTATTAAGCTAGCCAAATCC
CGAGGAGAGCTGACGTCCACTGAAGTGGCTCAGAGCAACGATCTTCTCGG
CCGATGGGTGGTGTTGAATGGCATCCGGAGTCTCCTGCCCCTGCTTGGTG
GGGTGGTGGCCACCACAGCGGCTTATTTTTAGGTGTGAGGCCATAAGAGG
ACTCTTATCGTGGCCTGGGATTCAATTCTTGGTTGTGCCTTCTACATATA
TTTGAGACCTGAGGAGGTGTAGCGAGGCACGAAGGGTGGACGAGTACTCA
TAGCTTGTTCGACTTCTATCAACTAATTTTGAATACCATAATTGCAATAA
TAAGATTGTTCATTTCAG back to topCoding sequence (CDS) from alignment at ch2:2236027..2236844- >KJC3_002308-T1 ID=KJC3_002308-T1|Name=KJC3_002308-T1|organism=Aspergillus niger KJC3|type=CDS|length=1038bp|location=Sequence derived from alignment at ch2:2236027..2236844- (Aspergillus niger KJC3)
GCAACATTGCTGCTCTCAGTCTAATCGCCGTCCCAGCATTGACCAATGCT
CGAGACGAGAAGTCAGTGCCGCCAGGTACAGTCGTCAAGTTGTGGAATAA
AATCTATGATGCCGGCAAGTCCCAGAATCCACCGGTTGCGGCTACCACGG
CGGCCGCATTCCTCTACCTCGCCTGGTCCGTCCACCCTGGCAGCCCCACG
ACGTACAATCTGGCTGGGCTTTATACCGCGGCTGCTGTTTTGACTGTGAG
CATTGTGCCGTACACTATCCTCACGATGCGACCAACCAACAATGCCCTTA
TTAAGCTAGCCAAATCCCGAGGAGAGCTGACGTCCACTGAAGTGGCTCAG
AGCAACGATCTTCTCGGCCGATGGGTGGTGTTGAATGGCATCCGGAGTCT
CCTGCCCCTGCTTGGTGGGGTGGTGGCCACCACAGCGGCTTATTTTTAGA
TGAGCACATATCCACCTGGATACCGTATTGCGCTGGCTGTCGGCCTGAGT
GGCGCAGCATGGCTGTCTGGCAACATTGCTGCTCTCAGTCTAATCGCCGT
CCCAGCATTGACCAATGCTCGAGACGAGAAGTCAGTGCCGCCAGGTACAG
TCGTCAAGTTGTGGAATAAAATCTATGATGCCGGCAAGTCCCAGAATCCA
CCGGTTGCGGCTACCACGGCGGCCGCATTCCTCTACCTCGCCTGGTCCGT
CCACCCTGGCAGCCCCACGACGTACAATCTGGCTGGGCTTTATACCGCGG
CTGCTGTTTTGACTGTGAGCATTGTGCCGTACACTATCCTCACGATGCGA
CCAACCAACAATGCCCTTATTAAGCTAGCCAAATCCCGAGGAGAGCTGAC
GTCCACTGAAGTGGCTCAGAGCAACGATCTTCTCGGCCGATGGGTGGTGT
TGAATGGCATCCGGAGTCTCCTGCCCCTGCTTGGTGGGGTGGTGGCCACC
ACAGCGGCTTATTTTTAGATGAGCACATATCCACCTGGATACCGTATTGC
GCTGGCTGTCGGCCTGAGTGGCGCAGCATGGCTGTCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002308-T1.utr3p1 | KJC3_002308-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002308-T1.utr5p1 | KJC3_002308-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF08592 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2236027..2236844 - |
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