You are here

Home

KJC3_002312-T1, KJC3_002312-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002312-T1
Unique NameKJC3_002312-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2243378..2244118-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002312-T1 ID=KJC3_002312-T1|Name=KJC3_002312-T1|organism=Aspergillus niger KJC3|type=mRNA|length=741bp|location=Sequence derived from alignment at ch2:2243378..2244118- (Aspergillus niger KJC3)
GCAAATACTCGTCATAGTCACTTGTTCTGTCCGAAAGCTTCCATATTAGT
ACTGGTCGGCTTTCCCACGAAATACAACAATCGCCCTACAATTATACCAG
CAGTACCAAGCAAGCATGTCTACGGTCAATATGGTCAAATACTACTTCTA
TCGGGGTATGCTGCCAGCCGACCAAGACAGACTGCGCCAGCTGCTGGCCT
TGGCCTATCAAACAGCAAGAGATAGAAAACTATATCCTAAAGCCGTTCTT
ATCAGGTGAGAGAGATACTTGTTTTTCGACGTTCTTGCTGAATCCTAATT
TGGGCTATGTGTCCTTCCAGATCCGAGGTCCATGATACAACCAGCATCAA
CGGTGTACGCCAGAAAGATCCTTTAGGTCCACACGTGACCCTTTGCTACA
AGGATGAAACCCAGATCCTCCGCGGAACCCATATCGCCAGTCACGGTTAT
GTTCACGGAAAGGATGACCTTGAGTTTGTGCGCGCAACGCACGCCGGAGA
GAAGCCCGACTCAGCTAAAAGGCAACAAGGAAGGAAGACGGTGTGGCCAT
CAGATGAGGAGCTTGTGACTGCACCAGAGATCGGCTACGGCCATTTTCCA
GAGAATTAGGGTTTCAGTTATGCTTGGAGTGTATTGGTCGGCCAGGGCTG
TGATTTGTTTTTTGTCTCCGGCTTCCCTTCTTGAATGTGATAGATTATGT
CTCATAAAATCAGAGCCTATCCAAGCTGTAGTGCCTTGACA
back to top

Coding sequence (CDS) from alignment at ch2:2243378..2244118-

>KJC3_002312-T1 ID=KJC3_002312-T1|Name=KJC3_002312-T1|organism=Aspergillus niger KJC3|type=CDS|length=858bp|location=Sequence derived from alignment at ch2:2243378..2244118- (Aspergillus niger KJC3)
ATCCGAGGTCCATGATACAACCAGCATCAACGGTGTACGCCAGAAAGATC
CTTTAGGTCCACACGTGACCCTTTGCTACAAGGATGAAACCCAGATCCTC
CGCGGAACCCATATCGCCAGTCACGGTTATGTTCACGGAAAGGATGACCT
TGAGTTTGTGCGCGCAACGCACGCCGGAGAGAAGCCCGACTCAGCTAAAA
GGCAACAAGGAAGGAAGACGGTGTGGCCATCAGATGAGGAGCTTGTGACT
GCACCAGAGATCGGCTACGGCCATTTTCCAGAGAATTAGATGTCTACGGT
CAATATGGTCAAATACTACTTCTATCGGGGTATGCTGCCAGCCGACCAAG
ACAGACTGCGCCAGCTGCTGGCCTTGGCCTATCAAACAGCAAGAGATAGA
AAACTATATCCTAAAGCCGTTCTTATCAGATCCGAGGTCCATGATACAAC
CAGCATCAACGGTGTACGCCAGAAAGATCCTTTAGGTCCACACGTGACCC
TTTGCTACAAGGATGAAACCCAGATCCTCCGCGGAACCCATATCGCCAGT
CACGGTTATGTTCACGGAAAGGATGACCTTGAGTTTGTGCGCGCAACGCA
CGCCGGAGAGAAGCCCGACTCAGCTAAAAGGCAACAAGGAAGGAAGACGG
TGTGGCCATCAGATGAGGAGCTTGTGACTGCACCAGAGATCGGCTACGGC
CATTTTCCAGAGAATTAGATGTCTACGGTCAATATGGTCAAATACTACTT
CTATCGGGGTATGCTGCCAGCCGACCAAGACAGACTGCGCCAGCTGCTGG
CCTTGGCCTATCAAACAGCAAGAGATAGAAAACTATATCCTAAAGCCGTT
CTTATCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002312KJC3_002312Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002312-T1KJC3_002312-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002312-T1.cdsKJC3_002312-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002312-T1.utr3p1KJC3_002312-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002312-T1.exon2KJC3_002312-T1.exon2Aspergillus niger KJC3exon
KJC3_002312-T1.exon1KJC3_002312-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002312-T1.utr5p1KJC3_002312-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2243378..2244118 -
Powered by Drupal