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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2246708..2247855+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002314-T1 ID=KJC3_002314-T1|Name=KJC3_002314-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1148bp|location=Sequence derived from alignment at ch2:2246708..2247855+ (Aspergillus niger KJC3)
ATGCCTGCCTCTGTAGAGCCCGAAGACCAGACATATGTCCTCTCCCACCG
TTCCAAGCAAACGGAAGAACACGAACGGCTGAACCGACAGCACAACCTCA
TCCAGCAGACGTTTCTCAACAATCAGCTCATCCACCCTTCCATTCCGCTG
TCGTCTCTAACGGGTGGAATCGCTGACATTGGCTGCGGGACAGGTATTTG
GCTGCACGAAGTAGCTCAGTCCTTACCGTCCCCAGGCGGGGCTACTGCAT
CCCAAACCACAACCACTTTCCCATCTCTTGTTGGCTTTGACTTGAACGCG
GCCGCATTCCCCGAGAACCCCAAACTGGGAATCCAACTTGTGCAGCACGA
CTGCACCAAACCTTTCGACGCCCGCTATCATGGGCAATTTGACCTGGTCA
ATATCCGCGGCCTTGCGTATGCAATTACGGAGGAGAAGCTCTCTCGAGCG
CTTGACAATGCATTGCTACTCTTGAGTAAGTTGTTCGTCCCTTTCTAGTG
ACCGCCCTTGTACACTATTTCCGCTTGATATCTAATCTTTGGTCGTTCTT
ACAGGGCCAGGAGGCTACCTCCAGTGGACAGAAAGCGAAGCCCGACTTTT
CAAAGTGTTCCCGGAAACACCAGATATGCTGAAAGCAATGGAAATCATTG
ATGTGGAGAGACGGGCTCGCGATCTAGTACCTTAGTGAGTATTTACGCGC
TTTCTGCCTCGCTTTCCTTCACTTGTTGTCGCTTAATCAGATTGACTGAC
TTCCTTCCTTTTCGGGTCTTTTCAGTCTACCACATTTCATGCTGCGACGA
ATCCTCTCACTTAAAGGTGATAATGATGAAGATGCTCTCAGTATCCTTCA
TTTCAATCTACGTCCCGGAGGGTTCTGTCAGGATGATGTTGATCCAGACG
TCTGCCTCCAATTTTCGGATCTTCTCACAGAGTCGGTCAGCCTTTTCCTG
CACTCTGCCCTTATGAGAATGGAACAACAGCAGTCCCAGAACGGAACTGC
AGCTGAGAACGACAATCTCCGGAAATCAGAACTGGATGAACTGCGTAAAT
TGAAGTCTTCTGTTAGTGAAACTATCGAGGCTAAACATGTCAGAATGGGT
GGAATCTTTCCTCATCTTGTGGCGCAAAAGAGATGATTTGGCGTTGCG back to topCoding sequence (CDS) from alignment at ch2:2246708..2247855+ >KJC3_002314-T1 ID=KJC3_002314-T1|Name=KJC3_002314-T1|organism=Aspergillus niger KJC3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch2:2246708..2247855+ (Aspergillus niger KJC3)
ATGCCTGCCTCTGTAGAGCCCGAAGACCAGACATATGTCCTCTCCCACCG
TTCCAAGCAAACGGAAGAACACGAACGGCTGAACCGACAGCACAACCTCA
TCCAGCAGACGTTTCTCAACAATCAGCTCATCCACCCTTCCATTCCGCTG
TCGTCTCTAACGGGTGGAATCGCTGACATTGGCTGCGGGACAGGTATTTG
GCTGCACGAAGTAGCTCAGTCCTTACCGTCCCCAGGCGGGGCTACTGCAT
CCCAAACCACAACCACTTTCCCATCTCTTGTTGGCTTTGACTTGAACGCG
GCCGCATTCCCCGAGAACCCCAAACTGGGAATCCAACTTGTGCAGCACGA
CTGCACCAAACCTTTCGACGCCCGCTATCATGGGCAATTTGACCTGGTCA
ATATCCGCGGCCTTGCGTATGCAATTACGGAGGAGAAGCTCTCTCGAGCG
CTTGACAATGCATTGCTACTCTTGAGGCCAGGAGGCTACCTCCAGTGGAC
AGAAAGCGAAGCCCGACTTTTCAAAGTGTTCCCGGAAACACCAGATATGC
TGAAAGCAATGGAAATCATTGATGTGGAGAGACGGGCTCGCGATCTAGTA
CCTTATCTACCACATTTCATGCTGCGACGAATCCTCTCACTTAAAGGTGA
TAATGATGAAGATGCTCTCAGTATCCTTCATTTCAATCTACGTCCCGGAG
GGTTCTGTCAGGATGATGTTGATCCAGACGTCTGCCTCCAATTTTCGGAT
CTTCTCACAGAGTCGGTCAGCCTTTTCCTGCACTCTGCCCTTATGAGAAT
GGAACAACAGCAGTCCCAGAACGGAACTGCAGCTGAGAACGACAATCTCC
GGAAATCAGAACTGGATGAACTGCGTAAATTGAAGTCTTCTGTTAGTGAA
ACTATCGAGGCTAAACATGTCAGAATGGGTGGAATCTTTCCTCATCTTGT
GGCGCAAAAGAGATGAATGCCTGCCTCTGTAGAGCCCGAAGACCAGACAT
ATGTCCTCTCCCACCGTTCCAAGCAAACGGAAGAACACGAACGGCTGAAC
CGACAGCACAACCTCATCCAGCAGACGTTTCTCAACAATCAGCTCATCCA
CCCTTCCATTCCGCTGTCGTCTCTAACGGGTGGAATCGCTGACATTGGCT
GCGGGACAGGTATTTGGCTGCACGAAGTAGCTCAGTCCTTACCGTCCCCA
GGCGGGGCTACTGCATCCCAAACCACAACCACTTTCCCATCTCTTGTTGG
CTTTGACTTGAACGCGGCCGCATTCCCCGAGAACCCCAAACTGGGAATCC
AACTTGTGCAGCACGACTGCACCAAACCTTTCGACGCCCGCTATCATGGG
CAATTTGACCTGGTCAATATCCGCGGCCTTGCGTATGCAATTACGGAGGA
GAAGCTCTCTCGAGCGCTTGACAATGCATTGCTACTCTTGAGGCCAGGAG
GCTACCTCCAGTGGACAGAAAGCGAAGCCCGACTTTTCAAAGTGTTCCCG
GAAACACCAGATATGCTGAAAGCAATGGAAATCATTGATGTGGAGAGACG
GGCTCGCGATCTAGTACCTTATCTACCACATTTCATGCTGCGACGAATCC
TCTCACTTAAAGGTGATAATGATGAAGATGCTCTCAGTATCCTTCATTTC
AATCTACGTCCCGGAGGGTTCTGTCAGGATGATGTTGATCCAGACGTCTG
CCTCCAATTTTCGGATCTTCTCACAGAGTCGGTCAGCCTTTTCCTGCACT
CTGCCCTTATGAGAATGGAACAACAGCAGTCCCAGAACGGAACTGCAGCT
GAGAACGACAATCTCCGGAAATCAGAACTGGATGAACTGCGTAAATTGAA
GTCTTCTGTTAGTGAAACTATCGAGGCTAAACATGTCAGAATGGGTGGAA
TCTTTCCTCATCTTGTGGCGCAAAAGAGATGAATGCCTGCCTCTGTAGAG
CCCGAAGACCAGACATATGTCCTCTCCCACCGTTCCAAGCAAACGGAAGA
ACACGAACGGCTGAACCGACAGCACAACCTCATCCAGCAGACGTTTCTCA
ACAATCAGCTCATCCACCCTTCCATTCCGCTGTCGTCTCTAACGGGTGGA
ATCGCTGACATTGGCTGCGGGACAGGTATTTGGCTGCACGAAGTAGCTCA
GTCCTTACCGTCCCCAGGCGGGGCTACTGCATCCCAAACCACAACCACTT
TCCCATCTCTTGTTGGCTTTGACTTGAACGCGGCCGCATTCCCCGAGAAC
CCCAAACTGGGAATCCAACTTGTGCAGCACGACTGCACCAAACCTTTCGA
CGCCCGCTATCATGGGCAATTTGACCTGGTCAATATCCGCGGCCTTGCGT
ATGCAATTACGGAGGAGAAGCTCTCTCGAGCGCTTGACAATGCATTGCTA
CTCTTGAGGCCAGGAGGCTACCTCCAGTGGACAGAAAGCGAAGCCCGACT
TTTCAAAGTGTTCCCGGAAACACCAGATATGCTGAAAGCAATGGAAATCA
TTGATGTGGAGAGACGGGCTCGCGATCTAGTACCTTATCTACCACATTTC
ATGCTGCGACGAATCCTCTCACTTAAAGGTGATAATGATGAAGATGCTCT
CAGTATCCTTCATTTCAATCTACGTCCCGGAGGGTTCTGTCAGGATGATG
TTGATCCAGACGTCTGCCTCCAATTTTCGGATCTTCTCACAGAGTCGGTC
AGCCTTTTCCTGCACTCTGCCCTTATGAGAATGGAACAACAGCAGTCCCA
GAACGGAACTGCAGCTGAGAACGACAATCTCCGGAAATCAGAACTGGATG
AACTGCGTAAATTGAAGTCTTCTGTTAGTGAAACTATCGAGGCTAAACAT
GTCAGAATGGGTGGAATCTTTCCTCATCTTGTGGCGCAAAAGAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002314-T1.utr3p1 | KJC3_002314-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2246708..2247855 + |
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