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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2250992..2252663+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002317-T1 ID=KJC3_002317-T1|Name=KJC3_002317-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1672bp|location=Sequence derived from alignment at ch2:2250992..2252663+ (Aspergillus niger KJC3)
TTTGTCACAGGCCCTTGTCGAGTATTTGCAGGCGAATCCTTCGGCCCCCA
CACTCAGTCTGCTTCAGCCGACGGTGTCGACAGCTCTGTGGCAGTCGTGG
TGTGCCTCTGATCCTGGCGTATGGGGGCTATACAGTCGCTACAGTCAGAC
AGACGGTGGCAGACAAATGATGGGCTAACTTAGCATTGATTCAGCCTGGC
AGTCTTCCGCTCCTTTCACGCATCAGCCAAGGCAAGATGTGCATGATGCT
CTTCCCAAGTCATTATAAGGGGATGTTTTTTGACTGTCGCGCCTCTGCCA
TCATCGTTGCTCGTTTTTCTCTTTCTCCTTACCACTTGTCTGCAAGCTAA
TTCAGCAAGATGTTGTATTATGAGGGCCATGGTATTACTAGTACGGCCAA
GGCGATCATCATTGTGACCACAATTCTAGGCGTCCTGGCTATCTTTGCCG
TTGCACTTCGCGTCTACGCCCGGATATACTCCAAGCTCTACTTGTGTGCC
GATGACTGGACGATTATCCTCGCCCTGGTACAGTCCCCAGATCCATCACC
ATTCACCCTATCATTCATGCTGCTAATATCCAGTGTTTTTACCTAGATTC
TTTCTTGCGGTATTAGCATTATCATCGACTATACAGATGCTGTTACCGGC
ATTGGAGACCCGGAGTATCAGCCAACCATGGAGGCTATCATATTCGCATT
GAAGATAAACTTCGCTTGCGAAAATGCTCAAATCGCCACTATGGGGGTCA
TCAAAGTCTCTTTGCTCTTCTTCTACCGGCGCATCTTCGGCATTTCCCGT
CCGTTTGTCATAGCGAGCAATGTGCTCATTGCGCTGATCTCCAGCTTCAC
CTTGGCAATTGTATTGGCTGTCATCTTCTCAAAATGGCCAGTCTACCTGC
AATGGGATCCCACCGCTCCTTACGATATTAACGCGTCCGCGATTCTTATC
TGCTACGTTGCTGGGAACAGCTTGTTTGATCTTCTGACGCTGGCTCTTCC
AATTGCCGCTGTACAGAAATTGCAGATGGATCAGTCAAAGAAACTGTTTA
TGTCTGTGATCTTTGTCTTGGGAAGCACGTAAGTTGACACCCCTTTCAAA
TGTTCTGTCAGATAATTAATTATTGTGGTGAAATAGCTGCATGGCGGCAT
CACTCGTTCGACTGTACTACGCCGTTCAGTGGACTAAAGAGCCCGCGACT
ATCACTAGCATGTTTGAGGGTATGTTTTCCTGATTCATATCGCCTTCAAC
TCTTATCGTACACGTTTGCTAACGAGATATCTGATCCGTTTTAGTACCCT
TCATTTACAATATCCTCTGGGCGCTTCTCGAGCCACCCATCTTTATTGTC
GTGGGCTCAATGCTTACACTGGGACCTCTGCTCCGTAACTGGCGAGGACC
CAAGCAATGGATTCGCCTGCTCAGTAGCAAGAAGGAGGGATCGACGAAGT
TCCACGATTCGCGCAGCCTTCCCCAGTCACATATGCAGTCGGGAAGCTCT
CATCAGCGTGGGCCTGAGAAGAAATTGACTCCAAGTACCTCAAGCGAGGT
TGAACTCTTGGAGGTATGAAAGTATCTGCTCGGTCAGGAAGTCTTTGGAA
ATTTTGAATTTATTATCATCATCATCGTTGAAGTTTGTAGTGTTAGTGTT
TGTTACCAAAACTATCTTGTGG back to topCoding sequence (CDS) from alignment at ch2:2250992..2252663+ >KJC3_002317-T1 ID=KJC3_002317-T1|Name=KJC3_002317-T1|organism=Aspergillus niger KJC3|type=CDS|length=4032bp|location=Sequence derived from alignment at ch2:2250992..2252663+ (Aspergillus niger KJC3)
ATGTTGTATTATGAGGGCCATGGTATTACTAGTACGGCCAAGGCGATCAT
CATTGTGACCACAATTCTAGGCGTCCTGGCTATCTTTGCCGTTGCACTTC
GCGTCTACGCCCGGATATACTCCAAGCTCTACTTGTGTGCCGATGACTGG
ACGATTATCCTCGCCCTGATTCTTTCTTGCGGTATTAGCATTATCATCGA
CTATACAGATGCTGTTACCGGCATTGGAGACCCGGAGTATCAGCCAACCA
TGGAGGCTATCATATTCGCATTGAAGATAAACTTCGCTTGCGAAAATGCT
CAAATCGCCACTATGGGGGTCATCAAAGTCTCTTTGCTCTTCTTCTACCG
GCGCATCTTCGGCATTTCCCGTCCGTTTGTCATAGCGAGCAATGTGCTCA
TTGCGCTGATCTCCAGCTTCACCTTGGCAATTGTATTGGCTGTCATCTTC
TCAAAATGGCCAGTCTACCTGCAATGGGATCCCACCGCTCCTTACGATAT
TAACGCGTCCGCGATTCTTATCTGCTACGTTGCTGGGAACAGCTTGTTTG
ATCTTCTGACGCTGGCTCTTCCAATTGCCGCTGTACAGAAATTGCAGATG
GATCAGTCAAAGAAACTGTTTATGTCTGTGATCTTTGTCTTGGGAAGCAC
CTGCATGGCGGCATCACTCGTTCGACTGTACTACGCCGTTCAGTGGACTA
AAGAGCCCGCGACTATCACTAGCATGTTTGAGGTACCCTTCATTTACAAT
ATCCTCTGGGCGCTTCTCGAGCCACCCATCTTTATTGTCGTGGGCTCAAT
GCTTACACTGGGACCTCTGCTCCGTAACTGGCGAGGACCCAAGCAATGGA
TTCGCCTGCTCAGTAGCAAGAAGGAGGGATCGACGAAGTTCCACGATTCG
CGCAGCCTTCCCCAGTCACATATGCAGTCGGGAAGCTCTCATCAGCGTGG
GCCTGAGAAGAAATTGACTCCAAGTACCTCAAGCGAGGTTGAACTCTTGG
AGGTATGAATGTTGTATTATGAGGGCCATGGTATTACTAGTACGGCCAAG
GCGATCATCATTGTGACCACAATTCTAGGCGTCCTGGCTATCTTTGCCGT
TGCACTTCGCGTCTACGCCCGGATATACTCCAAGCTCTACTTGTGTGCCG
ATGACTGGACGATTATCCTCGCCCTGATTCTTTCTTGCGGTATTAGCATT
ATCATCGACTATACAGATGCTGTTACCGGCATTGGAGACCCGGAGTATCA
GCCAACCATGGAGGCTATCATATTCGCATTGAAGATAAACTTCGCTTGCG
AAAATGCTCAAATCGCCACTATGGGGGTCATCAAAGTCTCTTTGCTCTTC
TTCTACCGGCGCATCTTCGGCATTTCCCGTCCGTTTGTCATAGCGAGCAA
TGTGCTCATTGCGCTGATCTCCAGCTTCACCTTGGCAATTGTATTGGCTG
TCATCTTCTCAAAATGGCCAGTCTACCTGCAATGGGATCCCACCGCTCCT
TACGATATTAACGCGTCCGCGATTCTTATCTGCTACGTTGCTGGGAACAG
CTTGTTTGATCTTCTGACGCTGGCTCTTCCAATTGCCGCTGTACAGAAAT
TGCAGATGGATCAGTCAAAGAAACTGTTTATGTCTGTGATCTTTGTCTTG
GGAAGCACCTGCATGGCGGCATCACTCGTTCGACTGTACTACGCCGTTCA
GTGGACTAAAGAGCCCGCGACTATCACTAGCATGTTTGAGGTACCCTTCA
TTTACAATATCCTCTGGGCGCTTCTCGAGCCACCCATCTTTATTGTCGTG
GGCTCAATGCTTACACTGGGACCTCTGCTCCGTAACTGGCGAGGACCCAA
GCAATGGATTCGCCTGCTCAGTAGCAAGAAGGAGGGATCGACGAAGTTCC
ACGATTCGCGCAGCCTTCCCCAGTCACATATGCAGTCGGGAAGCTCTCAT
CAGCGTGGGCCTGAGAAGAAATTGACTCCAAGTACCTCAAGCGAGGTTGA
ACTCTTGGAGGTATGAATGTTGTATTATGAGGGCCATGGTATTACTAGTA
CGGCCAAGGCGATCATCATTGTGACCACAATTCTAGGCGTCCTGGCTATC
TTTGCCGTTGCACTTCGCGTCTACGCCCGGATATACTCCAAGCTCTACTT
GTGTGCCGATGACTGGACGATTATCCTCGCCCTGATTCTTTCTTGCGGTA
TTAGCATTATCATCGACTATACAGATGCTGTTACCGGCATTGGAGACCCG
GAGTATCAGCCAACCATGGAGGCTATCATATTCGCATTGAAGATAAACTT
CGCTTGCGAAAATGCTCAAATCGCCACTATGGGGGTCATCAAAGTCTCTT
TGCTCTTCTTCTACCGGCGCATCTTCGGCATTTCCCGTCCGTTTGTCATA
GCGAGCAATGTGCTCATTGCGCTGATCTCCAGCTTCACCTTGGCAATTGT
ATTGGCTGTCATCTTCTCAAAATGGCCAGTCTACCTGCAATGGGATCCCA
CCGCTCCTTACGATATTAACGCGTCCGCGATTCTTATCTGCTACGTTGCT
GGGAACAGCTTGTTTGATCTTCTGACGCTGGCTCTTCCAATTGCCGCTGT
ACAGAAATTGCAGATGGATCAGTCAAAGAAACTGTTTATGTCTGTGATCT
TTGTCTTGGGAAGCACCTGCATGGCGGCATCACTCGTTCGACTGTACTAC
GCCGTTCAGTGGACTAAAGAGCCCGCGACTATCACTAGCATGTTTGAGGT
ACCCTTCATTTACAATATCCTCTGGGCGCTTCTCGAGCCACCCATCTTTA
TTGTCGTGGGCTCAATGCTTACACTGGGACCTCTGCTCCGTAACTGGCGA
GGACCCAAGCAATGGATTCGCCTGCTCAGTAGCAAGAAGGAGGGATCGAC
GAAGTTCCACGATTCGCGCAGCCTTCCCCAGTCACATATGCAGTCGGGAA
GCTCTCATCAGCGTGGGCCTGAGAAGAAATTGACTCCAAGTACCTCAAGC
GAGGTTGAACTCTTGGAGGTATGAATGTTGTATTATGAGGGCCATGGTAT
TACTAGTACGGCCAAGGCGATCATCATTGTGACCACAATTCTAGGCGTCC
TGGCTATCTTTGCCGTTGCACTTCGCGTCTACGCCCGGATATACTCCAAG
CTCTACTTGTGTGCCGATGACTGGACGATTATCCTCGCCCTGATTCTTTC
TTGCGGTATTAGCATTATCATCGACTATACAGATGCTGTTACCGGCATTG
GAGACCCGGAGTATCAGCCAACCATGGAGGCTATCATATTCGCATTGAAG
ATAAACTTCGCTTGCGAAAATGCTCAAATCGCCACTATGGGGGTCATCAA
AGTCTCTTTGCTCTTCTTCTACCGGCGCATCTTCGGCATTTCCCGTCCGT
TTGTCATAGCGAGCAATGTGCTCATTGCGCTGATCTCCAGCTTCACCTTG
GCAATTGTATTGGCTGTCATCTTCTCAAAATGGCCAGTCTACCTGCAATG
GGATCCCACCGCTCCTTACGATATTAACGCGTCCGCGATTCTTATCTGCT
ACGTTGCTGGGAACAGCTTGTTTGATCTTCTGACGCTGGCTCTTCCAATT
GCCGCTGTACAGAAATTGCAGATGGATCAGTCAAAGAAACTGTTTATGTC
TGTGATCTTTGTCTTGGGAAGCACCTGCATGGCGGCATCACTCGTTCGAC
TGTACTACGCCGTTCAGTGGACTAAAGAGCCCGCGACTATCACTAGCATG
TTTGAGGTACCCTTCATTTACAATATCCTCTGGGCGCTTCTCGAGCCACC
CATCTTTATTGTCGTGGGCTCAATGCTTACACTGGGACCTCTGCTCCGTA
ACTGGCGAGGACCCAAGCAATGGATTCGCCTGCTCAGTAGCAAGAAGGAG
GGATCGACGAAGTTCCACGATTCGCGCAGCCTTCCCCAGTCACATATGCA
GTCGGGAAGCTCTCATCAGCGTGGGCCTGAGAAGAAATTGACTCCAAGTA
CCTCAAGCGAGGTTGAACTCTTGGAGGTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002317-T1.utr5p1 | KJC3_002317-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002317-T1.utr3p1 | KJC3_002317-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2250992..2252663 + |
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