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KJC3_002318-T1, KJC3_002318-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002318-T1
Unique NameKJC3_002318-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2253134..2254154+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002318-T1 ID=KJC3_002318-T1|Name=KJC3_002318-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1021bp|location=Sequence derived from alignment at ch2:2253134..2254154+ (Aspergillus niger KJC3)
ACTGAACTAATTTTCCCTACTACATACTACATTAATCCCCTTTTATTTTC
TTGTCTTAGTACCACTACTCCCCTGAACAATAATGACCATCTCCACCGAC
AAGAAGAAGCCCGCCCTGGTCGTCGTGCCCGGTGCCTCCCAGAACCCAGC
ACACTACGCCCACCTCCTCCACCTCCTCCAATCCGCCGGCTACGGCGCCT
TCACTGGCCTTCTTCCCAGCATTGGCGCCCAGGGAGAGGTCACGGCCGCC
GACGACGCCGACTACGTGCGAAACCGACTGATCCTCCCCCTCCTGGACGT
CGGCAATCAGGATGTGATCCTGATCAGCCACTCGTACAGTGGAATGCCGG
CTAGCGCGGCGGCGCGCGGACTGGGACCCGCCGACCGTGCCGCTCAGGGC
AAGTCCACTTCCGTGCTCGGCCAGATCTTCATCGCGACGATCCTGCCTCG
TGGTGGTGATGGTCTGAGTGTGATTGACTCTTTTGGCGGTAATTTGCCGC
CGCATATGTATATGGATGTATGTGCCCCTCCCCCTTCCTCCAATTGACCC
GATGACCCATTCATATCTGGTGTTGACGAAATGGGATTATAGAAAGAGCA
AAACCTCCTCAAATGCGACGAGCCCAAGCCCCCTCTCTTCTACGATGTTG
AACCCACCCTTGCCGATGCCGCGACCCAGACTTCCCTGAGTCAGGGCTTG
ACTTCCTTCTCTAGTCCCTGTCCTGAGGCCAGCTGGAACACGGAGGCCTT
TAAAGATAGAATTGCCTACATCCACACCACTGAGGATCGGGCGGTGCCCT
ACCCGGCCCAGACGGCTATGGTTCAGGCTACCGGTGCTAAGTGGATTACC
CGGGAGCTTGCTACGGGTCATAGTGCGCAGTTGTCTGCTCCGGAGGAGTT
GAAGAAGACTATTCTGGAGTTGGTGAAACAGTGGGAATAGATAGATTGAA
AAGAAATTGGGTGTGTATTTAGCTACTTATTTACAATGTTGGTTTGGAAT
GTAACACAATTCGGAAGGTTA
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Coding sequence (CDS) from alignment at ch2:2253134..2254154+

>KJC3_002318-T1 ID=KJC3_002318-T1|Name=KJC3_002318-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch2:2253134..2254154+ (Aspergillus niger KJC3)
ATGACCATCTCCACCGACAAGAAGAAGCCCGCCCTGGTCGTCGTGCCCGG
TGCCTCCCAGAACCCAGCACACTACGCCCACCTCCTCCACCTCCTCCAAT
CCGCCGGCTACGGCGCCTTCACTGGCCTTCTTCCCAGCATTGGCGCCCAG
GGAGAGGTCACGGCCGCCGACGACGCCGACTACGTGCGAAACCGACTGAT
CCTCCCCCTCCTGGACGTCGGCAATCAGGATGTGATCCTGATCAGCCACT
CGTACAGTGGAATGCCGGCTAGCGCGGCGGCGCGCGGACTGGGACCCGCC
GACCGTGCCGCTCAGGGCAAGTCCACTTCCGTGCTCGGCCAGATCTTCAT
CGCGACGATCCTGCCTCGTGGTGGTGATGGTCTGAGTGTGATTGACTCTT
TTGGCGGTAATTTGCCGCCGCATATGTATATGGATAAAGAGCAAAACCTC
CTCAAATGCGACGAGCCCAAGCCCCCTCTCTTCTACGATGTTGAACCCAC
CCTTGCCGATGCCGCGACCCAGACTTCCCTGAGTCAGGGCTTGACTTCCT
TCTCTAGTCCCTGTCCTGAGGCCAGCTGGAACACGGAGGCCTTTAAAGAT
AGAATTGCCTACATCCACACCACTGAGGATCGGGCGGTGCCCTACCCGGC
CCAGACGGCTATGGTTCAGGCTACCGGTGCTAAGTGGATTACCCGGGAGC
TTGCTACGGGTCATAGTGCGCAGTTGTCTGCTCCGGAGGAGTTGAAGAAG
ACTATTCTGGAGTTGGTGAAACAGTGGGAATAGATGACCATCTCCACCGA
CAAGAAGAAGCCCGCCCTGGTCGTCGTGCCCGGTGCCTCCCAGAACCCAG
CACACTACGCCCACCTCCTCCACCTCCTCCAATCCGCCGGCTACGGCGCC
TTCACTGGCCTTCTTCCCAGCATTGGCGCCCAGGGAGAGGTCACGGCCGC
CGACGACGCCGACTACGTGCGAAACCGACTGATCCTCCCCCTCCTGGACG
TCGGCAATCAGGATGTGATCCTGATCAGCCACTCGTACAGTGGAATGCCG
GCTAGCGCGGCGGCGCGCGGACTGGGACCCGCCGACCGTGCCGCTCAGGG
CAAGTCCACTTCCGTGCTCGGCCAGATCTTCATCGCGACGATCCTGCCTC
GTGGTGGTGATGGTCTGAGTGTGATTGACTCTTTTGGCGGTAATTTGCCG
CCGCATATGTATATGGATAAAGAGCAAAACCTCCTCAAATGCGACGAGCC
CAAGCCCCCTCTCTTCTACGATGTTGAACCCACCCTTGCCGATGCCGCGA
CCCAGACTTCCCTGAGTCAGGGCTTGACTTCCTTCTCTAGTCCCTGTCCT
GAGGCCAGCTGGAACACGGAGGCCTTTAAAGATAGAATTGCCTACATCCA
CACCACTGAGGATCGGGCGGTGCCCTACCCGGCCCAGACGGCTATGGTTC
AGGCTACCGGTGCTAAGTGGATTACCCGGGAGCTTGCTACGGGTCATAGT
GCGCAGTTGTCTGCTCCGGAGGAGTTGAAGAAGACTATTCTGGAGTTGGT
GAAACAGTGGGAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002318KJC3_002318Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002318-T1.utr5p1KJC3_002318-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002318-T1.exon1KJC3_002318-T1.exon1Aspergillus niger KJC3exon
KJC3_002318-T1.exon2KJC3_002318-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002318-T1.cdsKJC3_002318-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002318-T1.utr3p1KJC3_002318-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002318-T1KJC3_002318-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2253134..2254154 +
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