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KJC3_002328-T1, KJC3_002328-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002328-T1
Unique NameKJC3_002328-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2278137..2278903+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002328-T1 ID=KJC3_002328-T1|Name=KJC3_002328-T1|organism=Aspergillus niger KJC3|type=mRNA|length=767bp|location=Sequence derived from alignment at ch2:2278137..2278903+ (Aspergillus niger KJC3)
ATGATAACAGTAAGTGCACTCAGTCTTTTGCCACCGACCATCGGACACTG
ACTTTGATTTGCAGTGTATGCAGACTCTGCTTGTCCTACAATCGTCATAT
GCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCG
TTTTAAGGGACCTGAAGAGAGTAAGATCCATACAATTTCCGACTATGGCA
AATCAAACCTGCTGACATAGCCAGCACCCTTCGCCGGTGGCCACTGGAAG
ATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGG
ATTTGTGAACCGGATATTCCACCCGAACATCGATGAGCTGTAAGACAACT
TCGACAAATCTTGTGTCCAACGGCTAACCCCAGCTGCCCAGGTCGGGTTC
CGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGA
TCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCT
TCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAA
GAGCTACGAGGCAAAGGTCAAGGGTACGTTGCCACATCATATGCGACATA
CTTCGTCATATTTAGCTGACATGTCACCAGAGTACGTGGCCAAGTACGCC
AGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCAGAAGACGA
ATTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTA
CGATGGACGACGTCTAA
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Coding sequence (CDS) from alignment at ch2:2278137..2278903+

>KJC3_002328-T1 ID=KJC3_002328-T1|Name=KJC3_002328-T1|organism=Aspergillus niger KJC3|type=CDS|length=2745bp|location=Sequence derived from alignment at ch2:2278137..2278903+ (Aspergillus niger KJC3)
ATGATAACATGTATGCAGACTCTGCTTGTCCTACAATCGTCATATGCACG
ATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTA
AGGGACCTGAAGAGACACCCTTCGCCGGTGGCCACTGGAAGATCCACGTC
GAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAA
CCGGATATTCCACCCGAACATCGATGAGCTGTCGGGTTCCGTTTGTTTGG
ATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTC
GAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCT
CAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGG
CAAAGGTCAAGGAGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGAT
GAAGCCGGGGAAGACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAG
TTACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAA
TGATAACATGTATGCAGACTCTGCTTGTCCTACAATCGTCATATGCACGA
TTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAA
GGGACCTGAAGAGACACCCTTCGCCGGTGGCCACTGGAAGATCCACGTCG
AACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAAC
CGGATATTCCACCCGAACATCGATGAGCTGTCGGGTTCCGTTTGTTTGGA
TGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCG
AGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTC
AACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGC
AAAGGTCAAGGAGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATG
AAGCCGGGGAAGACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGT
TACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAAT
GATAACATGTATGCAGACTCTGCTTGTCCTACAATCGTCATATGCACGAT
TGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAG
GGACCTGAAGAGACACCCTTCGCCGGTGGCCACTGGAAGATCCACGTCGA
ACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACC
GGATATTCCACCCGAACATCGATGAGCTGTCGGGTTCCGTTTGTTTGGAT
GTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCGA
GGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCA
ACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCA
AAGGTCAAGGAGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGA
AGCCGGGGAAGACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTT
ACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAATG
ATAACATGTATGCAGACTCTGCTTGTCCTACAATCGTCATATGCACGATT
GATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGG
GACCTGAAGAGACACCCTTCGCCGGTGGCCACTGGAAGATCCACGTCGAA
CTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACCG
GATATTCCACCCGAACATCGATGAGCTGTCGGGTTCCGTTTGTTTGGATG
TCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCGAG
GTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAA
CGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAA
AGGTCAAGGAGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAA
GCCGGGGAAGACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTA
CGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAATGA
TAACATGTATGCAGACTCTGCTTGTCCTACAATCGTCATATGCACGATTG
ATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGG
ACCTGAAGAGACACCCTTCGCCGGTGGCCACTGGAAGATCCACGTCGAAC
TACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACCGG
ATATTCCACCCGAACATCGATGAGCTGTCGGGTTCCGTTTGTTTGGATGT
CATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCGAGG
TCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAAC
GGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAAA
GGTCAAGGAGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAG
CCGGGGAAGACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTAC
GAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC8KJC3_002328Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002328-T1KJC3_002328-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002328-T1.exon1KJC3_002328-T1.exon1Aspergillus niger KJC3exon
KJC3_002328-T1.exon2KJC3_002328-T1.exon2Aspergillus niger KJC3exon
KJC3_002328-T1.exon3KJC3_002328-T1.exon3Aspergillus niger KJC3exon
KJC3_002328-T1.exon4KJC3_002328-T1.exon4Aspergillus niger KJC3exon
KJC3_002328-T1.exon5KJC3_002328-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002328-T1.cdsKJC3_002328-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264Z1B
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2278137..2278903 +
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