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KJC3_002329-T1, KJC3_002329-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002329-T1
Unique NameKJC3_002329-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2279770..2281154-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002329-T1 ID=KJC3_002329-T1|Name=KJC3_002329-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1385bp|location=Sequence derived from alignment at ch2:2279770..2281154- (Aspergillus niger KJC3)
CATAAATCTAGTATTTGAGGCCATTGCTGCTTGCACTTTGAAGATGGTTG
ATCAGAGATAGATTTCAATGACTATCATTCAGGACATTCCAGGGCACTCA
TAATACTTGTACCCGATTCCGATGACATCGGCTCGCACGGGCCACTCCCA
ACCCACCGAATTATCCAAACCGTCACTCCTTCAAGTCAGTGACCCAAGAT
CTCAATCACCCACCCAACCAACCTTGCATTCCACCTTCGCAAATCATCTC
CGCTTGAGCATCACCGCCCGGCGCGTTTTTACATCCAATTCAACATCCAG
ACGCTCATTCCAGTCATTCATTCGCCTCGCACTTTTTTCACCAGAGCCCG
ACACTACTACCGTTCATAATCAAGCCGTTCCAACCACTACCACCTACCGT
CACTGAACATCTCTCCTGCGCCTCCACCTCTATTCCGCCGATCTGATCAG
CACAAATGGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCC
CACGATGTAAGTTCAATCCTATAGTCCTTTACCGAAAAACAAGCGCACGC
AACCAACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCGC
ATCCATCATCTAGATGCCAAAACTAACTTATCTCCATCACCACAGCCCAA
CCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCT
ACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCAGATCCG
AGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCAGCGGAC
ATCAGAGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAGT
CCAATACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCGCTCCA
ACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCC
CTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACGACC
GACTCGACACCGGCTCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGC
GGGCGGCACGGTCCCGAAACATTGGGGCGAGGTGGTGATAAATACGCGCA
AGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAG
AGAGATGTGTTTGGAGTGTTGAAGGTTACATGATTGATATAACTATTTAA
AATGGGGGAGGTTGCGCAGATGATGGCAGGTCAAATGTGATAGGTGTCGT
GTGGTGTTGTGTTACCGGGGGCGCTACTACTAGATGAAACACGGCAAGGA
AGTGGATGGACGGACTTCTGGACGAACGTGATGGACAGGCGTGACAACAC
TTATCGCATTTGACTTGACGTGTTTGATTGTTTTT
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Coding sequence (CDS) from alignment at ch2:2279770..2281154-

>KJC3_002329-T1 ID=KJC3_002329-T1|Name=KJC3_002329-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch2:2279770..2281154- (Aspergillus niger KJC3)
TTCCGTTATCGACATCTGGTCGCTCCAACCCCAACCGCATCTCCAACCTC
GCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGATGGCGAT
GCGCCGCCCGTGAAAGTAATAACGACCGACTCGACACCGGCTCGTTCAAA
GAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGAAACATT
GGGGCGAGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCTGGGTCG
AGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAA
GGTTACATGACCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACA
TCTACCAACCGGGCTACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGC
AACCACCCAGATCCGAGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGC
AATCTGCCAGCGGACATCAGAATGGGTATCTGCGCCTCATGTCTCGGACG
TAATCGTCAGGAACCCCACGATTTCCGTTATCGACATCTGGTCGCTCCAA
CCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCC
TCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACGACCG
ACTCGACACCGGCTCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCG
GGCGGCACGGTCCCGAAACATTGGGGCGAGGTGGTGATAAATACGCGCAA
GAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGA
GAGATGTGTTTGGAGTGTTGAAGGTTACATGACCCAACCACCCCGAATCT
TCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGC
CCTTCACCAAAGCACCCAAGGCAACCACCCAGATCCGAGCTACCTGAAGC
GCGAACGAGAAGCCCTTGAAGCAATCTGCCAGCGGACATCAGAATGGGTA
TCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGATTTCCGT
TATCGACATCTGGTCGCTCCAACCCCAACCGCATCTCCAACCTCGCGCCA
CCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGATGGCGATGCGCCG
CCCGTGAAAGTAATAACGACCGACTCGACACCGGCTCGTTCAAAGAAACA
TTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGAAACATTGGGGCG
AGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCTGGGTCGAGTACG
GACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAAGGTTAC
ATGACCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACC
AACCGGGCTACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCAC
CCAGATCCGAGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTG
CCAGCGGACATCAGAATGGGTATCTGCGCCTCATGTCTCGGACGTAATCG
TCAGGAACCCCACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031902late endosome membrane
GO:0045121membrane raft
GO:0071986Ragulator complex
Vocabulary: Biological Process
TermDefinition
GO:0016197endosomal transport
GO:0071230cellular response to amino acid stimulus
GO:0042632cholesterol homeostasis
GO:0007040lysosome organization
GO:0032008positive regulation of TOR signaling
GO:0001919regulation of receptor recycling
GO:0043410positive regulation of MAPK cascade
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002329KJC3_002329Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002329-T1KJC3_002329-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002329-T1.cdsKJC3_002329-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002329-T1.utr3p1KJC3_002329-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002329-T1.exon3KJC3_002329-T1.exon3Aspergillus niger KJC3exon
KJC3_002329-T1.exon2KJC3_002329-T1.exon2Aspergillus niger KJC3exon
KJC3_002329-T1.exon1KJC3_002329-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002329-T1.utr5p1KJC3_002329-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR028209
DBxrefPFAM:PF15454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2279770..2281154 -
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