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KJC3_002336-T1, KJC3_002336-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002336-T1
Unique NameKJC3_002336-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2295260..2296155-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002336-T1 ID=KJC3_002336-T1|Name=KJC3_002336-T1|organism=Aspergillus niger KJC3|type=mRNA|length=896bp|location=Sequence derived from alignment at ch2:2295260..2296155- (Aspergillus niger KJC3)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTAAGGAACAATGGCAACAATTCATA
GCAGCGGCGTCGGAAAGCGGAGCGAGACTGACATCTGAGTGCTAGGTGAA
TTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCT
TCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTG
CTATGTGGGGTGCGTAACTCCGTTGGAATTAAGTTTACTGTTGAATTATA
GTTGACGGGAGATTGTCTCTAGGAACCATGCGCGCCCACCTACAGAACCA
CATCCTCGGAGTGTCGGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTG
TTGGTTACAGAGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAA
TACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGAT
TGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTC
GTATCCTGTTGGAGAGCGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCG
GAGATCCGCGAATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTT
CGTCAACGGGGAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Coding sequence (CDS) from alignment at ch2:2295260..2296155-

>KJC3_002336-T1 ID=KJC3_002336-T1|Name=KJC3_002336-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch2:2295260..2296155- (Aspergillus niger KJC3)
GAACCATGCGCGCCCACCTACAGAACCACATCCTCGGAGTGTCGGAAGGT
CACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGA
ACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGT
CCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGC
GTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTTGGAGAGCGTGGA
CAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGC
CGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAG
CTCAAGGACAAGAAGATTCGGTGAGTGAATTGTCGCTGAACATCCCTTCC
TACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGCCACTCTGGCTGT
TCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGGATGTCATGTTAC
TTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCCTTTGAGACAAGG
ACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACCCTCTTCGGACAC
AACCTTTCTCGACCACGTCCCCGGTACAATCGCGAGTTGGCGGCGCCGCG
ATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGACCTCCCTCAGCC
TAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGGCCGTTGAGGTCA
AAGGACCCCTGGGAACCATGCGCGCCCACCTACAGAACCACATCCTCGGA
GTGTCGGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAG
AGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTC
AACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGT
ATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTT
GGAGAGCGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCG
AATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGG
GAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGAGTGAATTGTCGCTG
AACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGC
CACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGG
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGAACCATGCGCGCCCACCTACAGAAC
CACATCCTCGGAGTGTCGGAAGGTCACATTTGCATTCTGAGTTTCGTTGG
TGTTGGTTACAGAGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCC
AATACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCG
ATTGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGAC
TCGTATCCTGTTGGAGAGCGTGGACAAGCAGCTTGTGACCAAGTTCGCGG
CGGAGATCCGCGAATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATC
TTCGTCAACGGGGAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGAGT
GAATTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGC
CCTTCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGC
GTGCTATGTGGGATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCT
TGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCG
CTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTA
CAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCT
GAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACT
TCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002336KJC3_002336Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002336-T1KJC3_002336-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002336-T1.cdsKJC3_002336-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002336-T1.exon3KJC3_002336-T1.exon3Aspergillus niger KJC3exon
KJC3_002336-T1.exon2KJC3_002336-T1.exon2Aspergillus niger KJC3exon
KJC3_002336-T1.exon1KJC3_002336-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR002358
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR020040
DBxrefInterPro:IPR019906
DBxrefPFAM:PF00347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2295260..2296155 -
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