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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2298861..2300983+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002338-T1 ID=KJC3_002338-T1|Name=KJC3_002338-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2123bp|location=Sequence derived from alignment at ch2:2298861..2300983+ (Aspergillus niger KJC3)
CCCAGCCTCGCCGATCTCGACCTCAATTGTCTGGAGAATATCTGTGATCA
GGCGAATAAATCTCTATACTGTACGTGCTTTATCCCTACACTGTCATTTA
CATCTATCCTTCCCGGAGGCATCAATCGCAACCCCCGCAGCAAACGTCTC
CGATCCACACGCAGACCGCCTTCGCAGCTGGAGCCGACATCTGGGGTTGC
GGTGTTCACCCCCAGAGCGCCACGTTTGAAGCAAGGTTAGCTGGCTTGTT
CTTCCCGAGACATTGTTGGGTTTGGCGCAGGGGGTGGTTGCACACTCTGA
AGGTGGTGTGAGCTCCTGCTCGTTGGAAGATCGAACAGGATGGGTTCCCT
TTCTGCCTGGCGATAAGCTGACTTGCTCCCCGCGACTAGCGTTGAGCCTT
GATCGCTGGTTCACCACTTGAGCTACCACGGATCGCTTTTATTGGTCGTA
TCGTCCGGCATCGTGAGCGCGTACAGTCGCATCGAACCCGCGATCGGAGC
GCACCCAGCTTTTTCTCTACCACGTCACACACAATAATGACCGATCCAAC
CTCCGACGCACCTGCTATGGACGAGTTCGCGCAGACTCGAGGTGGTGATG
ACCTCTTTGACGATGAGATTGTCCCTGTCCCCGCCGCAGAACAGCAACCT
CAGCCCGAAGTGCACGCGGAACCTTCCCCCGCTCCTGTTGTCGAAAGCGA
TGCGCAACCAGCTCGAACTGATACCCCGTCATCACGGTCGCGTGGAGGTG
AAAGGCGAGGACGGGGTCGAGGCAGAGGACGTGGTGGGCGGGGGTCGCAC
AATGGAGGCCGTCGGGGGGAAGGGCCTGTGAAGAACAAGCCCGTTGAGAG
TGCTCCTGAGCATGAGAATAAGAGTGGCGAAGGGTCGACTCCGGAGACGC
CGGCTGAGGGAGATCAGAATGGAAAAGAGGAGACAACGGCAGCGGACCCT
AAACAGGCTGCTGCTGCAGAGGGCCCGCGCGTGCCTGCGGTTCGCGGAGA
CAGAAGTGCTACAGGTGGCTTAAAGAAGGTAGAGGCATCTGCGAATTCTA
GATGTATGCTTGCTAACTCGCTACCAGCCGAAACTTACGGAAGAAGAACT
CTCCCGTCGTATTGCTGCCGCCAAAGAAAACGCTGCCAAAGTTGCCGCTG
CACATGCTCGGGCTGAGGCAGACCAGGCCTCGTTTCTTGAGCGCGAGAAG
GTTGCCGAAGAGAAGCGACGCCAGGAACGCCAGCATCGCCGGGCCATGGA
CAATGAGCGGGAGCGTAACCGACTGCGCAAACTGGGTGCCTTGAACGGAA
GGGAGTGGGACGCCGAGAAGAAGGAGGAACATTACAATCCCCGTGGTGGC
AGGGGTGGCTTCCGACGAGGTATGCATGGTGGTGTGTCTGGATATGCCCG
GCGAGACTTTGATTCCCAGCCCAGCGAAGAGCCCAGTGAAGACGCTCGTC
CTCCTTACCATCGCGGCCGCGGACGTGGTGGTGGTGGAGGTGGTAGAGGT
GGCCGTGGCCGCGGTGGACATCGCGGGCCTCGAGGAGACATTGCAGCGTC
CGATGGTGCTGCTGATCAAACTTCTGGCCACACTAAGTCTGAAGCATCTG
CCCCAGTCATCAGTAATGAGGCTGAGTTCCCTGCTCTACCTGGGAGTGAG
AAGAAGGAGAAGGAGAAGGCCGGTGAGGAAGCGCCCACTACTCCTGATTT
GCTCAAGTCGGACTCCTTGTCACCAGTGACGGGGGCTTCCTGGGCCGATC
AAGTCGAATCTCAGTAATTATACATTTACGAATCAGCCTGCTTTCCTATT
CATTATGATATGATTCCAACTCTAATCTGCGCCAAAGACACATGAACCAT
GCACTCATATTCCCCTAAACAGTACTTGTTGCTTGCTTCGATACGATATC
ATTCGAATGGCCTACTAGAGCCTTCCCCTCACTATGCGTCTTTTCCAATA
TCCTTATCCTTCAGAGATGAAGGCTTTGCTTACACCTGCTTGGTTAGCTA
TGACGTTATGTACATACCTACCGCACCGCAATAGAGGCGAGTCCCATCCG
ACTGCCTGGGGTATACGGATAAGCCGTACTAGATAGGACATAATCTGCAT
GAACTATGCGATCATCAATCAGC back to topCoding sequence (CDS) from alignment at ch2:2298861..2300983+ >KJC3_002338-T1 ID=KJC3_002338-T1|Name=KJC3_002338-T1|organism=Aspergillus niger KJC3|type=CDS|length=2364bp|location=Sequence derived from alignment at ch2:2298861..2300983+ (Aspergillus niger KJC3)
ATGACCGATCCAACCTCCGACGCACCTGCTATGGACGAGTTCGCGCAGAC
TCGAGGTGGTGATGACCTCTTTGACGATGAGATTGTCCCTGTCCCCGCCG
CAGAACAGCAACCTCAGCCCGAAGTGCACGCGGAACCTTCCCCCGCTCCT
GTTGTCGAAAGCGATGCGCAACCAGCTCGAACTGATACCCCGTCATCACG
GTCGCGTGGAGGTGAAAGGCGAGGACGGGGTCGAGGCAGAGGACGTGGTG
GGCGGGGGTCGCACAATGGAGGCCGTCGGGGGGAAGGGCCTGTGAAGAAC
AAGCCCGTTGAGAGTGCTCCTGAGCATGAGAATAAGAGTGGCGAAGGGTC
GACTCCGGAGACGCCGGCTGAGGGAGATCAGAATGGAAAAGAGGAGACAA
CGGCAGCGGACCCTAAACAGGCTGCTGCTGCAGAGGGCCCGCGCGTGCCT
GCGGTTCGCGGAGACAGAAGTGCTACAGGTGGCTTAAAGAAGCCGAAACT
TACGGAAGAAGAACTCTCCCGTCGTATTGCTGCCGCCAAAGAAAACGCTG
CCAAAGTTGCCGCTGCACATGCTCGGGCTGAGGCAGACCAGGCCTCGTTT
CTTGAGCGCGAGAAGGTTGCCGAAGAGAAGCGACGCCAGGAACGCCAGCA
TCGCCGGGCCATGGACAATGAGCGGGAGCGTAACCGACTGCGCAAACTGG
GTGCCTTGAACGGAAGGGAGTGGGACGCCGAGAAGAAGGAGGAACATTAC
AATCCCCGTGGTGGCAGGGGTGGCTTCCGACGAGGTATGCATGGTGGTGT
GTCTGGATATGCCCGGCGAGACTTTGATTCCCAGCCCAGCGAAGAGCCCA
GTGAAGACGCTCGTCCTCCTTACCATCGCGGCCGCGGACGTGGTGGTGGT
GGAGGTGGTAGAGGTGGCCGTGGCCGCGGTGGACATCGCGGGCCTCGAGG
AGACATTGCAGCGTCCGATGGTGCTGCTGATCAAACTTCTGGCCACACTA
AGTCTGAAGCATCTGCCCCAGTCATCAGTAATGAGGCTGAGTTCCCTGCT
CTACCTGGGAGTGAGAAGAAGGAGAAGGAGAAGGCCGGTGAGGAAGCGCC
CACTACTCCTGATTTGCTCAAGTCGGACTCCTTGTCACCAGTGACGGGGG
CTTCCTGGGCCGATCAAGTCGAATCTCAGTAAATGACCGATCCAACCTCC
GACGCACCTGCTATGGACGAGTTCGCGCAGACTCGAGGTGGTGATGACCT
CTTTGACGATGAGATTGTCCCTGTCCCCGCCGCAGAACAGCAACCTCAGC
CCGAAGTGCACGCGGAACCTTCCCCCGCTCCTGTTGTCGAAAGCGATGCG
CAACCAGCTCGAACTGATACCCCGTCATCACGGTCGCGTGGAGGTGAAAG
GCGAGGACGGGGTCGAGGCAGAGGACGTGGTGGGCGGGGGTCGCACAATG
GAGGCCGTCGGGGGGAAGGGCCTGTGAAGAACAAGCCCGTTGAGAGTGCT
CCTGAGCATGAGAATAAGAGTGGCGAAGGGTCGACTCCGGAGACGCCGGC
TGAGGGAGATCAGAATGGAAAAGAGGAGACAACGGCAGCGGACCCTAAAC
AGGCTGCTGCTGCAGAGGGCCCGCGCGTGCCTGCGGTTCGCGGAGACAGA
AGTGCTACAGGTGGCTTAAAGAAGCCGAAACTTACGGAAGAAGAACTCTC
CCGTCGTATTGCTGCCGCCAAAGAAAACGCTGCCAAAGTTGCCGCTGCAC
ATGCTCGGGCTGAGGCAGACCAGGCCTCGTTTCTTGAGCGCGAGAAGGTT
GCCGAAGAGAAGCGACGCCAGGAACGCCAGCATCGCCGGGCCATGGACAA
TGAGCGGGAGCGTAACCGACTGCGCAAACTGGGTGCCTTGAACGGAAGGG
AGTGGGACGCCGAGAAGAAGGAGGAACATTACAATCCCCGTGGTGGCAGG
GGTGGCTTCCGACGAGGTATGCATGGTGGTGTGTCTGGATATGCCCGGCG
AGACTTTGATTCCCAGCCCAGCGAAGAGCCCAGTGAAGACGCTCGTCCTC
CTTACCATCGCGGCCGCGGACGTGGTGGTGGTGGAGGTGGTAGAGGTGGC
CGTGGCCGCGGTGGACATCGCGGGCCTCGAGGAGACATTGCAGCGTCCGA
TGGTGCTGCTGATCAAACTTCTGGCCACACTAAGTCTGAAGCATCTGCCC
CAGTCATCAGTAATGAGGCTGAGTTCCCTGCTCTACCTGGGAGTGAGAAG
AAGGAGAAGGAGAAGGCCGGTGAGGAAGCGCCCACTACTCCTGATTTGCT
CAAGTCGGACTCCTTGTCACCAGTGACGGGGGCTTCCTGGGCCGATCAAG
TCGAATCTCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002338-T1.utr3p1 | KJC3_002338-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2298861..2300983 + |
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