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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2302176..2304313- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002340-T1 ID=KJC3_002340-T1|Name=KJC3_002340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2138bp|location=Sequence derived from alignment at ch2:2302176..2304313- (Aspergillus niger KJC3)
GCGACATCGGTGCCATGATCTGGACACTTTGACGCTTGATACATCTTATG
CAGGCTTGATACAGTCGCGAGGCCCGGTCAGCCTGTTAATTAGCTTTGCT
TGACCCAAAACGCAATCGTCCGTTCTTCTCCGCCGCTCGGAGAGCTGAAC
TTACACTCCGTGTATGGCTTGCTAGCGGTAGTGAGGTACGCGAAAGAATA
ACTACACAGGATCTAGAACTTTCCGCATCGGCAAGCATGACGTGATGACG
GTCCTCTCTCTCCTTACCTTACTTTTCGTTGTCGCGCTCTCTTCGTTCAC
ATCGGCGACTTCGGACTACCACGAGAGCCTCTACCTCCAGCCACTCCCGC
AGTCATCCCTGTTAGCATCCTTCAACTTTCGAGGCAATGAGTCCCAAGAG
TCCTTCGATGAACGGCATTTCCGCTATTTTCCGAGAGCCTTAGGCCAGAT
TTTACAGCACGCCAATACGAAGGAGCTCCATCTGCGGTTCACTACTGGAC
GATGGGATGCTGAGAGCTGGGGTCCTCGTCCTTGGAATGGGACCAAAGAG
GGCGGTACTGGTGTTGAGCTATGGGCCTGGATCGATGCACCTGATGACGA
AGCGTACGTGTGAACGGAAAGGAAGACGCGAGTTTGTATGTGCAACGATA
CTGATGGGCATTAGGGCCTTCGCGAAATGGATTACCCTGACTCAGTCTCT
GTCGGGATTGTTTTGCGCCTCGCTGAACTTCATCGACTCAACCCGAACTA
CTCGCCCAGTCACGTCGTTTGAACTCATGGGCGACCATCCGGCTTCAAGT
AATCTGCATCTGCTGCACGGGACACTTCCCGGCGAGGTGGTCTGCACTGA
AAATCTGACACCATTCCTGAAGCTCCTACCATGCAAGGGCAAGGCAGGCG
TTTCTAGCCTTCTAGACGGGCATAAACTGTTTGACGCGTCTTGGCAGAGC
ATGTCTGTGGACGTCAGTCCTGTCTGTCCTCACCCTGGAGAGTGCTCCGT
GCATGTCGATCAGTCTGTGGACATTGTTCTGGATATCGACCGGTCAAAAC
GACCACGCGGTTAGTTGAATGGTGCCTGACGCCTTGATTAATATGCTAAT
GGCTACTCAGGCAATCCCATTCCGCGACCTGTACCTTCTGATCAGCTTGC
ATGTGACACATCCAAGCCTTACCATTCCGATGATACCTGCTATCCTTTGG
AAAGCACATCGGAAAAGGGCTGGAGCTTGACGGAAATCTTCGGGCGCACC
CTCAGTGGCGCTTGTCCCCTCACCGATAATACTTCTCAAGAGCCGGTCTG
CCTACGGGTGCCGCATGAGCGCGAGGTGCTTGTCACTCCAGGTGCAGTGG
AGACCAAGAAGACGGATGGCTTCACCCGCTGTTTCACCCTGGAGCCTTCT
ACTCCGTTCGACCTCACCATCCCTGAACAGGAAGTTACCACCCATGTGCC
ACTTGATGAACCTGTCCTAAGCGCAGAGAGAACGATTGTTGGTCACGGCC
AAGAGCGCGGTGGCATGCGGATCATCTTCGACAACCCAAGTAACACCAAC
TCTGTTGACTTCATCTACTTCGAAACTCTACCATGGTTTCTACGACCTTA
TGTCCACACACTGCAAGCTTCAATCACAGGCCGCGATGGACTTCGCCAGC
AAGTACCCGCCTCACACTTCATCCGGGAATCATTCTACCGACCAGCAATC
GACCGCGAACGAGGAACACAGCTAGAGCTGGCATTGACGATACCGCCCGC
ATCGACGGTGACTCTCACATACGACTTTGAGAAAGCGATTCTGCGATACA
CTGAGTATCCTCCAGACGCAAACCGCGGCTTCAACGTCGCTCCCGCCGTG
ATCAAGCTCGACGCAGCAAACGGCCAAAACCACCCGATCTATATCCGCAC
CACCAGCCTTCTTCTACCGCTTCCCACCCCCGATTTCAGCATGCCTTACA
ACGTGATCATCCTGACCAGCACCGTAGTAGCGCTCGCCTTTGGCAGTATC
TTCAACCTCCTCGTCCGTCGATTTGTCACGGCCGAAGAAGCGTCCGCGCT
GACGGCGCAAACCCTCAAGGGACGCCTGGGGGGCAAGTTAGTTGCCCTAC
GGGACCGAATCAAGGGCAAGACAGCCAAGACAGAATAG back to topCoding sequence (CDS) from alignment at ch2:2302176..2304313- >KJC3_002340-T1 ID=KJC3_002340-T1|Name=KJC3_002340-T1|organism=Aspergillus niger KJC3|type=CDS|length=5346bp|location=Sequence derived from alignment at ch2:2302176..2304313- (Aspergillus niger KJC3)
GCAATCCCATTCCGCGACCTGTACCTTCTGATCAGCTTGCATGTGACACA
TCCAAGCCTTACCATTCCGATGATACCTGCTATCCTTTGGAAAGCACATC
GGAAAAGGGCTGGAGCTTGACGGAAATCTTCGGGCGCACCCTCAGTGGCG
CTTGTCCCCTCACCGATAATACTTCTCAAGAGCCGGTCTGCCTACGGGTG
CCGCATGAGCGCGAGGTGCTTGTCACTCCAGGTGCAGTGGAGACCAAGAA
GACGGATGGCTTCACCCGCTGTTTCACCCTGGAGCCTTCTACTCCGTTCG
ACCTCACCATCCCTGAACAGGAAGTTACCACCCATGTGCCACTTGATGAA
CCTGTCCTAAGCGCAGAGAGAACGATTGTTGGTCACGGCCAAGAGCGCGG
TGGCATGCGGATCATCTTCGACAACCCAAGTAACACCAACTCTGTTGACT
TCATCTACTTCGAAACTCTACCATGGTTTCTACGACCTTATGTCCACACA
CTGCAAGCTTCAATCACAGGCCGCGATGGACTTCGCCAGCAAGTACCCGC
CTCACACTTCATCCGGGAATCATTCTACCGACCAGCAATCGACCGCGAAC
GAGGAACACAGCTAGAGCTGGCATTGACGATACCGCCCGCATCGACGGTG
ACTCTCACATACGACTTTGAGAAAGCGATTCTGCGATACACTGAGTATCC
TCCAGACGCAAACCGCGGCTTCAACGTCGCTCCCGCCGTGATCAAGCTCG
ACGCAGCAAACGGCCAAAACCACCCGATCTATATCCGCACCACCAGCCTT
CTTCTACCGCTTCCCACCCCCGATTTCAGCATGCCTTACAACGTGATCAT
CCTGACCAGCACCGTAGTAGCGCTCGCCTTTGGCAGTATCTTCAACCTCC
TCGTCCGTCGATTTGTCACGGCCGAAGAAGCGTCCGCGCTGACGGCGCAA
ACCCTCAAGGGACGCCTGGGGGGCAAGTTAGTTGCCCTACGGGACCGAAT
CAAGGGCAAGACAGCCAAGACAGAATAGGGCCTTCGCGAAATGGATTACC
CTGACTCAGTCTCTGTCGGGATTGTTTTGCGCCTCGCTGAACTTCATCGA
CTCAACCCGAACTACTCGCCCAGTCACGTCGTTTGAACTCATGGGCGACC
ATCCGGCTTCAAGTAATCTGCATCTGCTGCACGGGACACTTCCCGGCGAG
GTGGTCTGCACTGAAAATCTGACACCATTCCTGAAGCTCCTACCATGCAA
GGGCAAGGCAGGCGTTTCTAGCCTTCTAGACGGGCATAAACTGTTTGACG
CGTCTTGGCAGAGCATGTCTGTGGACGTCAGTCCTGTCTGTCCTCACCCT
GGAGAGTGCTCCGTGCATGTCGATCAGTCTGTGGACATTGTTCTGGATAT
CGACCGGTCAAAACGACCACGCGATGACGGTCCTCTCTCTCCTTACCTTA
CTTTTCGTTGTCGCGCTCTCTTCGTTCACATCGGCGACTTCGGACTACCA
CGAGAGCCTCTACCTCCAGCCACTCCCGCAGTCATCCCTGTTAGCATCCT
TCAACTTTCGAGGCAATGAGTCCCAAGAGTCCTTCGATGAACGGCATTTC
CGCTATTTTCCGAGAGCCTTAGGCCAGATTTTACAGCACGCCAATACGAA
GGAGCTCCATCTGCGGTTCACTACTGGACGATGGGATGCTGAGAGCTGGG
GTCCTCGTCCTTGGAATGGGACCAAAGAGGGCGGTACTGGTGTTGAGCTA
TGGGCCTGGATCGATGCACCTGATGACGAAGCGCAATCCCATTCCGCGAC
CTGTACCTTCTGATCAGCTTGCATGTGACACATCCAAGCCTTACCATTCC
GATGATACCTGCTATCCTTTGGAAAGCACATCGGAAAAGGGCTGGAGCTT
GACGGAAATCTTCGGGCGCACCCTCAGTGGCGCTTGTCCCCTCACCGATA
ATACTTCTCAAGAGCCGGTCTGCCTACGGGTGCCGCATGAGCGCGAGGTG
CTTGTCACTCCAGGTGCAGTGGAGACCAAGAAGACGGATGGCTTCACCCG
CTGTTTCACCCTGGAGCCTTCTACTCCGTTCGACCTCACCATCCCTGAAC
AGGAAGTTACCACCCATGTGCCACTTGATGAACCTGTCCTAAGCGCAGAG
AGAACGATTGTTGGTCACGGCCAAGAGCGCGGTGGCATGCGGATCATCTT
CGACAACCCAAGTAACACCAACTCTGTTGACTTCATCTACTTCGAAACTC
TACCATGGTTTCTACGACCTTATGTCCACACACTGCAAGCTTCAATCACA
GGCCGCGATGGACTTCGCCAGCAAGTACCCGCCTCACACTTCATCCGGGA
ATCATTCTACCGACCAGCAATCGACCGCGAACGAGGAACACAGCTAGAGC
TGGCATTGACGATACCGCCCGCATCGACGGTGACTCTCACATACGACTTT
GAGAAAGCGATTCTGCGATACACTGAGTATCCTCCAGACGCAAACCGCGG
CTTCAACGTCGCTCCCGCCGTGATCAAGCTCGACGCAGCAAACGGCCAAA
ACCACCCGATCTATATCCGCACCACCAGCCTTCTTCTACCGCTTCCCACC
CCCGATTTCAGCATGCCTTACAACGTGATCATCCTGACCAGCACCGTAGT
AGCGCTCGCCTTTGGCAGTATCTTCAACCTCCTCGTCCGTCGATTTGTCA
CGGCCGAAGAAGCGTCCGCGCTGACGGCGCAAACCCTCAAGGGACGCCTG
GGGGGCAAGTTAGTTGCCCTACGGGACCGAATCAAGGGCAAGACAGCCAA
GACAGAATAGGGCCTTCGCGAAATGGATTACCCTGACTCAGTCTCTGTCG
GGATTGTTTTGCGCCTCGCTGAACTTCATCGACTCAACCCGAACTACTCG
CCCAGTCACGTCGTTTGAACTCATGGGCGACCATCCGGCTTCAAGTAATC
TGCATCTGCTGCACGGGACACTTCCCGGCGAGGTGGTCTGCACTGAAAAT
CTGACACCATTCCTGAAGCTCCTACCATGCAAGGGCAAGGCAGGCGTTTC
TAGCCTTCTAGACGGGCATAAACTGTTTGACGCGTCTTGGCAGAGCATGT
CTGTGGACGTCAGTCCTGTCTGTCCTCACCCTGGAGAGTGCTCCGTGCAT
GTCGATCAGTCTGTGGACATTGTTCTGGATATCGACCGGTCAAAACGACC
ACGCGATGACGGTCCTCTCTCTCCTTACCTTACTTTTCGTTGTCGCGCTC
TCTTCGTTCACATCGGCGACTTCGGACTACCACGAGAGCCTCTACCTCCA
GCCACTCCCGCAGTCATCCCTGTTAGCATCCTTCAACTTTCGAGGCAATG
AGTCCCAAGAGTCCTTCGATGAACGGCATTTCCGCTATTTTCCGAGAGCC
TTAGGCCAGATTTTACAGCACGCCAATACGAAGGAGCTCCATCTGCGGTT
CACTACTGGACGATGGGATGCTGAGAGCTGGGGTCCTCGTCCTTGGAATG
GGACCAAAGAGGGCGGTACTGGTGTTGAGCTATGGGCCTGGATCGATGCA
CCTGATGACGAAGCGCAATCCCATTCCGCGACCTGTACCTTCTGATCAGC
TTGCATGTGACACATCCAAGCCTTACCATTCCGATGATACCTGCTATCCT
TTGGAAAGCACATCGGAAAAGGGCTGGAGCTTGACGGAAATCTTCGGGCG
CACCCTCAGTGGCGCTTGTCCCCTCACCGATAATACTTCTCAAGAGCCGG
TCTGCCTACGGGTGCCGCATGAGCGCGAGGTGCTTGTCACTCCAGGTGCA
GTGGAGACCAAGAAGACGGATGGCTTCACCCGCTGTTTCACCCTGGAGCC
TTCTACTCCGTTCGACCTCACCATCCCTGAACAGGAAGTTACCACCCATG
TGCCACTTGATGAACCTGTCCTAAGCGCAGAGAGAACGATTGTTGGTCAC
GGCCAAGAGCGCGGTGGCATGCGGATCATCTTCGACAACCCAAGTAACAC
CAACTCTGTTGACTTCATCTACTTCGAAACTCTACCATGGTTTCTACGAC
CTTATGTCCACACACTGCAAGCTTCAATCACAGGCCGCGATGGACTTCGC
CAGCAAGTACCCGCCTCACACTTCATCCGGGAATCATTCTACCGACCAGC
AATCGACCGCGAACGAGGAACACAGCTAGAGCTGGCATTGACGATACCGC
CCGCATCGACGGTGACTCTCACATACGACTTTGAGAAAGCGATTCTGCGA
TACACTGAGTATCCTCCAGACGCAAACCGCGGCTTCAACGTCGCTCCCGC
CGTGATCAAGCTCGACGCAGCAAACGGCCAAAACCACCCGATCTATATCC
GCACCACCAGCCTTCTTCTACCGCTTCCCACCCCCGATTTCAGCATGCCT
TACAACGTGATCATCCTGACCAGCACCGTAGTAGCGCTCGCCTTTGGCAG
TATCTTCAACCTCCTCGTCCGTCGATTTGTCACGGCCGAAGAAGCGTCCG
CGCTGACGGCGCAAACCCTCAAGGGACGCCTGGGGGGCAAGTTAGTTGCC
CTACGGGACCGAATCAAGGGCAAGACAGCCAAGACAGAATAGGGCCTTCG
CGAAATGGATTACCCTGACTCAGTCTCTGTCGGGATTGTTTTGCGCCTCG
CTGAACTTCATCGACTCAACCCGAACTACTCGCCCAGTCACGTCGTTTGA
ACTCATGGGCGACCATCCGGCTTCAAGTAATCTGCATCTGCTGCACGGGA
CACTTCCCGGCGAGGTGGTCTGCACTGAAAATCTGACACCATTCCTGAAG
CTCCTACCATGCAAGGGCAAGGCAGGCGTTTCTAGCCTTCTAGACGGGCA
TAAACTGTTTGACGCGTCTTGGCAGAGCATGTCTGTGGACGTCAGTCCTG
TCTGTCCTCACCCTGGAGAGTGCTCCGTGCATGTCGATCAGTCTGTGGAC
ATTGTTCTGGATATCGACCGGTCAAAACGACCACGCGATGACGGTCCTCT
CTCTCCTTACCTTACTTTTCGTTGTCGCGCTCTCTTCGTTCACATCGGCG
ACTTCGGACTACCACGAGAGCCTCTACCTCCAGCCACTCCCGCAGTCATC
CCTGTTAGCATCCTTCAACTTTCGAGGCAATGAGTCCCAAGAGTCCTTCG
ATGAACGGCATTTCCGCTATTTTCCGAGAGCCTTAGGCCAGATTTTACAG
CACGCCAATACGAAGGAGCTCCATCTGCGGTTCACTACTGGACGATGGGA
TGCTGAGAGCTGGGGTCCTCGTCCTTGGAATGGGACCAAAGAGGGCGGTA
CTGGTGTTGAGCTATGGGCCTGGATCGATGCACCTGATGACGAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042765 | GPI-anchor transamidase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016255 | attachment of GPI anchor to protein |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002340-T1.utr5p1 | KJC3_002340-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | BUSCO:EOG09261LEU |
| DBxref | InterPro:IPR007245 |
| DBxref | PFAM:PF04113 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2302176..2304313 - |
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