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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2326767..2329421+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002351-T1 ID=KJC3_002351-T1|Name=KJC3_002351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2655bp|location=Sequence derived from alignment at ch2:2326767..2329421+ (Aspergillus niger KJC3)
ATTTTCTCGTGGGGCGGCGATAAGATTAACTGGTGCCGGGCGGCGGCTTT
CTGCCGCTTTTTTTTCTTTCCCTTCGGCGGCTGCGACTTTGCTGCGCACG
TTTGTTTCTCCTCGCATCTTGGATTTTGTGTATTCGGTCGGGGTTTAATT
TTGCAATCATGGGTCAGAAGAGACAGCGTGGCTCGAAGAGCGCAGACTTG
CAGGCGAAGAAGAGGAAGAAGGACGTCTCCGCGGTGGAGGACGGCGAAGA
TGCGCTTGTCACCGTCAATGACCTTAACTGGAAGGAGGTCGCGCTGCCTG
ATCGGCTTGAGGATGCAGGTGGTTTCTTTGGATTGGAGGAAATTGACGGA
GTGGAGGTTATCAAGGGAGGATCTGAGGGTCTCCGATTTAAAGTATGCAG
CGTTGGCTGGTGGTGATAGGAGAGTGCTAATTGATCATCCAGGCCGCACA
TGGAAAACCCAAGAAGTCAATCCTGAAGAAGAAGGCACCCGAGGAAGAAG
AACCGAAATTTGACGACGACGAGTGGTCCGGTTTCAGCGATAACGAAGTG
ACCGAGAAGAAGGACACTGCACCGAAGGAAGACCAGAAGGACGAACAGGA
AGCCGACAAACCCACGGCCGAGGAGAAGAAGAAGGCCAAGAAGGACAGGC
AGGCAGAGCAGAAGAAAGCCAAGAAAGAAGCGAAGCAGAAGACTACACCC
AACCAGGAGGATAAGAGCATCAAGCCCGGACTTTCCTTTGCTGCGCTCCA
GGATGAAGAGGATGACGATGGCGTGGATGTTTCTGCCTGGGAGTCGCTCG
GATTGTCTCCTGAGATCCTCACCAGTCTGTCGAAGATGAAGTTCACTACA
CCAACCCTCGTTCAGAAGTCCTGCATTCCCCAGATCCTCGATGGCCACGA
TGTGATCGGCAAGGCGTCGACAGGTTCCGGAAAGACATTGGCGTTCGGTA
TTCCCATCCTCGAGCACTATCTTGAGAAGAGACGGCAGGACTTGCGCGCT
GGCAAGGAAGAGAAGAAGAAGGATACGGCTCCGATTGCTCTCATTATGTC
TCCCACTCGAGAATTGGCGCATCAATTGGCTAAACATATTGGCGAGCTTG
CTCTCCACGCTCCCGGCTCTAATGCCCGCATTGCACTCCTCACAGGTGGT
TTGTCCGTGCAGAAGCAGCAGCGAGTGCTCGCCGGAGCTGACATCGTCAT
CGGTACCCCTGGTCGGGTATGGGAAGTGCTTAGCAGTGGTCAGGGTTTGA
TCCGCAAGATGAGTGAAATCAAGTTCCTTGTCATTGATGAGGCGGACAGA
CTTCTCAGTGAGGGTCACTTCAAGGAAGCCGAGGAGATCCTTGGCGCTCT
CGATCGTGTTGAGGAGGGTAACTTCGGTGGTGAAGAAAGCGAAGATGAAG
AAAAGGAGGATGCTCGTTCTGAGAGGCAGACGTTGGTCTTCTCCGCTACA
TTCCACCGTGACTTGCAGCAGAAGCTAGCCGGCAAAGCGCGTTGGACGGG
AGGCGACATCATGAGCAACAAGGAGTCCATGGAATACCTCCTTCAGAAAC
TGAAGTTCCGCGAAGAGAAGCCCAAGTTCATTGACGTCAATCCGGTCTCG
CAGATGGCTGAAGGGCTTAAGGAGGGCATTGTCGAATGTGGAGCTATGGA
GAAGGTATGTTCAGATGTCGCAGAGTCTTATTCATATGCTAACCAAATCT
AGGATCTTTATCTCTACACTCTCCTGCTCTATAACCCCAAGCACCGGACA
CTTGTGTTCACCAACTCCATCTCCGCCGTCCGCCGTCTCACTCAATTGCT
CCAGAACCTCGGCCTTCCCGCTCTGGCACTTCACTCCTCTATGGCCCAGA
AAGCACGTCTACGTTCAGTAGAGCGATTCTCCTCGCCCACATCTGACCCC
AGCAGCATCCTTGTCGCCACCGACGTGGCTGCGCGTGGTCTCGACATCAA
GGGCATCGACTTCGTCATTCATTATCATGCTCCCCGCGCAGCCGACACCT
ACGTCCACCGCTCCGGACGTACTGCCCGTGCGGGTGCATCAGGAAAGAGT
GTGATCATCTGCGCTCCGGAGGAAATGGTTGGAGTGGTTCGTCTCGCCGC
CAAAGTGCACGCCAACATGGCCAACGGCAAGAAATTGCCGCTTGAGTCGT
TAGAGCTCGACCGTCGGGTTGTCCTCCGGGTCCGTCAACGCGTGGACTTG
GCCGCCAAGATTACCGACTCCAACATCGCCAAGGAGAAGATCTCCGCGGA
AGATAACTGGCTCCAAAAGGCAGCAGAGGACCTTGGGGTGGAGTATGACA
GCGAGGAGTTTGAGAGCGCCCAGGGCCGTGGTCGCGGTCGCGGACGTGGC
CGTCAGGAACGGCAGCGCAAGGCGGGTGAAGTTACGAAGAATGAGTTGGC
TGCTATGCGGGCGGAGTTGAAGCATTTGCTGTCTCAGCGAGTGAACGTGG
GCGTGAGTGAGCGGTACCTCACCTCAGGACGGGTGGATATTGAGGCGTTG
CTGCGTGGAGAAGGCAACAATTCCTTCCTGGGCCAGGTGGATCCCTTGGA
TTTCTAATGCTTGTATTTACTACTTTGTACAGAGCTGTTCATATACCAAT
CGAAGACAACAACTCAATAGGGATTAGTAGATCGTTCATACACCTTAGTT
CCGAC back to topCoding sequence (CDS) from alignment at ch2:2326767..2329421+ >KJC3_002351-T1 ID=KJC3_002351-T1|Name=KJC3_002351-T1|organism=Aspergillus niger KJC3|type=CDS|length=6903bp|location=Sequence derived from alignment at ch2:2326767..2329421+ (Aspergillus niger KJC3)
ATGGGTCAGAAGAGACAGCGTGGCTCGAAGAGCGCAGACTTGCAGGCGAA
GAAGAGGAAGAAGGACGTCTCCGCGGTGGAGGACGGCGAAGATGCGCTTG
TCACCGTCAATGACCTTAACTGGAAGGAGGTCGCGCTGCCTGATCGGCTT
GAGGATGCAGGTGGTTTCTTTGGATTGGAGGAAATTGACGGAGTGGAGGT
TATCAAGGGAGGATCTGAGGGTCTCCGATTTAAAGCCGCACATGGAAAAC
CCAAGAAGTCAATCCTGAAGAAGAAGGCACCCGAGGAAGAAGAACCGAAA
TTTGACGACGACGAGTGGTCCGGTTTCAGCGATAACGAAGTGACCGAGAA
GAAGGACACTGCACCGAAGGAAGACCAGAAGGACGAACAGGAAGCCGACA
AACCCACGGCCGAGGAGAAGAAGAAGGCCAAGAAGGACAGGCAGGCAGAG
CAGAAGAAAGCCAAGAAAGAAGCGAAGCAGAAGACTACACCCAACCAGGA
GGATAAGAGCATCAAGCCCGGACTTTCCTTTGCTGCGCTCCAGGATGAAG
AGGATGACGATGGCGTGGATGTTTCTGCCTGGGAGTCGCTCGGATTGTCT
CCTGAGATCCTCACCAGTCTGTCGAAGATGAAGTTCACTACACCAACCCT
CGTTCAGAAGTCCTGCATTCCCCAGATCCTCGATGGCCACGATGTGATCG
GCAAGGCGTCGACAGGTTCCGGAAAGACATTGGCGTTCGGTATTCCCATC
CTCGAGCACTATCTTGAGAAGAGACGGCAGGACTTGCGCGCTGGCAAGGA
AGAGAAGAAGAAGGATACGGCTCCGATTGCTCTCATTATGTCTCCCACTC
GAGAATTGGCGCATCAATTGGCTAAACATATTGGCGAGCTTGCTCTCCAC
GCTCCCGGCTCTAATGCCCGCATTGCACTCCTCACAGGTGGTTTGTCCGT
GCAGAAGCAGCAGCGAGTGCTCGCCGGAGCTGACATCGTCATCGGTACCC
CTGGTCGGGTATGGGAAGTGCTTAGCAGTGGTCAGGGTTTGATCCGCAAG
ATGAGTGAAATCAAGTTCCTTGTCATTGATGAGGCGGACAGACTTCTCAG
TGAGGGTCACTTCAAGGAAGCCGAGGAGATCCTTGGCGCTCTCGATCGTG
TTGAGGAGGGTAACTTCGGTGGTGAAGAAAGCGAAGATGAAGAAAAGGAG
GATGCTCGTTCTGAGAGGCAGACGTTGGTCTTCTCCGCTACATTCCACCG
TGACTTGCAGCAGAAGCTAGCCGGCAAAGCGCGTTGGACGGGAGGCGACA
TCATGAGCAACAAGGAGTCCATGGAATACCTCCTTCAGAAACTGAAGTTC
CGCGAAGAGAAGCCCAAGTTCATTGACGTCAATCCGGTCTCGCAGATGGC
TGAAGGGCTTAAGGAGGGCATTGTCGAATGTGGAGCTATGGAGAAGGATC
TTTATCTCTACACTCTCCTGCTCTATAACCCCAAGCACCGGACACTTGTG
TTCACCAACTCCATCTCCGCCGTCCGCCGTCTCACTCAATTGCTCCAGAA
CCTCGGCCTTCCCGCTCTGGCACTTCACTCCTCTATGGCCCAGAAAGCAC
GTCTACGTTCAGTAGAGCGATTCTCCTCGCCCACATCTGACCCCAGCAGC
ATCCTTGTCGCCACCGACGTGGCTGCGCGTGGTCTCGACATCAAGGGCAT
CGACTTCGTCATTCATTATCATGCTCCCCGCGCAGCCGACACCTACGTCC
ACCGCTCCGGACGTACTGCCCGTGCGGGTGCATCAGGAAAGAGTGTGATC
ATCTGCGCTCCGGAGGAAATGGTTGGAGTGGTTCGTCTCGCCGCCAAAGT
GCACGCCAACATGGCCAACGGCAAGAAATTGCCGCTTGAGTCGTTAGAGC
TCGACCGTCGGGTTGTCCTCCGGGTCCGTCAACGCGTGGACTTGGCCGCC
AAGATTACCGACTCCAACATCGCCAAGGAGAAGATCTCCGCGGAAGATAA
CTGGCTCCAAAAGGCAGCAGAGGACCTTGGGGTGGAGTATGACAGCGAGG
AGTTTGAGAGCGCCCAGGGCCGTGGTCGCGGTCGCGGACGTGGCCGTCAG
GAACGGCAGCGCAAGGCGGGTGAAGTTACGAAGAATGAGTTGGCTGCTAT
GCGGGCGGAGTTGAAGCATTTGCTGTCTCAGCGAGTGAACGTGGGCGTGA
GTGAGCGGTACCTCACCTCAGGACGGGTGGATATTGAGGCGTTGCTGCGT
GGAGAAGGCAACAATTCCTTCCTGGGCCAGGTGGATCCCTTGGATTTCTA
AATGGGTCAGAAGAGACAGCGTGGCTCGAAGAGCGCAGACTTGCAGGCGA
AGAAGAGGAAGAAGGACGTCTCCGCGGTGGAGGACGGCGAAGATGCGCTT
GTCACCGTCAATGACCTTAACTGGAAGGAGGTCGCGCTGCCTGATCGGCT
TGAGGATGCAGGTGGTTTCTTTGGATTGGAGGAAATTGACGGAGTGGAGG
TTATCAAGGGAGGATCTGAGGGTCTCCGATTTAAAGCCGCACATGGAAAA
CCCAAGAAGTCAATCCTGAAGAAGAAGGCACCCGAGGAAGAAGAACCGAA
ATTTGACGACGACGAGTGGTCCGGTTTCAGCGATAACGAAGTGACCGAGA
AGAAGGACACTGCACCGAAGGAAGACCAGAAGGACGAACAGGAAGCCGAC
AAACCCACGGCCGAGGAGAAGAAGAAGGCCAAGAAGGACAGGCAGGCAGA
GCAGAAGAAAGCCAAGAAAGAAGCGAAGCAGAAGACTACACCCAACCAGG
AGGATAAGAGCATCAAGCCCGGACTTTCCTTTGCTGCGCTCCAGGATGAA
GAGGATGACGATGGCGTGGATGTTTCTGCCTGGGAGTCGCTCGGATTGTC
TCCTGAGATCCTCACCAGTCTGTCGAAGATGAAGTTCACTACACCAACCC
TCGTTCAGAAGTCCTGCATTCCCCAGATCCTCGATGGCCACGATGTGATC
GGCAAGGCGTCGACAGGTTCCGGAAAGACATTGGCGTTCGGTATTCCCAT
CCTCGAGCACTATCTTGAGAAGAGACGGCAGGACTTGCGCGCTGGCAAGG
AAGAGAAGAAGAAGGATACGGCTCCGATTGCTCTCATTATGTCTCCCACT
CGAGAATTGGCGCATCAATTGGCTAAACATATTGGCGAGCTTGCTCTCCA
CGCTCCCGGCTCTAATGCCCGCATTGCACTCCTCACAGGTGGTTTGTCCG
TGCAGAAGCAGCAGCGAGTGCTCGCCGGAGCTGACATCGTCATCGGTACC
CCTGGTCGGGTATGGGAAGTGCTTAGCAGTGGTCAGGGTTTGATCCGCAA
GATGAGTGAAATCAAGTTCCTTGTCATTGATGAGGCGGACAGACTTCTCA
GTGAGGGTCACTTCAAGGAAGCCGAGGAGATCCTTGGCGCTCTCGATCGT
GTTGAGGAGGGTAACTTCGGTGGTGAAGAAAGCGAAGATGAAGAAAAGGA
GGATGCTCGTTCTGAGAGGCAGACGTTGGTCTTCTCCGCTACATTCCACC
GTGACTTGCAGCAGAAGCTAGCCGGCAAAGCGCGTTGGACGGGAGGCGAC
ATCATGAGCAACAAGGAGTCCATGGAATACCTCCTTCAGAAACTGAAGTT
CCGCGAAGAGAAGCCCAAGTTCATTGACGTCAATCCGGTCTCGCAGATGG
CTGAAGGGCTTAAGGAGGGCATTGTCGAATGTGGAGCTATGGAGAAGGAT
CTTTATCTCTACACTCTCCTGCTCTATAACCCCAAGCACCGGACACTTGT
GTTCACCAACTCCATCTCCGCCGTCCGCCGTCTCACTCAATTGCTCCAGA
ACCTCGGCCTTCCCGCTCTGGCACTTCACTCCTCTATGGCCCAGAAAGCA
CGTCTACGTTCAGTAGAGCGATTCTCCTCGCCCACATCTGACCCCAGCAG
CATCCTTGTCGCCACCGACGTGGCTGCGCGTGGTCTCGACATCAAGGGCA
TCGACTTCGTCATTCATTATCATGCTCCCCGCGCAGCCGACACCTACGTC
CACCGCTCCGGACGTACTGCCCGTGCGGGTGCATCAGGAAAGAGTGTGAT
CATCTGCGCTCCGGAGGAAATGGTTGGAGTGGTTCGTCTCGCCGCCAAAG
TGCACGCCAACATGGCCAACGGCAAGAAATTGCCGCTTGAGTCGTTAGAG
CTCGACCGTCGGGTTGTCCTCCGGGTCCGTCAACGCGTGGACTTGGCCGC
CAAGATTACCGACTCCAACATCGCCAAGGAGAAGATCTCCGCGGAAGATA
ACTGGCTCCAAAAGGCAGCAGAGGACCTTGGGGTGGAGTATGACAGCGAG
GAGTTTGAGAGCGCCCAGGGCCGTGGTCGCGGTCGCGGACGTGGCCGTCA
GGAACGGCAGCGCAAGGCGGGTGAAGTTACGAAGAATGAGTTGGCTGCTA
TGCGGGCGGAGTTGAAGCATTTGCTGTCTCAGCGAGTGAACGTGGGCGTG
AGTGAGCGGTACCTCACCTCAGGACGGGTGGATATTGAGGCGTTGCTGCG
TGGAGAAGGCAACAATTCCTTCCTGGGCCAGGTGGATCCCTTGGATTTCT
AAATGGGTCAGAAGAGACAGCGTGGCTCGAAGAGCGCAGACTTGCAGGCG
AAGAAGAGGAAGAAGGACGTCTCCGCGGTGGAGGACGGCGAAGATGCGCT
TGTCACCGTCAATGACCTTAACTGGAAGGAGGTCGCGCTGCCTGATCGGC
TTGAGGATGCAGGTGGTTTCTTTGGATTGGAGGAAATTGACGGAGTGGAG
GTTATCAAGGGAGGATCTGAGGGTCTCCGATTTAAAGCCGCACATGGAAA
ACCCAAGAAGTCAATCCTGAAGAAGAAGGCACCCGAGGAAGAAGAACCGA
AATTTGACGACGACGAGTGGTCCGGTTTCAGCGATAACGAAGTGACCGAG
AAGAAGGACACTGCACCGAAGGAAGACCAGAAGGACGAACAGGAAGCCGA
CAAACCCACGGCCGAGGAGAAGAAGAAGGCCAAGAAGGACAGGCAGGCAG
AGCAGAAGAAAGCCAAGAAAGAAGCGAAGCAGAAGACTACACCCAACCAG
GAGGATAAGAGCATCAAGCCCGGACTTTCCTTTGCTGCGCTCCAGGATGA
AGAGGATGACGATGGCGTGGATGTTTCTGCCTGGGAGTCGCTCGGATTGT
CTCCTGAGATCCTCACCAGTCTGTCGAAGATGAAGTTCACTACACCAACC
CTCGTTCAGAAGTCCTGCATTCCCCAGATCCTCGATGGCCACGATGTGAT
CGGCAAGGCGTCGACAGGTTCCGGAAAGACATTGGCGTTCGGTATTCCCA
TCCTCGAGCACTATCTTGAGAAGAGACGGCAGGACTTGCGCGCTGGCAAG
GAAGAGAAGAAGAAGGATACGGCTCCGATTGCTCTCATTATGTCTCCCAC
TCGAGAATTGGCGCATCAATTGGCTAAACATATTGGCGAGCTTGCTCTCC
ACGCTCCCGGCTCTAATGCCCGCATTGCACTCCTCACAGGTGGTTTGTCC
GTGCAGAAGCAGCAGCGAGTGCTCGCCGGAGCTGACATCGTCATCGGTAC
CCCTGGTCGGGTATGGGAAGTGCTTAGCAGTGGTCAGGGTTTGATCCGCA
AGATGAGTGAAATCAAGTTCCTTGTCATTGATGAGGCGGACAGACTTCTC
AGTGAGGGTCACTTCAAGGAAGCCGAGGAGATCCTTGGCGCTCTCGATCG
TGTTGAGGAGGGTAACTTCGGTGGTGAAGAAAGCGAAGATGAAGAAAAGG
AGGATGCTCGTTCTGAGAGGCAGACGTTGGTCTTCTCCGCTACATTCCAC
CGTGACTTGCAGCAGAAGCTAGCCGGCAAAGCGCGTTGGACGGGAGGCGA
CATCATGAGCAACAAGGAGTCCATGGAATACCTCCTTCAGAAACTGAAGT
TCCGCGAAGAGAAGCCCAAGTTCATTGACGTCAATCCGGTCTCGCAGATG
GCTGAAGGGCTTAAGGAGGGCATTGTCGAATGTGGAGCTATGGAGAAGGA
TCTTTATCTCTACACTCTCCTGCTCTATAACCCCAAGCACCGGACACTTG
TGTTCACCAACTCCATCTCCGCCGTCCGCCGTCTCACTCAATTGCTCCAG
AACCTCGGCCTTCCCGCTCTGGCACTTCACTCCTCTATGGCCCAGAAAGC
ACGTCTACGTTCAGTAGAGCGATTCTCCTCGCCCACATCTGACCCCAGCA
GCATCCTTGTCGCCACCGACGTGGCTGCGCGTGGTCTCGACATCAAGGGC
ATCGACTTCGTCATTCATTATCATGCTCCCCGCGCAGCCGACACCTACGT
CCACCGCTCCGGACGTACTGCCCGTGCGGGTGCATCAGGAAAGAGTGTGA
TCATCTGCGCTCCGGAGGAAATGGTTGGAGTGGTTCGTCTCGCCGCCAAA
GTGCACGCCAACATGGCCAACGGCAAGAAATTGCCGCTTGAGTCGTTAGA
GCTCGACCGTCGGGTTGTCCTCCGGGTCCGTCAACGCGTGGACTTGGCCG
CCAAGATTACCGACTCCAACATCGCCAAGGAGAAGATCTCCGCGGAAGAT
AACTGGCTCCAAAAGGCAGCAGAGGACCTTGGGGTGGAGTATGACAGCGA
GGAGTTTGAGAGCGCCCAGGGCCGTGGTCGCGGTCGCGGACGTGGCCGTC
AGGAACGGCAGCGCAAGGCGGGTGAAGTTACGAAGAATGAGTTGGCTGCT
ATGCGGGCGGAGTTGAAGCATTTGCTGTCTCAGCGAGTGAACGTGGGCGT
GAGTGAGCGGTACCTCACCTCAGGACGGGTGGATATTGAGGCGTTGCTGC
GTGGAGAAGGCAACAATTCCTTCCTGGGCCAGGTGGATCCCTTGGATTTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002351-T1.utr5p1 | KJC3_002351-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002351-T1.utr3p1 | KJC3_002351-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2326767..2329421 + |
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