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KJC3_002352-T1, KJC3_002352-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002352-T1
Unique NameKJC3_002352-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2330031..2331248+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002352-T1 ID=KJC3_002352-T1|Name=KJC3_002352-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1218bp|location=Sequence derived from alignment at ch2:2330031..2331248+ (Aspergillus niger KJC3)
ATTGCATATTGCAGAGAGGTATCCCAGTGAAGAATCCCAGTGATTCATTC
GAGCGATAGCTGATACCCTCAGGTACTATATATTTGTGAGTTGAGAAAGC
TTCCCAGCAAGCTACCACAGACATCATCCCGTCTACAAACCTACACCTAC
TATCACTAGTCTGCATGATCAACACTAACCACCAAAAGTCACACTAAAAT
TATCACATCAATAGCATTGAAAAAAACAACATCAACCAACATCAAAATGT
CCCTCCCACGCACCTTCACCCGTCTCCTTACCAAACGACCACCCACCCAC
CTCAACCCTTACACCCAAATCCGCACCATCAAAGCCGGCGCCGCCTCCTC
GGCCATCGAATCCCCCTCCACCCTCCCCTCCTACCATGACCGTCTCGACC
AGCCCCCAACTCAACCACCCTCTCAATCTCAACTCTCCGCAGCCGCCGAA
CACCTCATAACCACCCACCCGCTAGTCCAATCCCTCCGCTCGAACCCCTC
CTACAAAGAGTCCCGTCCCCACCTACACATGAAACCCTCCCACCGGCCCA
ATCACTTCGTCGCGGGCACTCTCTCCGGCGCGAACAAGGTGACGGTGCCG
CCGTATATGTTCACTTCCATTGTCAACCCAAGCCGAACCCAGAAGCAGAA
TGATGAGGGGAAGGAGGGGAAGGAGGCCCCCCGCGCGCGCCTCATCTCCG
TGTTCCACATCGGGCCACAGCTGTGCGGACACCCCGGGTACGTTCACGGA
GGCTTGCTGAGCGTGATGTTCGACGAGGCGTTTGCGCGGTGCGTGTCGGA
TTCGTTTAAGAGCGGGTTGGGCATGACGGCGAATTTGAATGTGGATTTCA
GGAAGCCGGCGTTGCCGGAACGGGTGTATGTGCTCAAGGCGGAGACGGTC
AAGGTTGAGGGGAGGAAGGCGTGGGTGGAGGGAGAGATGAGGAGTATGCC
TGCTGATGGTGCTGAGGGAGAAGGGGAGACAGTAGTGGCGGAGGCGAGGG
CGTTGTTTGTGGAGCCGAAGTTTGCGGAGGTGAGTTCTTTCTATTCTTTT
CCCTGACGTGGTTTGTATGGGATGATGGTTGACTGATTGACGATGTGTAG
TCCATGGTGCCGCTGTATCGGAATTGAGGTGTGACAAAAAAAAGGAGAGA
CAGGAGGCGATAACAATACCCTTTCATTTTTGTGCGATAGACTATAGACC
TATGTAATCAACAGATAG
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Coding sequence (CDS) from alignment at ch2:2330031..2331248+

>KJC3_002352-T1 ID=KJC3_002352-T1|Name=KJC3_002352-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch2:2330031..2331248+ (Aspergillus niger KJC3)
ATGTCCCTCCCACGCACCTTCACCCGTCTCCTTACCAAACGACCACCCAC
CCACCTCAACCCTTACACCCAAATCCGCACCATCAAAGCCGGCGCCGCCT
CCTCGGCCATCGAATCCCCCTCCACCCTCCCCTCCTACCATGACCGTCTC
GACCAGCCCCCAACTCAACCACCCTCTCAATCTCAACTCTCCGCAGCCGC
CGAACACCTCATAACCACCCACCCGCTAGTCCAATCCCTCCGCTCGAACC
CCTCCTACAAAGAGTCCCGTCCCCACCTACACATGAAACCCTCCCACCGG
CCCAATCACTTCGTCGCGGGCACTCTCTCCGGCGCGAACAAGGTGACGGT
GCCGCCGTATATGTTCACTTCCATTGTCAACCCAAGCCGAACCCAGAAGC
AGAATGATGAGGGGAAGGAGGGGAAGGAGGCCCCCCGCGCGCGCCTCATC
TCCGTGTTCCACATCGGGCCACAGCTGTGCGGACACCCCGGGTACGTTCA
CGGAGGCTTGCTGAGCGTGATGTTCGACGAGGCGTTTGCGCGGTGCGTGT
CGGATTCGTTTAAGAGCGGGTTGGGCATGACGGCGAATTTGAATGTGGAT
TTCAGGAAGCCGGCGTTGCCGGAACGGGTGTATGTGCTCAAGGCGGAGAC
GGTCAAGGTTGAGGGGAGGAAGGCGTGGGTGGAGGGAGAGATGAGGAGTA
TGCCTGCTGATGGTGCTGAGGGAGAAGGGGAGACAGTAGTGGCGGAGGCG
AGGGCGTTGTTTGTGGAGCCGAAGTTTGCGGAGTCCATGGTGCCGCTGTA
TCGGAATTGAATGTCCCTCCCACGCACCTTCACCCGTCTCCTTACCAAAC
GACCACCCACCCACCTCAACCCTTACACCCAAATCCGCACCATCAAAGCC
GGCGCCGCCTCCTCGGCCATCGAATCCCCCTCCACCCTCCCCTCCTACCA
TGACCGTCTCGACCAGCCCCCAACTCAACCACCCTCTCAATCTCAACTCT
CCGCAGCCGCCGAACACCTCATAACCACCCACCCGCTAGTCCAATCCCTC
CGCTCGAACCCCTCCTACAAAGAGTCCCGTCCCCACCTACACATGAAACC
CTCCCACCGGCCCAATCACTTCGTCGCGGGCACTCTCTCCGGCGCGAACA
AGGTGACGGTGCCGCCGTATATGTTCACTTCCATTGTCAACCCAAGCCGA
ACCCAGAAGCAGAATGATGAGGGGAAGGAGGGGAAGGAGGCCCCCCGCGC
GCGCCTCATCTCCGTGTTCCACATCGGGCCACAGCTGTGCGGACACCCCG
GGTACGTTCACGGAGGCTTGCTGAGCGTGATGTTCGACGAGGCGTTTGCG
CGGTGCGTGTCGGATTCGTTTAAGAGCGGGTTGGGCATGACGGCGAATTT
GAATGTGGATTTCAGGAAGCCGGCGTTGCCGGAACGGGTGTATGTGCTCA
AGGCGGAGACGGTCAAGGTTGAGGGGAGGAAGGCGTGGGTGGAGGGAGAG
ATGAGGAGTATGCCTGCTGATGGTGCTGAGGGAGAAGGGGAGACAGTAGT
GGCGGAGGCGAGGGCGTTGTTTGTGGAGCCGAAGTTTGCGGAGTCCATGG
TGCCGCTGTATCGGAATTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002352KJC3_002352Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002352-T1KJC3_002352-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002352-T1.utr5p1KJC3_002352-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_002352-T1.utr5p2KJC3_002352-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002352-T1.exon1KJC3_002352-T1.exon1Aspergillus niger KJC3exon
KJC3_002352-T1.exon2KJC3_002352-T1.exon2Aspergillus niger KJC3exon
KJC3_002352-T1.exon3KJC3_002352-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002352-T1.cdsKJC3_002352-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002352-T1.utr3p1KJC3_002352-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2330031..2331248 +
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