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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2342273..2343667- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002355-T1 ID=KJC3_002355-T1|Name=KJC3_002355-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1395bp|location=Sequence derived from alignment at ch2:2342273..2343667- (Aspergillus niger KJC3)
ATGGGGCACCTGAAGCAGCCATTCGCGATCCCGCTGTCGCCCGCAATGCC
CCTCCCGGAGTCCAACCCCTCCATCCACGATGATTTCCTCCTTCCGATGA
CTCCTCCAGATCCCTCCGAGGTCGCACTAATGGGAACCAAGGACACTGCG
CCCGTGACTTCAGCCCTGCAGGTTATCGCGGCGGAGCGCGCCGCTCTGGC
GCATCTGGAGCATATCTACCAGACCGATCCGCTGGCACAAGATAACCTCG
CGCGCGCGGTGGCTCAGATTGTGCGCACCATCAAGTATGGCGGGAAACTG
GTCTGCTGTGGTGTCGGCAAGAGTGGTAAGATTGCTCAGAAGCTTGAAGC
CACCATGAATAGTATGGGGATCTATAGTGCTTTTCTGCACCCCACGGAAG
CCTTGCACGGCGACCTGGGCATGATACGACCGGTAAGGCTGTCCTGACCT
CAAGTCAAGGGAGAACCGCTTGCTGACTGAATTCGAATGCACCAGCATGA
TACGCTATTGTTAATATCTTTCTCGGGCCGCACACCCGAGCTTCTGCTCA
TGCTTCCTCATATCCCTTCAACTGTCACGGTCATCGCTATCACTTCCCAT
ATGGTCTCGTCGACTTGTCCTCTGCTTTCATTCCACCCGTCAAACATGGG
GATCCTCTTACCGGCACCGATCCACGAGGATGAAGAGACCTCGATCGGAG
TCTGTGCCCCGACTTCGTCCACCACGGTAGCCTTATCGCTGGGAGATGCA
CTGGCTATCGCTACGGCTCGGCGACTACATACAGCTCCTGGCAGAGGCCC
GGCGGAGATCTTCAAGGGCTTCCATCCTGGCGGGGCCATCGGCGCTGCGT
CCATGGCTTTGACACCTATGAGCATGTCATCTGCGTCAAGTTCTGCCGCC
CCATCAGACTATATTCCTGCTCAACAGACCGCGACCTCCTTTCCGCAGTC
AGACGACAAGCCTAATCAGCGTTCTCTCGTCCGTGATATGCTCGTGTCAC
TCGATCAAATTCCCCGGGTGTCTACTTCGGGTAAAGTCCGTCTTCTAGAC
ATTCTCCTCACTGCTATCCAGCACCCCAACGCCAAGTCATGGGTCCATCT
CTCACCATCCGAAATCGTGCCCCCACGGCATCTCCGCTTCGTCTCCCAGA
GCAACTATGTAGATATGCACGTTTCCGCCTTCACTGAGCTGGGTCTACCT
TTCGGTGTCTCCCGCAAGGATTGGTTCCGCCTCGCGAGCTCGAGCACCAT
CGACGACGCGCGACGGCTGGTTTCTGAGGCTGGTGCATCCTCAGGCACCC
CCGTGACAGTGGTGGCCGTCATGGACGAGACCAACCCTGACCATTGTGTT
GGTGTCATAGAAGCTGAGGATCTATGGAATGATTGTGATGACTAA back to topCoding sequence (CDS) from alignment at ch2:2342273..2343667- >KJC3_002355-T1 ID=KJC3_002355-T1|Name=KJC3_002355-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch2:2342273..2343667- (Aspergillus niger KJC3)
CATGATACGCTATTGTTAATATCTTTCTCGGGCCGCACACCCGAGCTTCT
GCTCATGCTTCCTCATATCCCTTCAACTGTCACGGTCATCGCTATCACTT
CCCATATGGTCTCGTCGACTTGTCCTCTGCTTTCATTCCACCCGTCAAAC
ATGGGGATCCTCTTACCGGCACCGATCCACGAGGATGAAGAGACCTCGAT
CGGAGTCTGTGCCCCGACTTCGTCCACCACGGTAGCCTTATCGCTGGGAG
ATGCACTGGCTATCGCTACGGCTCGGCGACTACATACAGCTCCTGGCAGA
GGCCCGGCGGAGATCTTCAAGGGCTTCCATCCTGGCGGGGCCATCGGCGC
TGCGTCCATGGCTTTGACACCTATGAGCATGTCATCTGCGTCAAGTTCTG
CCGCCCCATCAGACTATATTCCTGCTCAACAGACCGCGACCTCCTTTCCG
CAGTCAGACGACAAGCCTAATCAGCGTTCTCTCGTCCGTGATATGCTCGT
GTCACTCGATCAAATTCCCCGGGTGTCTACTTCGGGTAAAGTCCGTCTTC
TAGACATTCTCCTCACTGCTATCCAGCACCCCAACGCCAAGTCATGGGTC
CATCTCTCACCATCCGAAATCGTGCCCCCACGGCATCTCCGCTTCGTCTC
CCAGAGCAACTATGTAGATATGCACGTTTCCGCCTTCACTGAGCTGGGTC
TACCTTTCGGTGTCTCCCGCAAGGATTGGTTCCGCCTCGCGAGCTCGAGC
ACCATCGACGACGCGCGACGGCTGGTTTCTGAGGCTGGTGCATCCTCAGG
CACCCCCGTGACAGTGGTGGCCGTCATGGACGAGACCAACCCTGACCATT
GTGTTGGTGTCATAGAAGCTGAGGATCTATGGAATGATTGTGATGACTAA
ATGGGGCACCTGAAGCAGCCATTCGCGATCCCGCTGTCGCCCGCAATGCC
CCTCCCGGAGTCCAACCCCTCCATCCACGATGATTTCCTCCTTCCGATGA
CTCCTCCAGATCCCTCCGAGGTCGCACTAATGGGAACCAAGGACACTGCG
CCCGTGACTTCAGCCCTGCAGGTTATCGCGGCGGAGCGCGCCGCTCTGGC
GCATCTGGAGCATATCTACCAGACCGATCCGCTGGCACAAGATAACCTCG
CGCGCGCGGTGGCTCAGATTGTGCGCACCATCAAGTATGGCGGGAAACTG
GTCTGCTGTGGTGTCGGCAAGAGTGGTAAGATTGCTCAGAAGCTTGAAGC
CACCATGAATAGTATGGGGATCTATAGTGCTTTTCTGCACCCCACGGAAG
CCTTGCACGGCGACCTGGGCATGATACGACCGCATGATACGCTATTGTTA
ATATCTTTCTCGGGCCGCACACCCGAGCTTCTGCTCATGCTTCCTCATAT
CCCTTCAACTGTCACGGTCATCGCTATCACTTCCCATATGGTCTCGTCGA
CTTGTCCTCTGCTTTCATTCCACCCGTCAAACATGGGGATCCTCTTACCG
GCACCGATCCACGAGGATGAAGAGACCTCGATCGGAGTCTGTGCCCCGAC
TTCGTCCACCACGGTAGCCTTATCGCTGGGAGATGCACTGGCTATCGCTA
CGGCTCGGCGACTACATACAGCTCCTGGCAGAGGCCCGGCGGAGATCTTC
AAGGGCTTCCATCCTGGCGGGGCCATCGGCGCTGCGTCCATGGCTTTGAC
ACCTATGAGCATGTCATCTGCGTCAAGTTCTGCCGCCCCATCAGACTATA
TTCCTGCTCAACAGACCGCGACCTCCTTTCCGCAGTCAGACGACAAGCCT
AATCAGCGTTCTCTCGTCCGTGATATGCTCGTGTCACTCGATCAAATTCC
CCGGGTGTCTACTTCGGGTAAAGTCCGTCTTCTAGACATTCTCCTCACTG
CTATCCAGCACCCCAACGCCAAGTCATGGGTCCATCTCTCACCATCCGAA
ATCGTGCCCCCACGGCATCTCCGCTTCGTCTCCCAGAGCAACTATGTAGA
TATGCACGTTTCCGCCTTCACTGAGCTGGGTCTACCTTTCGGTGTCTCCC
GCAAGGATTGGTTCCGCCTCGCGAGCTCGAGCACCATCGACGACGCGCGA
CGGCTGGTTTCTGAGGCTGGTGCATCCTCAGGCACCCCCGTGACAGTGGT
GGCCGTCATGGACGAGACCAACCCTGACCATTGTGTTGGTGTCATAGAAG
CTGAGGATCTATGGAATGATTGTGATGACTAAATGGGGCACCTGAAGCAG
CCATTCGCGATCCCGCTGTCGCCCGCAATGCCCCTCCCGGAGTCCAACCC
CTCCATCCACGATGATTTCCTCCTTCCGATGACTCCTCCAGATCCCTCCG
AGGTCGCACTAATGGGAACCAAGGACACTGCGCCCGTGACTTCAGCCCTG
CAGGTTATCGCGGCGGAGCGCGCCGCTCTGGCGCATCTGGAGCATATCTA
CCAGACCGATCCGCTGGCACAAGATAACCTCGCGCGCGCGGTGGCTCAGA
TTGTGCGCACCATCAAGTATGGCGGGAAACTGGTCTGCTGTGGTGTCGGC
AAGAGTGGTAAGATTGCTCAGAAGCTTGAAGCCACCATGAATAGTATGGG
GATCTATAGTGCTTTTCTGCACCCCACGGAAGCCTTGCACGGCGACCTGG
GCATGATACGACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0097367 | carbohydrate derivative binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:1901135 | carbohydrate derivative metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035474 |
| DBxref | InterPro:IPR001347 |
| DBxref | PFAM:PF01380 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2342273..2343667 - |
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