You are here

Home

KJC3_002360-T1, KJC3_002360-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002360-T1
Unique NameKJC3_002360-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2356128..2357662-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002360-T1 ID=KJC3_002360-T1|Name=KJC3_002360-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1535bp|location=Sequence derived from alignment at ch2:2356128..2357662- (Aspergillus niger KJC3)
ATGGCTTCCGGCACTTTCTGTTCTTTCCCCAAGGTCATCATTGTCGGGGC
TGGGTTCTCCGGACTGGCAATGGCATGTCAATTAAAACGAGAGTTAAAGT
GCGATGACTTTGTTATTTATGACCGAGATGCAGGTTTTGGTGGGACGTGG
CTAGCAAACAAGTGTATTACTGATTATCCTCTCATCTTTTCCGGACGGAC
AACGCGGCCGCTGACCTGAGATTCTCAGACCCAGGATGTGGAGTTGATAT
CCCGGCCGCGTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAA
ACCTCTTTCCAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTA
ATGGAGTACGACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGG
GGCATCCTGGCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCG
TTACAACTGGCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCG
GTTGGCGCATTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCG
CTTCCAGGGAGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTC
TGCGGGACAAGAATGTAATAGTGCTTGGAAATGGGGGTAAGCTCTATCTT
GCACCAGCATGAAAAATCAATGATTGACACCGTTTAGCCTCAGCAACACA
ATTAGTACCAGCCGTGGCAGAAGATGTTCGGTCAATTACCCAATTTATGA
GGGTAAGTTCGCTATCACGATGCTCTTGTAGGGTGAATTTCTAATATATA
ATGATCGCATCCAGTCAAAACAATATTTTCTCCCAGGGGGAAATAACACC
ACTATCAGTCCAATTTGGCAGAATATCTTCCGCTACGTACCAGGTGTACT
TCTTGCCGTCAGATTTTTGATCTTCTTATACCTCGAAACGTCCACCCCCC
AATTCAACCTGACCAAGACCGGAGCGAAAATGCGAAGAGAAACCGCTGAA
ATAAGCGAGCGTTACGTCAAAGAAAATGCGCCAGGTGAGCCGAGTCCTGA
ATACCGTCTGAGCTACTCTGACCTCAACTCGCAGAGAAGTACTGGCCACT
CTTACTGGCCGACTATCAAGTCGGATGCAAGGTAGGTACCTTCAATCAGC
ATCCATCTGAAACATCCAGGCTGATGAACTCCTATTGCAGCGACGGGTAT
TCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATGTCCGCCTT
ACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCAACAAAATC
AGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGGGTTCTCTC
TGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCAGTCGACAA
GAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGTATCGGCAT
GTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTCCGGTCGCG
GGCATACATCTGCAGTATTCTCCATTGAGAAGTAA
back to top

Coding sequence (CDS) from alignment at ch2:2356128..2357662-

>KJC3_002360-T1 ID=KJC3_002360-T1|Name=KJC3_002360-T1|organism=Aspergillus niger KJC3|type=CDS|length=7488bp|location=Sequence derived from alignment at ch2:2356128..2357662- (Aspergillus niger KJC3)
CGACGGGTATTCGATCACGATGGCTACATTTCAACATTAAACCGTGATAA
TGTCCGCCTTACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCT
CAACAAAATCAGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAAC
GGGTTCTCTCTGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACG
CAGTCGACAAGAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGA
GTATCGGCATGTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAAT
TCCGGTCGCGGGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAG
TACTGGCCACTCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACA
ATATTTTCTCCCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGA
ATATCTTCCGCTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATC
TTCTTATACCTCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGG
AGCGAAAATGCGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAG
AAAATGCGCCAGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGAT
GTTCGGTCAATTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATC
CCGGCCGCGTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAA
CCTCTTTCCAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAA
TGGAGTACGACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGG
GCATCCTGGCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGT
TACAACTGGCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCGG
TTGGCGCATTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGC
TTCCAGGGAGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCT
GCGGGACAAGAATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACT
TTCTGTTCTTTCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACT
GGCAATGGCATGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTA
TTTATGACCGAGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGTCG
ACGGGTATTCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATG
TCCGCCTTACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCA
ACAAAATCAGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGG
GTTCTCTCTGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCA
GTCGACAAGAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGT
ATCGGCATGTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTC
CGGTCGCGGGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAGTA
CTGGCCACTCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACAAT
ATTTTCTCCCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGAAT
ATCTTCCGCTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATCTT
CTTATACCTCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGGAG
CGAAAATGCGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAGAA
AATGCGCCAGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGATGT
TCGGTCAATTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATCCC
GGCCGCGTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAACC
TCTTTCCAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAATG
GAGTACGACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGGGC
ATCCTGGCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGTTA
CAACTGGCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCGGTT
GGCGCATTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGCTT
CCAGGGAGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCTGC
GGGACAAGAATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACTTT
CTGTTCTTTCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACTGG
CAATGGCATGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTATT
TATGACCGAGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGTCGAC
GGGTATTCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATGTC
CGCCTTACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCAAC
AAAATCAGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGGGT
TCTCTCTGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCAGT
CGACAAGAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGTAT
CGGCATGTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTCCG
GTCGCGGGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAGTACT
GGCCACTCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACAATAT
TTTCTCCCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGAATAT
CTTCCGCTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATCTTCT
TATACCTCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGGAGCG
AAAATGCGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAGAAAA
TGCGCCAGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGATGTTC
GGTCAATTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATCCCGG
CCGCGTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAACCTC
TTTCCAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAATGGA
GTACGACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGGGCAT
CCTGGCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGTTACA
ACTGGCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCGGTTGG
CGCATTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGCTTCC
AGGGAGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCTGCGG
GACAAGAATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACTTTCT
GTTCTTTCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACTGGCA
ATGGCATGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTATTTA
TGACCGAGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGTCGACGG
GTATTCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATGTCCG
CCTTACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCAACAA
AATCAGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGGGTTC
TCTCTGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCAGTCG
ACAAGAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGTATCG
GCATGTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTCCGGT
CGCGGGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAGTACTGG
CCACTCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACAATATTT
TCTCCCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGAATATCT
TCCGCTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATCTTCTTA
TACCTCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGGAGCGAA
AATGCGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAGAAAATG
CGCCAGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGATGTTCGG
TCAATTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATCCCGGCC
GCGTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAACCTCTT
TCCAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAATGGAGT
ACGACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGGGCATCC
TGGCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGTTACAAC
TGGCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCGGTTGGCG
CATTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGCTTCCAG
GGAGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCTGCGGGA
CAAGAATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACTTTCTGT
TCTTTCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACTGGCAAT
GGCATGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTATTTATG
ACCGAGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGTCGACGGGT
ATTCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATGTCCGCC
TTACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCAACAAAA
TCAGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGGGTTCTC
TCTGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCAGTCGAC
AAGAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGTATCGGC
ATGTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTCCGGTCG
CGGGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAGTACTGGCC
ACTCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACAATATTTTC
TCCCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGAATATCTTC
CGCTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATCTTCTTATA
CCTCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGGAGCGAAAA
TGCGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAGAAAATGCG
CCAGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGATGTTCGGTC
AATTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATCCCGGCCGC
GTTCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAACCTCTTTC
CAAAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAATGGAGTAC
GACCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGGGCATCCTG
GCAGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGTTACAACTG
GCGAGGAGTATACACAACGTTGTAACATACTAATATCAGCGGTTGGCGCA
TTGACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGCTTCCAGGG
AGATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCTGCGGGACA
AGAATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACTTTCTGTTC
TTTCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACTGGCAATGG
CATGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTATTTATGAC
CGAGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGTCGACGGGTAT
TCGATCACGATGGCTACATTTCAACATTAAACCGTGATAATGTCCGCCTT
ACCGACGATGAAGTCATCGCTCTTAACGAACGATCAGTCTCAACAAAATC
AGGAGCAACATACCCTGCCGATGTAGTTGTATTAGCCAACGGGTTCTCTC
TGACCCAATATGACACCGAGCTGTGCGGTCGCCGTGGACGCAGTCGACAA
GAATCCTGGAAAGGAGCCGGGTACATCAAAGCTTACGAGAGTATCGGCAT
GTCTGAGTTTCCTAACTTCTTCTACATTCTGGGTCCCAATTCCGGTCGCG
GGCATACATCTGCAGTATTCTCCATTGAGAAGTAAAGAAGTACTGGCCAC
TCTTACTGGCCGACTATCAAGTCGGATGCAAGTCAAAACAATATTTTCTC
CCAGGGGGAAATAACACCACTATCAGTCCAATTTGGCAGAATATCTTCCG
CTACGTACCAGGTGTACTTCTTGCCGTCAGATTTTTGATCTTCTTATACC
TCGAAACGTCCACCCCCCAATTCAACCTGACCAAGACCGGAGCGAAAATG
CGAAGAGAAACCGCTGAAATAAGCGAGCGTTACGTCAAAGAAAATGCGCC
AGCCTCAGCAACACAATTAGTACCAGCCGTGGCAGAAGATGTTCGGTCAA
TTACCCAATTTATGAGGACCCAGGATGTGGAGTTGATATCCCGGCCGCGT
TCTACAGTCTCTCCTTTGCACCTAACCCAGACTTCTCAAACCTCTTTCCA
AAGCGGGATGAGGTCCTACAATACATCAACAATGTGGTAATGGAGTACGA
CCTGTCCCGTCACCTGGTGGGAAATACGGAATGGATAGGGGCATCCTGGC
AGGACAACGACAATACTTGGCTCGTTAGCCTGCGGAGCGTTACAACTGGC
GAGGAGTATACACAACGTTGTAACATACTAATATCAGCGGTTGGCGCATT
GACAAACCCTAATCCACTGAATGTTCCCGGCGTCGACCGCTTCCAGGGAG
ATATCATTCACACAGCCAGGTGGGATCAGAGCGTGTCTCTGCGGGACAAG
AATGTAATAGTGCTTGGAAATGGGGATGGCTTCCGGCACTTTCTGTTCTT
TCCCCAAGGTCATCATTGTCGGGGCTGGGTTCTCCGGACTGGCAATGGCA
TGTCAATTAAAACGAGAGTTAAAGTGCGATGACTTTGTTATTTATGACCG
AGATGCAGGTTTTGGTGGGACGTGGCTAGCAAACAAGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002360KJC3_002360Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002360-T1KJC3_002360-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002360-T1.cdsKJC3_002360-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002360-T1.exon6KJC3_002360-T1.exon6Aspergillus niger KJC3exon
KJC3_002360-T1.exon5KJC3_002360-T1.exon5Aspergillus niger KJC3exon
KJC3_002360-T1.exon4KJC3_002360-T1.exon4Aspergillus niger KJC3exon
KJC3_002360-T1.exon3KJC3_002360-T1.exon3Aspergillus niger KJC3exon
KJC3_002360-T1.exon2KJC3_002360-T1.exon2Aspergillus niger KJC3exon
KJC3_002360-T1.exon1KJC3_002360-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_2.7
NoteantiSMASH:Cluster_2.8
NoteSECRETED:SignalP(1-25)
NoteSMCOG1092:hypothetical protein
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF13450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2356128..2357662 -
Powered by Drupal