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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2406088..2407283+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002375-T1 ID=KJC3_002375-T1|Name=KJC3_002375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1196bp|location=Sequence derived from alignment at ch2:2406088..2407283+ (Aspergillus niger KJC3)
AGCGCACATACATTACTATACCTCTTTTTCGTTCTCCTGTTCCTTTCCTT
CTGCTGCTATAGACTATCGTTGTGACCTCTCTCCACTTCCCAACGATGTC
CGAGTCAAATCCACTCCATCCAACCCTAACCCTCCCTCCAATAATCCTCG
GCGGCTCAGGCTTCAGCGACCAATCCCACCCCAATCCACAAACCCTCCCC
GTTGCAACAATCATCCGTCACGCCTTCGACGAAGGCATCCTTGCTATCGA
CACCTCCCCCTACTACCACCCCTCCGAGCACCTCCTCGGTACCGCCCTCT
CCGACCCCCAGATAACAACCCGCTACGCACGCAGCGACTACATTCTCATG
ACTAAAGTCGGGCGCCTCTCGACCAGCGCCTTTGACTATTCCCCCACCTG
GGTCCGCCAATCAGTCCACAACTCCCTCGAGCGCCTACACACCACCTATC
TAGACGTAGTCTTCTGCCACGACGTGGAATTCGTCTCGGAGCACGAAGCC
GTCGAAGCTGTCGGCGTGCTCTTCGACCTCCGCCGACAGGGCTATATCAA
GTACGTGGGCATCTCCGGCTATCCGCTCGAGACGCTAGTCTCTGTCGCGC
ATGCAGTGCGACACGTATATGGCCAGCCATTGGACGTCGTGCAGACCTGG
GCTCAGTTGACATTGCAGAACACTAAGCTGGAGCGGTATGGCATTCCGGC
TCTTCGTGAGGCTGGGGTGTCGGTGGTTTGTAATTCGAGTCCGCTTGCCT
CCGGGTTGTTGCGTGCGGGAAAGGTGCCTTGTGGGAGACTGGGGGATTGG
CATCCTGCGCCTGAGGGGCTGAGGAGCGCTGTGAGTATCGCTTCGGGTTG
GTTGGAGTGTCAGGGGTTCGGGTTGGCGGGGTTGGCGTTGCGGTTTTCGT
TGGCGAAAGCTGTGCGGGCTGCCGATAGATACGCCGTCTCTGTCTCTACT
GTCCTGGGGGTATCGTCCTTGAAGGATGTGGAAGAGGATGTGGAGGTTGC
CCGGGACATTTTACGTGATCTGGATGCTGGGCTTGTGTATAAAAGGATGG
AAGTGATGGGCGGCCTGTCGCGTCTTCGACGGGTGAATGAAGAGGTTGAA
TGTCGGGATTTACGGCTGTGTTATGGCGTGCGGAACATCTTGGGGGAATG
GGCTGAGTATGACTTGCAGAAATAAGACATTGCTGTATAAGTAGGA back to topCoding sequence (CDS) from alignment at ch2:2406088..2407283+ >KJC3_002375-T1 ID=KJC3_002375-T1|Name=KJC3_002375-T1|organism=Aspergillus niger KJC3|type=CDS|length=1080bp|location=Sequence derived from alignment at ch2:2406088..2407283+ (Aspergillus niger KJC3)
ATGTCCGAGTCAAATCCACTCCATCCAACCCTAACCCTCCCTCCAATAAT
CCTCGGCGGCTCAGGCTTCAGCGACCAATCCCACCCCAATCCACAAACCC
TCCCCGTTGCAACAATCATCCGTCACGCCTTCGACGAAGGCATCCTTGCT
ATCGACACCTCCCCCTACTACCACCCCTCCGAGCACCTCCTCGGTACCGC
CCTCTCCGACCCCCAGATAACAACCCGCTACGCACGCAGCGACTACATTC
TCATGACTAAAGTCGGGCGCCTCTCGACCAGCGCCTTTGACTATTCCCCC
ACCTGGGTCCGCCAATCAGTCCACAACTCCCTCGAGCGCCTACACACCAC
CTATCTAGACGTAGTCTTCTGCCACGACGTGGAATTCGTCTCGGAGCACG
AAGCCGTCGAAGCTGTCGGCGTGCTCTTCGACCTCCGCCGACAGGGCTAT
ATCAAGTACGTGGGCATCTCCGGCTATCCGCTCGAGACGCTAGTCTCTGT
CGCGCATGCAGTGCGACACGTATATGGCCAGCCATTGGACGTCGTGCAGA
CCTGGGCTCAGTTGACATTGCAGAACACTAAGCTGGAGCGGTATGGCATT
CCGGCTCTTCGTGAGGCTGGGGTGTCGGTGGTTTGTAATTCGAGTCCGCT
TGCCTCCGGGTTGTTGCGTGCGGGAAAGGTGCCTTGTGGGAGACTGGGGG
ATTGGCATCCTGCGCCTGAGGGGCTGAGGAGCGCTGTGAGTATCGCTTCG
GGTTGGTTGGAGTGTCAGGGGTTCGGGTTGGCGGGGTTGGCGTTGCGGTT
TTCGTTGGCGAAAGCTGTGCGGGCTGCCGATAGATACGCCGTCTCTGTCT
CTACTGTCCTGGGGGTATCGTCCTTGAAGGATGTGGAAGAGGATGTGGAG
GTTGCCCGGGACATTTTACGTGATCTGGATGCTGGGCTTGTGTATAAAAG
GATGGAAGTGATGGGCGGCCTGTCGCGTCTTCGACGGGTGAATGAAGAGG
TTGAATGTCGGGATTTACGGCTGTGTTATGGCGTGCGGAACATCTTGGGG
GAATGGGCTGAGTATGACTTGCAGAAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002375-T1.utr5p1 | KJC3_002375-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002375-T1.utr3p1 | KJC3_002375-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.9 |
| Note | SMCOG1039:aldo/keto reductase family oxidoreductase |
| DBxref | InterPro:IPR036812 |
| DBxref | InterPro:IPR023210 |
| DBxref | PFAM:PF00248 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2406088..2407283 + |
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