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KJC3_002390-T1, KJC3_002390-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002390-T1
Unique NameKJC3_002390-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2445117..2446784+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002390-T1 ID=KJC3_002390-T1|Name=KJC3_002390-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1668bp|location=Sequence derived from alignment at ch2:2445117..2446784+ (Aspergillus niger KJC3)
ATGCCATCGCACTCCTTCAAGCGCATCGGCATCGTCGGAGCCGGCAACAT
GGGCTCGATGATGAGCTTTGCCTTCACCGAGCTCGGCCTGGACGTATCCA
TCTGGGATGTGAAGCGCGAAAACGTCGACGGGATTAAGAAATGGTACGAC
GAAGGGAAATTCAGCGACAAGGGGAAAGTAGAAGGATTTTACGAGATCGA
CAAATTCACCAAGAGTCTCGAGGGTCAAGGGGAACGGAAATTATTCATTT
TCTCCATCACCCATGGCGACCCAGCAGACTCCGTCTTGGATATGATCCAG
AATGATCTGAAAAAGGGCGACATTATCCTCGATGGTGGAAACGAGAACTA
TCGACGAACTGAGCAACGACAGAAGCGATGCAAGGAACTCGGTGTCAGTT
GGATCGGCATGGGTGTCTCGGGCGGGTACCAATCGGCCCGCCATGGCCCG
AGTCTATCGCCTGGGGGAGATCCGGAAGCAATTGAGCTTGTCCTACCGTT
GTTGGAGCAGTATGCTGCCAAGGATGAAAAGACCGGCAAGCCTTGTGTAA
CTAATGTGGGACCTGCTGGTTCGGGTCATTTTGTGAAGATGGTCCATAAT
GGCATTGAGGGGGGTATGTTGTCTACCACGGCGGAGGCGTGGGCGCTCCT
CCACTGGGGATTGGGATTGGACTATCAAGAGATCTCCGATATCTTCGAAG
AGTGGAATACTAAGGGCGAGTTGCGGAAGAACTTCCTGCTCGACATTGGT
GTGCAAATCCTGCGCACAAAGAAGACTCCCCAGGGCGACTATCAAGGCGA
AGGCGCCAGCCAGAACGGCGGTTACGTGCTGGATGACGTGCTCGACAAAG
TGGTACAGGACGACGATGACACCGAAGGAACGCCCTACTGGTCCGTTATG
GAGACCGCAAACCGACATGTGGCCGGCCCTACGCTCGCCACGGCTCACTA
TATGCGCATCGCCAGTGGAAATCGTGCTGAGCGACTGGAGGTTGCCAAGA
AGCTCAAAATCCCCGGTCCGAAGGCCATCGAGACCAAGGATCGCAAGGAC
TTCATTGAGAAACTGCGTCGCGCTGTCTATTGCTCCTTCCTGGCTTCATT
CTGCCAAGGACTGGAGTTGATCGCGCGCGCATCCAAGGATGAGGGATGGA
ACGTCGATCTCAGCAAATGTATTCAGATCTGGCGTGGGGGATGTATCATT
CAGTCTGAAGCCATTGCAGATCTTCTACAACCGCTCCTGCGCCCGGATCT
GACCAACATGAAGTTCCTGGATGAGATCGCCAGCGAACTGCACAAGCACT
TTGACGCACTGAAGGAGGTGGTTCTGGCAGCAACTGTGGCAGATCAATAT
ATTCCCGCGCTGTCTGCGACATTAGAGTATCTGAAGTATGAAGGAGGGAC
GATGTTGCCTACCAAGTTCATGGAGGCGCAGATGGATCTGTTTGGGGCCC
ATGCCTACTATAAACCAGGCGTTCCTGGAGAGGATCCGGGCCCAGTGAAG
AAGGGACCTCACCACTACGAGTGGCGTCCAGCCTAATGCAGAGTTGTATC
CGTTGTATAGGGAAGATGATGACAATGTAATAAAGAAATTCACATGCTCA
CCATGTCATGGGCTTCCAACTTCTGTAGGCCGGGGCTTTTTTACAAATAG
ATTCTTTATATCCGTTAA
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Coding sequence (CDS) from alignment at ch2:2445117..2446784+

>KJC3_002390-T1 ID=KJC3_002390-T1|Name=KJC3_002390-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch2:2445117..2446784+ (Aspergillus niger KJC3)
ATGCCATCGCACTCCTTCAAGCGCATCGGCATCGTCGGAGCCGGCAACAT
GGGCTCGATGATGAGCTTTGCCTTCACCGAGCTCGGCCTGGACGTATCCA
TCTGGGATGTGAAGCGCGAAAACGTCGACGGGATTAAGAAATGGTACGAC
GAAGGGAAATTCAGCGACAAGGGGAAAGTAGAAGGATTTTACGAGATCGA
CAAATTCACCAAGAGTCTCGAGGGTCAAGGGGAACGGAAATTATTCATTT
TCTCCATCACCCATGGCGACCCAGCAGACTCCGTCTTGGATATGATCCAG
AATGATCTGAAAAAGGGCGACATTATCCTCGATGGTGGAAACGAGAACTA
TCGACGAACTGAGCAACGACAGAAGCGATGCAAGGAACTCGGTGTCAGTT
GGATCGGCATGGGTGTCTCGGGCGGGTACCAATCGGCCCGCCATGGCCCG
AGTCTATCGCCTGGGGGAGATCCGGAAGCAATTGAGCTTGTCCTACCGTT
GTTGGAGCAGTATGCTGCCAAGGATGAAAAGACCGGCAAGCCTTGTGTAA
CTAATGTGGGACCTGCTGGTTCGGGTCATTTTGTGAAGATGGTCCATAAT
GGCATTGAGGGGGGTATGTTGTCTACCACGGCGGAGGCGTGGGCGCTCCT
CCACTGGGGATTGGGATTGGACTATCAAGAGATCTCCGATATCTTCGAAG
AGTGGAATACTAAGGGCGAGTTGCGGAAGAACTTCCTGCTCGACATTGGT
GTGCAAATCCTGCGCACAAAGAAGACTCCCCAGGGCGACTATCAAGGCGA
AGGCGCCAGCCAGAACGGCGGTTACGTGCTGGATGACGTGCTCGACAAAG
TGGTACAGGACGACGATGACACCGAAGGAACGCCCTACTGGTCCGTTATG
GAGACCGCAAACCGACATGTGGCCGGCCCTACGCTCGCCACGGCTCACTA
TATGCGCATCGCCAGTGGAAATCGTGCTGAGCGACTGGAGGTTGCCAAGA
AGCTCAAAATCCCCGGTCCGAAGGCCATCGAGACCAAGGATCGCAAGGAC
TTCATTGAGAAACTGCGTCGCGCTGTCTATTGCTCCTTCCTGGCTTCATT
CTGCCAAGGACTGGAGTTGATCGCGCGCGCATCCAAGGATGAGGGATGGA
ACGTCGATCTCAGCAAATGTATTCAGATCTGGCGTGGGGGATGTATCATT
CAGTCTGAAGCCATTGCAGATCTTCTACAACCGCTCCTGCGCCCGGATCT
GACCAACATGAAGTTCCTGGATGAGATCGCCAGCGAACTGCACAAGCACT
TTGACGCACTGAAGGAGGTGGTTCTGGCAGCAACTGTGGCAGATCAATAT
ATTCCCGCGCTGTCTGCGACATTAGAGTATCTGAAGTATGAAGGAGGGAC
GATGTTGCCTACCAAGTTCATGGAGGCGCAGATGGATCTGTTTGGGGCCC
ATGCCTACTATAAACCAGGCGTTCCTGGAGAGGATCCGGGCCCAGTGAAG
AAGGGACCTCACCACTACGAGTGGCGTCCAGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006098pentose-phosphate shunt
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050661NADP binding
GO:0016491oxidoreductase activity
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002390KJC3_002390Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002390-T1.exon1KJC3_002390-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002390-T1.cdsKJC3_002390-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002390-T1.utr3p1KJC3_002390-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002390-T1KJC3_002390-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006115
DBxrefInterPro:IPR006113
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006114
DBxrefInterPro:IPR006183
DBxrefPFAM:PF03446
DBxrefPFAM:PF00393
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2445117..2446784 +
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