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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2463623..2464957- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002397-T1 ID=KJC3_002397-T1|Name=KJC3_002397-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1335bp|location=Sequence derived from alignment at ch2:2463623..2464957- (Aspergillus niger KJC3)
CACAGCCCGTCACACGTCAACTACTTATCGAAGAGATAGTAGAAAGTCTT
TTATAAGCTTCAGCCTTATTAGGGATACATATAATCTTCATTCCTTGCCC
CGACAATCTAATAACCACAGTCATTATCTAGGCAGAGTTGTTCGCCAGTA
TAACGAAATGATATCCTGCACTACCATTCCCGTGACAATCCCAAAGAATA
GCCCAGGTGGCCTAATACCCAAGGCCACAGCCAAAATCATCATCAGCACA
TTCCTCCCCTGCGAGTGGCCAAATGTGGATCCAGAGACCCTCACAGTGAC
ACGCACCACCGGATATGCAAATACGAATAGTGTTGTGGAGCGACCGAACC
CAAATGGCAGCGACACACCCCACTTGGAGCCATTCAAGGTATTCCTCAAG
ATTCACGGCGAACTTGACGGAGAAATCGAAGTCTTCGAGCATTTAGTTCC
TAGCAAGTTCGAAGAAGCGCAATTAAGCCACGAGTATGGTCAGTCTGGCC
ATGGGGCGAAAGTACTCGGCTTTTTCCAGACTCAGGATGGTGTCTTCGGG
AGGGTCGATGAGTACTTGGATGCACGTACCCTGGTGCCACAGGATGTCGA
AGACGCTGATACCCGAGGCGATGTTGCGAGAGCTCTTGCTACTTTCCATG
CTATGGATACGACCATACTGAAGAGGAGCCCTGTACAGGCATACTATGAT
GCTGTCACCAGGGAACTTGGCAAGTATCACGGGATGGACAAGCTGAAGAG
ACTGGCACATGCAGGGGGCATCTGCTTGGACCATCTCGTGGATTATGACT
TCGTGTATAGACTCCGACGGGTCATAGATAAGCTGGAATCAATCGGGACA
AAGGAAGGATGGTGCATTCATGATTTCCAATTTATGAATGTCTTGGTGAG
GAACAAGCCACAGGCAGGGGAAAGCAAAGTTGTTCTTATCGACTTCGAAT
TTGTGTTTCGCAATTACAGAGCCTTCGATATCGGCGCACACTTCTTGCAG
AAGTTGTTCCAATGGTTCAACGAGGATAGTCAAATTGCCGATTGTCGACC
TTATTCGGACGAGGAAAAGCGGCATTTTTGCGCGGAATATGCAAAACAGT
GGAATCAGAAAACAGGTGACTCGGATACGGGGGAGCAGGTTTTCGCGGAG
GCTGAGCTCGGGTTCATGCTGGCTATTACGTTTGAGATCCACAACATGCT
GTGTTTTATGGATCAGGATGATGATAAAGATCCGTTGAATCTCTTGTCGC
TTGATAAACTGTATAGGGAGTTCACCGACCAATATGTCAAGCTCGGGCTC
GAGCGCTGAACAGTGTATGCTAGTGCGTGGTAGAG back to topCoding sequence (CDS) from alignment at ch2:2463623..2464957- >KJC3_002397-T1 ID=KJC3_002397-T1|Name=KJC3_002397-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch2:2463623..2464957- (Aspergillus niger KJC3)
ATGATATCCTGCACTACCATTCCCGTGACAATCCCAAAGAATAGCCCAGG
TGGCCTAATACCCAAGGCCACAGCCAAAATCATCATCAGCACATTCCTCC
CCTGCGAGTGGCCAAATGTGGATCCAGAGACCCTCACAGTGACACGCACC
ACCGGATATGCAAATACGAATAGTGTTGTGGAGCGACCGAACCCAAATGG
CAGCGACACACCCCACTTGGAGCCATTCAAGGTATTCCTCAAGATTCACG
GCGAACTTGACGGAGAAATCGAAGTCTTCGAGCATTTAGTTCCTAGCAAG
TTCGAAGAAGCGCAATTAAGCCACGAGTATGGTCAGTCTGGCCATGGGGC
GAAAGTACTCGGCTTTTTCCAGACTCAGGATGGTGTCTTCGGGAGGGTCG
ATGAGTACTTGGATGCACGTACCCTGGTGCCACAGGATGTCGAAGACGCT
GATACCCGAGGCGATGTTGCGAGAGCTCTTGCTACTTTCCATGCTATGGA
TACGACCATACTGAAGAGGAGCCCTGTACAGGCATACTATGATGCTGTCA
CCAGGGAACTTGGCAAGTATCACGGGATGGACAAGCTGAAGAGACTGGCA
CATGCAGGGGGCATCTGCTTGGACCATCTCGTGGATTATGACTTCGTGTA
TAGACTCCGACGGGTCATAGATAAGCTGGAATCAATCGGGACAAAGGAAG
GATGGTGCATTCATGATTTCCAATTTATGAATGTCTTGGTGAGGAACAAG
CCACAGGCAGGGGAAAGCAAAGTTGTTCTTATCGACTTCGAATTTGTGTT
TCGCAATTACAGAGCCTTCGATATCGGCGCACACTTCTTGCAGAAGTTGT
TCCAATGGTTCAACGAGGATAGTCAAATTGCCGATTGTCGACCTTATTCG
GACGAGGAAAAGCGGCATTTTTGCGCGGAATATGCAAAACAGTGGAATCA
GAAAACAGGTGACTCGGATACGGGGGAGCAGGTTTTCGCGGAGGCTGAGC
TCGGGTTCATGCTGGCTATTACGTTTGAGATCCACAACATGCTGTGTTTT
ATGGATCAGGATGATGATAAAGATCCGTTGAATCTCTTGTCGCTTGATAA
ACTGTATAGGGAGTTCACCGACCAATATGTCAAGCTCGGGCTCGAGCGCT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002397-T1.utr3p1 | KJC3_002397-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002397-T1.utr5p1 | KJC3_002397-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | PFAM:PF01633 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2463623..2464957 - |
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