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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2473352..2474251- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002401-T1 ID=KJC3_002401-T1|Name=KJC3_002401-T1|organism=Aspergillus niger KJC3|type=mRNA|length=900bp|location=Sequence derived from alignment at ch2:2473352..2474251- (Aspergillus niger KJC3)
TTCTCTTTCTCTCTCTCCCCCCCCCCATTCTTCTCTTCTCCCTGAATAAA
TAACTGGGGTTATAATAATCCGAACCGATTTATTTTCCATAACGATCACA
ATAATTGAGAAATTTTGAAAGAAAGTCATTTCCCCCAACGTCCATCCACT
ATGTGCAAAACCGACACTGTGCTCTCCATCCTCTGTGGAACATGGAATCT
AGACTCTGAAGAAGAGATGCAAATGATATTTTACGAGAACGGCACGGGCG
AAGTGAGTTTGTCTGATATCTAGACACCCTTAACTATTGCTAATCAGCAC
AGTTAATTCTCCGTCATATATTCAACGCGTGGATCGCTGCTGAGACTGAA
TGGAAGTCACTTGGCCCTCAGCCACTCGACCAGATTTCTGTCAGCGACAG
CGACACTACCTCTCAAACAGAGGCACAAGTCCTAGCGCACTTCAATCTAG
AAATAACACTCACAAAACGCGCCATCACAACACGCGGCTCAACAGATGAC
TACATCTTAAACGAAGAGAATCTCATCAACGCCGCCTTCCTCCCTAAAAG
ATACTCCGTCCGGTTGGAAAAAGGCTCGTTCAAAACAGCCTTCGAGCGGG
CAGCGGGACCGGTGCGTCCGTGGCGCCAGTCGTATGCTTATCAGCTGGTT
TTTGATAAATCGCCGTATCCACCGCTGAATGAATGGAAGGATCCGGAGGA
GGCGCCTGAGCCGCCGTTTTTGCCGTTTGAGGAATGGAGGGAGTTTTGTA
GTCGGGCGTTGCCGAAGGATGGGCAGGCATAGAATATGGGGTGATGTTGT
AGATAGTTTGGTTATTTATGATGGTATGACGGTATCATCTATAAACCGTG
TCTTCACTGCATAAATAAACAGTTATCTATATCCTCTCCAACAAATGCAT
back to topCoding sequence (CDS) from alignment at ch2:2473352..2474251- >KJC3_002401-T1 ID=KJC3_002401-T1|Name=KJC3_002401-T1|organism=Aspergillus niger KJC3|type=CDS|length=1164bp|location=Sequence derived from alignment at ch2:2473352..2474251- (Aspergillus niger KJC3)
TTAATTCTCCGTCATATATTCAACGCGTGGATCGCTGCTGAGACTGAATG
GAAGTCACTTGGCCCTCAGCCACTCGACCAGATTTCTGTCAGCGACAGCG
ACACTACCTCTCAAACAGAGGCACAAGTCCTAGCGCACTTCAATCTAGAA
ATAACACTCACAAAACGCGCCATCACAACACGCGGCTCAACAGATGACTA
CATCTTAAACGAAGAGAATCTCATCAACGCCGCCTTCCTCCCTAAAAGAT
ACTCCGTCCGGTTGGAAAAAGGCTCGTTCAAAACAGCCTTCGAGCGGGCA
GCGGGACCGGTGCGTCCGTGGCGCCAGTCGTATGCTTATCAGCTGGTTTT
TGATAAATCGCCGTATCCACCGCTGAATGAATGGAAGGATCCGGAGGAGG
CGCCTGAGCCGCCGTTTTTGCCGTTTGAGGAATGGAGGGAGTTTTGTAGT
CGGGCGTTGCCGAAGGATGGGCAGGCATAGATGTGCAAAACCGACACTGT
GCTCTCCATCCTCTGTGGAACATGGAATCTAGACTCTGAAGAAGAGATGC
AAATGATATTTTACGAGAACGGCACGGGCGAATTAATTCTCCGTCATATA
TTCAACGCGTGGATCGCTGCTGAGACTGAATGGAAGTCACTTGGCCCTCA
GCCACTCGACCAGATTTCTGTCAGCGACAGCGACACTACCTCTCAAACAG
AGGCACAAGTCCTAGCGCACTTCAATCTAGAAATAACACTCACAAAACGC
GCCATCACAACACGCGGCTCAACAGATGACTACATCTTAAACGAAGAGAA
TCTCATCAACGCCGCCTTCCTCCCTAAAAGATACTCCGTCCGGTTGGAAA
AAGGCTCGTTCAAAACAGCCTTCGAGCGGGCAGCGGGACCGGTGCGTCCG
TGGCGCCAGTCGTATGCTTATCAGCTGGTTTTTGATAAATCGCCGTATCC
ACCGCTGAATGAATGGAAGGATCCGGAGGAGGCGCCTGAGCCGCCGTTTT
TGCCGTTTGAGGAATGGAGGGAGTTTTGTAGTCGGGCGTTGCCGAAGGAT
GGGCAGGCATAGATGTGCAAAACCGACACTGTGCTCTCCATCCTCTGTGG
AACATGGAATCTAGACTCTGAAGAAGAGATGCAAATGATATTTTACGAGA
ACGGCACGGGCGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002401-T1.utr3p1 | KJC3_002401-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002401-T1.utr5p1 | KJC3_002401-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2473352..2474251 - |
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