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KJC3_002405-T1, KJC3_002405-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002405-T1
Unique NameKJC3_002405-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2483456..2485277+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002405-T1 ID=KJC3_002405-T1|Name=KJC3_002405-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1822bp|location=Sequence derived from alignment at ch2:2483456..2485277+ (Aspergillus niger KJC3)
ATCCGGCTGACTACTCCGCAGTAGACCGGTCCTATAAATACCCGTTGTCC
CTACCTCTGGCCTCCTGCCCAAAATCCTGTAAATCGCCCACCTGAATCCA
CCATGGCATCGTTGAACCATCTGCCCATGGAGCTTCTTCTCTGGGTAGTT
AGATACCTGGCCACTCAGGGAGATATTAGTCACCTAATGCAGGCGACCAA
GCATCTGTATCACACGCTGCACCCATTTCTCTGCGAGTACAACGTTCGAC
ACAATGGCAGCTCAGCTCTACTTTGGGCTGCTCAGAACGGGGAGACTCCC
TTGGTGACCAAACTGCTCGCCGCAGGCGCTAATATTGCCGCCTATGTTCC
TCCAGCCCGGTATGTGGAAAGGAAGGTTAGGAACCGTCGGAATATTGACC
CTTGGGCCAAGAAGAATCCTTTGTTATACGCGGCCCAAGGGGGGCACATA
CAGATTCTGAAATTGCTACTCGGGGAGACCCGGTCGGGCCAGGCAGCATC
GCCGGCCCAGCTGCGCTCGGTTCTGCATTGGGCGCTTAACCAGCACGATG
AAAAGCTAGTCGAGCTAATGCTAGCCCACAAAGCCCCCTTGGACCCTGCA
ACCGAGTCAAGTGGCGCACCTTCCGCCCTCGGAGTCGCCATGGCTGCGGG
CTACACGACAATCCTCTCCCGACTCCTAGCCCTTGGCGCACGCCCGGGAC
CCGATGAGACCCCGTGCCCAACCCAGCTGGCCATTTGTGCCAACAATCAT
CACTTTGTCCGGTTGTTCCTAGACCGTGGGTGGGGTCTCAACACTGATGA
GGGGCTTAACCACATTGCCCATGAAGACGACCGCGCCATGCTACAACTCC
TATTCGAGTACGGCCTCGATCTCCAGGCGTGCAGCCCCGTACCCCTGTTT
ACTGCAATACGAGATGGCCACTACGAGATGGCCGAGCTTCTTATTGATAA
CGGTATACAAAAAGACTTGAGTTGTGTGCTCCATCCCCGGTCTGGTTTTC
CTTGGGGAAGTGAATATGGCGCGGTCGGTTTTGCTATACTATACGAGCGG
TTGGACATCCTGAGGCTTCTCCTTGACAAAGGGTTTCTTCCCGAACCACG
AGACTTTGAGTTGGCATCAGAACGGGATCTGGTCGAGGCCGTTTCACTTT
TGAAGCCTTTTGCAGAACAAGATTTACGCGCGCATATGAGCATCGAAAAC
TCTCTCTGCTGGGGGTTCAATTATGACCCGGGTAACGATAGACCCCGGAA
CCCAAGCTTGTGGAAAATGCGATGTCATACCGTGGGCATAATCGATACAT
CTGGGACAAGGGAACCAGACCCGGAAGACCCATTCGACGGCCGCGTAGCT
TGCGGTCCTTCGCTGTGGGACTCGGACGGCGACCACAGCTCGGAGCTTGA
AGAATACTATAGGCAGAACCCGCCGACCAACTATTTCCTGATCAGCTAGT
AGATGTCACGTTGACGGAGGAACGGGGGGTAGGGAATGTTTTAGTTTAAG
TGAGTATGAACTACAAAGGCTTTTGAGAAGGTGGATGACGAGGAGAGAGG
CCAGGGAAGGCAGCAAGGGTGACGGATGATGTGATGAGTACCTGGCTACA
GTGAATTTCTCGACAATAGATGCAGGTAATTTCTTGGCACTAATCAGCTA
ATGTAAATACATACAATGAATACTGTAGTAACGCATGATCCTGTGGCGCT
ATCCACAAATGAAGGACACAGTGGCCACAGGGTAGATTCGGCTATGCGGA
AGCTGCCGGAAAGCTGAGCAAGGTAGCGAGGTAGTAGCACTAATCGAACT
AATGCAGGTGGTGCAGGTGGGC
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Coding sequence (CDS) from alignment at ch2:2483456..2485277+

>KJC3_002405-T1 ID=KJC3_002405-T1|Name=KJC3_002405-T1|organism=Aspergillus niger KJC3|type=CDS|length=1347bp|location=Sequence derived from alignment at ch2:2483456..2485277+ (Aspergillus niger KJC3)
ATGGCATCGTTGAACCATCTGCCCATGGAGCTTCTTCTCTGGGTAGTTAG
ATACCTGGCCACTCAGGGAGATATTAGTCACCTAATGCAGGCGACCAAGC
ATCTGTATCACACGCTGCACCCATTTCTCTGCGAGTACAACGTTCGACAC
AATGGCAGCTCAGCTCTACTTTGGGCTGCTCAGAACGGGGAGACTCCCTT
GGTGACCAAACTGCTCGCCGCAGGCGCTAATATTGCCGCCTATGTTCCTC
CAGCCCGGTATGTGGAAAGGAAGGTTAGGAACCGTCGGAATATTGACCCT
TGGGCCAAGAAGAATCCTTTGTTATACGCGGCCCAAGGGGGGCACATACA
GATTCTGAAATTGCTACTCGGGGAGACCCGGTCGGGCCAGGCAGCATCGC
CGGCCCAGCTGCGCTCGGTTCTGCATTGGGCGCTTAACCAGCACGATGAA
AAGCTAGTCGAGCTAATGCTAGCCCACAAAGCCCCCTTGGACCCTGCAAC
CGAGTCAAGTGGCGCACCTTCCGCCCTCGGAGTCGCCATGGCTGCGGGCT
ACACGACAATCCTCTCCCGACTCCTAGCCCTTGGCGCACGCCCGGGACCC
GATGAGACCCCGTGCCCAACCCAGCTGGCCATTTGTGCCAACAATCATCA
CTTTGTCCGGTTGTTCCTAGACCGTGGGTGGGGTCTCAACACTGATGAGG
GGCTTAACCACATTGCCCATGAAGACGACCGCGCCATGCTACAACTCCTA
TTCGAGTACGGCCTCGATCTCCAGGCGTGCAGCCCCGTACCCCTGTTTAC
TGCAATACGAGATGGCCACTACGAGATGGCCGAGCTTCTTATTGATAACG
GTATACAAAAAGACTTGAGTTGTGTGCTCCATCCCCGGTCTGGTTTTCCT
TGGGGAAGTGAATATGGCGCGGTCGGTTTTGCTATACTATACGAGCGGTT
GGACATCCTGAGGCTTCTCCTTGACAAAGGGTTTCTTCCCGAACCACGAG
ACTTTGAGTTGGCATCAGAACGGGATCTGGTCGAGGCCGTTTCACTTTTG
AAGCCTTTTGCAGAACAAGATTTACGCGCGCATATGAGCATCGAAAACTC
TCTCTGCTGGGGGTTCAATTATGACCCGGGTAACGATAGACCCCGGAACC
CAAGCTTGTGGAAAATGCGATGTCATACCGTGGGCATAATCGATACATCT
GGGACAAGGGAACCAGACCCGGAAGACCCATTCGACGGCCGCGTAGCTTG
CGGTCCTTCGCTGTGGGACTCGGACGGCGACCACAGCTCGGAGCTTGAAG
AATACTATAGGCAGAACCCGCCGACCAACTATTTCCTGATCAGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002405KJC3_002405Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002405-T1.utr5p1KJC3_002405-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002405-T1.exon1KJC3_002405-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002405-T1.cdsKJC3_002405-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002405-T1.utr3p1KJC3_002405-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002405-T1KJC3_002405-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2483456..2485277 +
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