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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2485368..2487392+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002406-T1 ID=KJC3_002406-T1|Name=KJC3_002406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2025bp|location=Sequence derived from alignment at ch2:2485368..2487392+ (Aspergillus niger KJC3)
TATCAATGGCCATGACCCCTTAGGTGTACATTTCCGTCCCCGCCCCTACA
TAGACGACCAAGGTAATTGAGTGGCTTCAGTAATTAAGCAACATGGTTTC
CAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCCTCGCCG
TCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACCGACCCC
AATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTCAACAGA
TACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACACAGCTAA
CTTCCTGGGTAACATTACCTTCTTCTTATCCTGAATATGGTTGGGACTGA
TGTATTAAAGAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGG
GCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCC
ACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGC
GGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGC
AAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGT
GATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCA
ATTCTACTCCTGGAATCCGTGAGTGCCCACCAATTAATTTACACTGTTTC
CTTCAGCGGTTGAACAGAAGCACAGGGCCGTGAAGTCCGACTGCTCCGGC
CTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGT
AGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACAT
CTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTGTATA
ACTCTCTATATGAATCATCCCCGCTGACGGTCGAACTAATGCTAGCCAGG
CGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGACATCGCTA
CCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGTA
GGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGT
TTCTGGTGAGTATGCCCTGAGCACCTACAACTACTTTCTCCATGTAGAGC
TCTATTCAAGGCAAACTAATGAACTCCAGGTGGTGCCACCGCAACCACCA
CAACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCACC
AGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCAC
CTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACA
AATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTC
GGATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCCAC
GCAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTGGC
ACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGT
GTTACTGCGAGTCAGTTCAATATGTGGAATCCGTACGTGGGTTCTTCTTG
TGCAAATTTGTGGTTGGGGTATTGGGTTTGTGTGGGTGTTTGATAGGTCT
TAGGGCGGGGGCGGTATGGGGGTTTAGAGAAGACCTTGTTGCCCTTATTA
GCCCAGAGTCAATAGTTATTTCAAGGTCTTGCAAGGGTGGGGGATCCATG
GCCCGGAGTGAATTAACTTTCTGCAACGTGGGCGATAACTGCAGAGAAAA
GATGAGGGTAACGACGGTGAGATCCAGAAGGCTTACAAACAACGTGCAAT
AGCCACCGCAATCTATATGTTGGCGTCAAAGAGTGGTAGACCAGTTCTCG
CTGAAAAAATGAATAAGAAACAAAAACATACAACAGAAGGGATTCGCTGG
TGGTCACCCACCCAACTACTAACCTCCCGGCGTGTGGCTTAAGTACGGCT
GAGCGGACGGGAAGCCCTGTTTTCC back to topCoding sequence (CDS) from alignment at ch2:2485368..2487392+ >KJC3_002406-T1 ID=KJC3_002406-T1|Name=KJC3_002406-T1|organism=Aspergillus niger KJC3|type=CDS|length=6570bp|location=Sequence derived from alignment at ch2:2485368..2487392+ (Aspergillus niger KJC3)
ATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGC
CCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACA
CCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGC
TCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCAC
ACAGCTAACTTCCTGGAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCC
AAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCC
TCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTAC
TACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCC
CGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAA
GCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCT
AAATCAATTCTACTCCTGGAATCCGGCCGTGAAGTCCGACTGCTCCGGCC
TACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTA
GCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATC
TACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTGCGATA
AATATTACTATGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAAC
CACGACATCAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAAC
AACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTG
GTGGTGCCACCGCAACCACCACAACATCTACCTCCACATCAACATCAACT
GTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCAACCCAATCGGG
TCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCT
GCTGGTTCATTGTCAACGACAAATACACCTACCTAACGACCTCCCTCTTC
GAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGG
ATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGA
TCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGG
TCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAA
TCCGTACGTGGGTTCTTCTTGTGCAAATTTGTGGTTGGGGTATTGGGTTT
GTGTGGGTGTTTGAATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTC
GCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTT
CCCAACTGGTGACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGG
CGAATTCCATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTAT
GGCATTACGTCCACACAGCTAACTTCCTGGAACCCTTCTCTTTCAACTAC
CAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTG
TATCAACCACAGCCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCG
CTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGC
GGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGT
TTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTAC
GGCAACTTTACGCTAAATCAATTCTACTCCTGGAATCCGGCCGTGAAGTC
CGACTGCTCCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCG
GAGATACCACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCC
TCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGC
ATCTAACTGCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTG
ACATCGCTACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAAC
CCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTG
CGTTGGTGTTTCTGGTGGTGCCACCGCAACCACCACAACATCTACCTCCA
CATCAACATCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCT
CCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAA
ATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAA
CGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGT
AACCTGCAACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCC
AATGCCCGACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACG
GGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAG
TTCAATATGTGGAATCCGTACGTGGGTTCTTCTTGTGCAAATTTGTGGTT
GGGGTATTGGGTTTGTGTGGGTGTTTGAATGGTTTCCAGCCTTTTCCTTA
CTCTCGCTACCTTCGCATCGGCCTATGCCCTCGCCGTCAATAAGAGATTT
GATAATGGCGACTTCCCAACTGGTGACACCGACCCCAATGTTACGAGTGC
ATGTACGTACTGGGCGAATTCCATTAGCTCAACAGATACATGTGCGGACC
TTGAGAGCTACTATGGCATTACGTCCACACAGCTAACTTCCTGGAACCCT
TCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGCTGGAGCTACTGTGT
TAGCGCGCCAGCTGTATCAACCACAGCCTCATCCACCAGCACTGTGTCCA
CGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGGCACCTGCTCCAGGT
ACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAAGGCGGCCTGAGCTC
GAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGATTCATGCTGGGCAA
TTGTTAACTCGTACGGCAACTTTACGCTAAATCAATTCTACTCCTGGAAT
CCGGCCGTGAAGTCCGACTGCTCCGGCCTACAACCGGACTATTATGTCTG
TATCGGTGTCGCCGGAGATACCACAGTAGCCTCGCAGACGACGCTTCCTG
CTACCACTACTGCCTCAGCGGCTACATCTACTGGGTCTTACCTGCCTGAG
CAGACGGGAATCGCATCTAACTGCGATAAATATTACTATGTTCAACACGG
GGACACTTGCTCTGACATCGCTACCAACCACGACATCAGCCTAAACGACT
TCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTAGTGACCTGGAGGCT
GACTATTGGGTCTGCGTTGGTGTTTCTGGTGGTGCCACCGCAACCACCAC
AACATCTACCTCCACATCAACATCAACTGTGAGCAGCACAACACCCACCA
GCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAGGTGACTGTTCCACC
TACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTCATTGTCAACGACAA
ATACACCTACCTAACGACCTCCCTCTTCGAAGAATGGAACCCCGCCGTCG
GATCAGACTGCAGTAACCTGCAACCGGGATACTATTACTGTGTGGCCACG
CAGAAGCAGGCGCCAATGCCCGACACGATCGATACATGCAAGAAGTGGCA
CTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGAGCAGGACGCAGGTG
TTACTGCGAGTCAGTTCAATATGTGGAATCCGTACGTGGGTTCTTCTTGT
GCAAATTTGTGGTTGGGGTATTGGGTTTGTGTGGGTGTTTGAATGGTTTC
CAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGCCTATGCCCTCGCCG
TCAATAAGAGATTTGATAATGGCGACTTCCCAACTGGTGACACCGACCCC
AATGTTACGAGTGCATGTACGTACTGGGCGAATTCCATTAGCTCAACAGA
TACATGTGCGGACCTTGAGAGCTACTATGGCATTACGTCCACACAGCTAA
CTTCCTGGAACCCTTCTCTTTCAACTACCAGCTGTGCTCTCCAAGAGGGC
TGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACCACAGCCTCATCCAC
CAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTCTACTACTACGGCGG
CACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCCCTTCCCCGACGCAA
GGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTACGTTGAAGCCGGTGA
TTCATGCTGGGCAATTGTTAACTCGTACGGCAACTTTACGCTAAATCAAT
TCTACTCCTGGAATCCGGCCGTGAAGTCCGACTGCTCCGGCCTACAACCG
GACTATTATGTCTGTATCGGTGTCGCCGGAGATACCACAGTAGCCTCGCA
GACGACGCTTCCTGCTACCACTACTGCCTCAGCGGCTACATCTACTGGGT
CTTACCTGCCTGAGCAGACGGGAATCGCATCTAACTGCGATAAATATTAC
TATGTTCAACACGGGGACACTTGCTCTGACATCGCTACCAACCACGACAT
CAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGTAGGAACAACCTGTA
GTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTGTTTCTGGTGGTGCC
ACCGCAACCACCACAACATCTACCTCCACATCAACATCAACTGTGAGCAG
CACAACACCCACCAGCAACGCTCCATCTCCAACCCAATCGGGTCTAGTAG
GTGACTGTTCCACCTACTACGAAGCCAAATCCGGAGACAGCTGCTGGTTC
ATTGTCAACGACAAATACACCTACCTAACGACCTCCCTCTTCGAAGAATG
GAACCCCGCCGTCGGATCAGACTGCAGTAACCTGCAACCGGGATACTATT
ACTGTGTGGCCACGCAGAAGCAGGCGCCAATGCCCGACACGATCGATACA
TGCAAGAAGTGGCACTTGGTAGCGGACGGGGATAATTGCTGGTCAATAGA
GCAGGACGCAGGTGTTACTGCGAGTCAGTTCAATATGTGGAATCCGTACG
TGGGTTCTTCTTGTGCAAATTTGTGGTTGGGGTATTGGGTTTGTGTGGGT
GTTTGAATGGTTTCCAGCCTTTTCCTTACTCTCGCTACCTTCGCATCGGC
CTATGCCCTCGCCGTCAATAAGAGATTTGATAATGGCGACTTCCCAACTG
GTGACACCGACCCCAATGTTACGAGTGCATGTACGTACTGGGCGAATTCC
ATTAGCTCAACAGATACATGTGCGGACCTTGAGAGCTACTATGGCATTAC
GTCCACACAGCTAACTTCCTGGAACCCTTCTCTTTCAACTACCAGCTGTG
CTCTCCAAGAGGGCTGGAGCTACTGTGTTAGCGCGCCAGCTGTATCAACC
ACAGCCTCATCCACCAGCACTGTGTCCACGGTCTCTTCCTCGCTCCTGTC
TACTACTACGGCGGCACCTGCTCCAGGTACGACCACCGGCGCGGGTAGCC
CTTCCCCGACGCAAGGCGGCCTGAGCTCGAGCTGTGACGCGTTTTACTAC
GTTGAAGCCGGTGATTCATGCTGGGCAATTGTTAACTCGTACGGCAACTT
TACGCTAAATCAATTCTACTCCTGGAATCCGGCCGTGAAGTCCGACTGCT
CCGGCCTACAACCGGACTATTATGTCTGTATCGGTGTCGCCGGAGATACC
ACAGTAGCCTCGCAGACGACGCTTCCTGCTACCACTACTGCCTCAGCGGC
TACATCTACTGGGTCTTACCTGCCTGAGCAGACGGGAATCGCATCTAACT
GCGATAAATATTACTATGTTCAACACGGGGACACTTGCTCTGACATCGCT
ACCAACCACGACATCAGCCTAAACGACTTCTACTCCTGGAACCCAGCTGT
AGGAACAACCTGTAGTGACCTGGAGGCTGACTATTGGGTCTGCGTTGGTG
TTTCTGGTGGTGCCACCGCAACCACCACAACATCTACCTCCACATCAACA
TCAACTGTGAGCAGCACAACACCCACCAGCAACGCTCCATCTCCAACCCA
ATCGGGTCTAGTAGGTGACTGTTCCACCTACTACGAAGCCAAATCCGGAG
ACAGCTGCTGGTTCATTGTCAACGACAAATACACCTACCTAACGACCTCC
CTCTTCGAAGAATGGAACCCCGCCGTCGGATCAGACTGCAGTAACCTGCA
ACCGGGATACTATTACTGTGTGGCCACGCAGAAGCAGGCGCCAATGCCCG
ACACGATCGATACATGCAAGAAGTGGCACTTGGTAGCGGACGGGGATAAT
TGCTGGTCAATAGAGCAGGACGCAGGTGTTACTGCGAGTCAGTTCAATAT
GTGGAATCCGTACGTGGGTTCTTCTTGTGCAAATTTGTGGTTGGGGTATT
GGGTTTGTGTGGGTGTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002406-T1.utr5p1 | KJC3_002406-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002406-T1.utr3p1 | KJC3_002406-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:CBM50 |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2485368..2487392 + |
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