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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2498924..2499792- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002410-T1 ID=KJC3_002410-T1|Name=KJC3_002410-T1|organism=Aspergillus niger KJC3|type=mRNA|length=869bp|location=Sequence derived from alignment at ch2:2498924..2499792- (Aspergillus niger KJC3)
GACCATAAAGCCGGACTACATCTCCATCCAGCAAGTACAGCATTATACAG
AGGTCTGATCATGTGGAGCTTCAGCTTTAGAGACCGAGTTTTCGACATCG
CAGGGGAAGATTTCAAGGTGGTAAAGCAGTTGACCGAGGAGGACGATGAA
GAACTGGGGCAACGCAAGGTTCAAGCAATAGCCAGGAGACTAGACCAAAA
ATACTTGCTCAAGATACGCTATCAGCTTGACCCAAAAGACTGTGATCTAG
ACGATCCAAAGGAGATATTGGAGTTTTCCGAACAGGACTTCTGCCATGAA
GCTGAGCTCACACAACTCCTGTCTACTCACGGATATGGGCCAAGGTATCA
TAATCATGAGACCCAGAATCAGCCTGAATGGATGCCTTTTCCTGGAGGCT
ATCTCGAATTCATCGTCATGGACTTTCCACCTGGGGAGAACGTTGACGAG
ATCCAATTTGATCTCACCGATCGCCAGCGCAAGAGCATCAGAACCAAGCT
AGCGAATCTATTGGAGTAAGTCAATTTGTTTTTACTACACGTACTGCAGG
GCATTGTTCGTTCTTCAATAACGGATGCTGACAAACTGGCAGGCTGATGC
GCAAGAACGACTACAGTATGAGCGAGCAGCACCCCAGCTACCTTCATTAC
GATGCTCAGGCGGACAACCTTTACTTGGTGGATCTTTCGGGCTTTGGATA
CATTGACTCAGCCAAATCCTATCCGATCGATGAGGAGAGTCCATTTGTGA
CAGCGTTTAATCTCTGGTGGAAGGAGTACCTCAAGTCTAGAGAAGGTCAG
GAGTCCAGCGGAATTCCATTGTCTCATCAACCAATCAAGAAGGAGAATCA
GCCCCCGGGAAAGACTTAA back to topCoding sequence (CDS) from alignment at ch2:2498924..2499792- >KJC3_002410-T1 ID=KJC3_002410-T1|Name=KJC3_002410-T1|organism=Aspergillus niger KJC3|type=CDS|length=1464bp|location=Sequence derived from alignment at ch2:2498924..2499792- (Aspergillus niger KJC3)
GCTGATGCGCAAGAACGACTACAGTATGAGCGAGCAGCACCCCAGCTACC
TTCATTACGATGCTCAGGCGGACAACCTTTACTTGGTGGATCTTTCGGGC
TTTGGATACATTGACTCAGCCAAATCCTATCCGATCGATGAGGAGAGTCC
ATTTGTGACAGCGTTTAATCTCTGGTGGAAGGAGTACCTCAAGTCTAGAG
AAGGTCAGGAGTCCAGCGGAATTCCATTGTCTCATCAACCAATCAAGAAG
GAGAATCAGCCCCCGGGAAAGACTTAAATGTGGAGCTTCAGCTTTAGAGA
CCGAGTTTTCGACATCGCAGGGGAAGATTTCAAGGTGGTAAAGCAGTTGA
CCGAGGAGGACGATGAAGAACTGGGGCAACGCAAGGTTCAAGCAATAGCC
AGGAGACTAGACCAAAAATACTTGCTCAAGATACGCTATCAGCTTGACCC
AAAAGACTGTGATCTAGACGATCCAAAGGAGATATTGGAGTTTTCCGAAC
AGGACTTCTGCCATGAAGCTGAGCTCACACAACTCCTGTCTACTCACGGA
TATGGGCCAAGGTATCATAATCATGAGACCCAGAATCAGCCTGAATGGAT
GCCTTTTCCTGGAGGCTATCTCGAATTCATCGTCATGGACTTTCCACCTG
GGGAGAACGTTGACGAGATCCAATTTGATCTCACCGATCGCCAGCGCAAG
AGCATCAGAACCAAGCTAGCGAATCTATTGGAGCTGATGCGCAAGAACGA
CTACAGTATGAGCGAGCAGCACCCCAGCTACCTTCATTACGATGCTCAGG
CGGACAACCTTTACTTGGTGGATCTTTCGGGCTTTGGATACATTGACTCA
GCCAAATCCTATCCGATCGATGAGGAGAGTCCATTTGTGACAGCGTTTAA
TCTCTGGTGGAAGGAGTACCTCAAGTCTAGAGAAGGTCAGGAGTCCAGCG
GAATTCCATTGTCTCATCAACCAATCAAGAAGGAGAATCAGCCCCCGGGA
AAGACTTAAATGTGGAGCTTCAGCTTTAGAGACCGAGTTTTCGACATCGC
AGGGGAAGATTTCAAGGTGGTAAAGCAGTTGACCGAGGAGGACGATGAAG
AACTGGGGCAACGCAAGGTTCAAGCAATAGCCAGGAGACTAGACCAAAAA
TACTTGCTCAAGATACGCTATCAGCTTGACCCAAAAGACTGTGATCTAGA
CGATCCAAAGGAGATATTGGAGTTTTCCGAACAGGACTTCTGCCATGAAG
CTGAGCTCACACAACTCCTGTCTACTCACGGATATGGGCCAAGGTATCAT
AATCATGAGACCCAGAATCAGCCTGAATGGATGCCTTTTCCTGGAGGCTA
TCTCGAATTCATCGTCATGGACTTTCCACCTGGGGAGAACGTTGACGAGA
TCCAATTTGATCTCACCGATCGCCAGCGCAAGAGCATCAGAACCAAGCTA
GCGAATCTATTGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002410-T1.utr5p1 | KJC3_002410-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2498924..2499792 - |
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