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KJC3_002416-T1, KJC3_002416-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002416-T1
Unique NameKJC3_002416-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2512674..2513491+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002416-T1 ID=KJC3_002416-T1|Name=KJC3_002416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=818bp|location=Sequence derived from alignment at ch2:2512674..2513491+ (Aspergillus niger KJC3)
ATGCAATTGATCACGCATTCTGATGGATGCGTCGTGTTCGTGGCTTTGGA
TATTTCTGACGAGTCAAGAATGGCCGAATCGGATGAGGAAGTCAGATCAG
CCTTGAACCAGCAAAGCCTAGACATGTTGATCAATTGCGCTGGTGTCCAT
AGTGAGACGCATGGAAAACTAGCGCTAATGTAAGCCTGATGACCTTGGTT
CCGTGGGTGTACTTCAAGCTGACACCAGACCGACAGGTCGGACCTTGAAT
ACCAATTGTCGGTGAATGTAACTGGAACGCATAACGTTCTTCGCCACTAT
CTTCCACTCATGCAGAACAGCAATGTCAAGAAAATCATCAATATGTGAGT
ATCATGTCCGAGGCCTGAACCTCATTCCCTAGCGGACACTCATAATTCAA
AACCACAGTTCGAGCGCATATGGCTCAATGACCAGTGCACGCGCAGTATC
ATACGCTCCTTGCCCAGCCTACAAGATCAGCAAAGCAGCACTGAACGCTT
TAACCGTCCAGTATGCGCTGTCCTACGAAGAGGAAGGATTTATCTTCCTC
TCAGTCAGTCCCGGCGTAAGTCACTACTCCCCGATCTATTGAAAAGCCAA
TGCCGGAGAAGCTAATAGAACCCCTCAGTGGCTCCAAAGCGACATGGGTG
GTAAGAATGCCGACCTGACCGTGCCACAGGGTGCTGAAGCAGTCTTGAGC
ATTTCCCTGTCCGCCGAACGTACGGACAATGGTCGGTTCAAGAATATCAG
CGTCCCAGGGTGGGAGGCTTATGATGGCCAGGATGTGCCCTGGTAGTCCA
ATATGGCAAATTCTTTTT
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Coding sequence (CDS) from alignment at ch2:2512674..2513491+

>KJC3_002416-T1 ID=KJC3_002416-T1|Name=KJC3_002416-T1|organism=Aspergillus niger KJC3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch2:2512674..2513491+ (Aspergillus niger KJC3)
ATGCAATTGATCACGCATTCTGATGGATGCGTCGTGTTCGTGGCTTTGGA
TATTTCTGACGAGTCAAGAATGGCCGAATCGGATGAGGAAGTCAGATCAG
CCTTGAACCAGCAAAGCCTAGACATGTTGATCAATTGCGCTGGTGTCCAT
AGTGAGACGCATGGAAAACTAGCGCTAATGTCGGACCTTGAATACCAATT
GTCGGTGAATGTAACTGGAACGCATAACGTTCTTCGCCACTATCTTCCAC
TCATGCAGAACAGCAATGTCAAGAAAATCATCAATATTTCGAGCGCATAT
GGCTCAATGACCAGTGCACGCGCAGTATCATACGCTCCTTGCCCAGCCTA
CAAGATCAGCAAAGCAGCACTGAACGCTTTAACCGTCCAGTATGCGCTGT
CCTACGAAGAGGAAGGATTTATCTTCCTCTCAGTCAGTCCCGGCTGGCTC
CAAAGCGACATGGGTGGTAAGAATGCCGACCTGACCGTGCCACAGGGTGC
TGAAGCAGTCTTGAGCATTTCCCTGTCCGCCGAACGTACGGACAATGGTC
GGTTCAAGAATATCAGCGTCCCAGGGTGGGAGGCTTATGATGGCCAGGAT
GTGCCCTGGTAGATGCAATTGATCACGCATTCTGATGGATGCGTCGTGTT
CGTGGCTTTGGATATTTCTGACGAGTCAAGAATGGCCGAATCGGATGAGG
AAGTCAGATCAGCCTTGAACCAGCAAAGCCTAGACATGTTGATCAATTGC
GCTGGTGTCCATAGTGAGACGCATGGAAAACTAGCGCTAATGTCGGACCT
TGAATACCAATTGTCGGTGAATGTAACTGGAACGCATAACGTTCTTCGCC
ACTATCTTCCACTCATGCAGAACAGCAATGTCAAGAAAATCATCAATATT
TCGAGCGCATATGGCTCAATGACCAGTGCACGCGCAGTATCATACGCTCC
TTGCCCAGCCTACAAGATCAGCAAAGCAGCACTGAACGCTTTAACCGTCC
AGTATGCGCTGTCCTACGAAGAGGAAGGATTTATCTTCCTCTCAGTCAGT
CCCGGCTGGCTCCAAAGCGACATGGGTGGTAAGAATGCCGACCTGACCGT
GCCACAGGGTGCTGAAGCAGTCTTGAGCATTTCCCTGTCCGCCGAACGTA
CGGACAATGGTCGGTTCAAGAATATCAGCGTCCCAGGGTGGGAGGCTTAT
GATGGCCAGGATGTGCCCTGGTAGATGCAATTGATCACGCATTCTGATGG
ATGCGTCGTGTTCGTGGCTTTGGATATTTCTGACGAGTCAAGAATGGCCG
AATCGGATGAGGAAGTCAGATCAGCCTTGAACCAGCAAAGCCTAGACATG
TTGATCAATTGCGCTGGTGTCCATAGTGAGACGCATGGAAAACTAGCGCT
AATGTCGGACCTTGAATACCAATTGTCGGTGAATGTAACTGGAACGCATA
ACGTTCTTCGCCACTATCTTCCACTCATGCAGAACAGCAATGTCAAGAAA
ATCATCAATATTTCGAGCGCATATGGCTCAATGACCAGTGCACGCGCAGT
ATCATACGCTCCTTGCCCAGCCTACAAGATCAGCAAAGCAGCACTGAACG
CTTTAACCGTCCAGTATGCGCTGTCCTACGAAGAGGAAGGATTTATCTTC
CTCTCAGTCAGTCCCGGCTGGCTCCAAAGCGACATGGGTGGTAAGAATGC
CGACCTGACCGTGCCACAGGGTGCTGAAGCAGTCTTGAGCATTTCCCTGT
CCGCCGAACGTACGGACAATGGTCGGTTCAAGAATATCAGCGTCCCAGGG
TGGGAGGCTTATGATGGCCAGGATGTGCCCTGGTAGATGCAATTGATCAC
GCATTCTGATGGATGCGTCGTGTTCGTGGCTTTGGATATTTCTGACGAGT
CAAGAATGGCCGAATCGGATGAGGAAGTCAGATCAGCCTTGAACCAGCAA
AGCCTAGACATGTTGATCAATTGCGCTGGTGTCCATAGTGAGACGCATGG
AAAACTAGCGCTAATGTCGGACCTTGAATACCAATTGTCGGTGAATGTAA
CTGGAACGCATAACGTTCTTCGCCACTATCTTCCACTCATGCAGAACAGC
AATGTCAAGAAAATCATCAATATTTCGAGCGCATATGGCTCAATGACCAG
TGCACGCGCAGTATCATACGCTCCTTGCCCAGCCTACAAGATCAGCAAAG
CAGCACTGAACGCTTTAACCGTCCAGTATGCGCTGTCCTACGAAGAGGAA
GGATTTATCTTCCTCTCAGTCAGTCCCGGCTGGCTCCAAAGCGACATGGG
TGGTAAGAATGCCGACCTGACCGTGCCACAGGGTGCTGAAGCAGTCTTGA
GCATTTCCCTGTCCGCCGAACGTACGGACAATGGTCGGTTCAAGAATATC
AGCGTCCCAGGGTGGGAGGCTTATGATGGCCAGGATGTGCCCTGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002416KJC3_002416Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002416-T1KJC3_002416-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002416-T1.exon1KJC3_002416-T1.exon1Aspergillus niger KJC3exon
KJC3_002416-T1.exon2KJC3_002416-T1.exon2Aspergillus niger KJC3exon
KJC3_002416-T1.exon3KJC3_002416-T1.exon3Aspergillus niger KJC3exon
KJC3_002416-T1.exon4KJC3_002416-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002416-T1.cdsKJC3_002416-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002416-T1.utr3p1KJC3_002416-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2512674..2513491 +
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