|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2516565..2517219+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002418-T1 ID=KJC3_002418-T1|Name=KJC3_002418-T1|organism=Aspergillus niger KJC3|type=mRNA|length=655bp|location=Sequence derived from alignment at ch2:2516565..2517219+ (Aspergillus niger KJC3)
ATGGCTCGGGCATATCGCTATTCTCTTTTGGGTTTAGCTCCACTCTACCT
TGTCCATCGTCCCAAAACTATAGTCAACGAAAATGTTGGAGTTTGCCTTG
ACACAATACTGGCATTCAAGATTCCCGAGTACGTATCTCATACCCTCAGA
CAACTTTGATCTTCACATACAGGCCGGTTAACGATTATACAGCCGCAGCA
AGCACCACCACCTAACAAGAGTGAATAACACATCATCGCCGACAATGCAC
TCAGATAACGACGCAGGATTCACCGTCCACTGCGACAGCCTGAAATGGCT
CCCTCTGGCCCCAAGCGTATTCATCAAAATTGTCAAGCTTGTTCCAGAAA
CCGGAGAATACACGATCATGGTCCGTGCCGAACCCGGTGGACTGCTTCCT
CGCCATCGGCATGTTGAGAGTGCGGAAATTTATGTTCTGAAGGGCAGCGG
TGCCCATCCCCAGACTGGCGCATTTGTTCAGGGGGATTACGTTTCGGAAA
GCAAGGGGGCCGTTCATGATCCCCTTCCCTTTGAACATGAAACGGAGCTT
TTGATGGTTAGCAGAGGGCCTTCGGTGTTTTTGGCGGATGATGGGTCGGA
TTTGTATACAATGGATGTGGCGATGTTGCAGCATATGCTGGAGAGGGCGA
AATAG back to topCoding sequence (CDS) from alignment at ch2:2516565..2517219+ >KJC3_002418-T1 ID=KJC3_002418-T1|Name=KJC3_002418-T1|organism=Aspergillus niger KJC3|type=CDS|length=1182bp|location=Sequence derived from alignment at ch2:2516565..2517219+ (Aspergillus niger KJC3)
ATGGCTCGGGCATATCGCTATTCTCTTTTGGGTTTAGCTCCACTCTACCT
TGTCCATCGTCCCAAAACTATAGTCAACGAAAATGTTGGAGTTTGCCTTG
ACACAATACTGGCATTCAAGATTCCCGACCGCAGCAAGCACCACCACCTA
ACAAGAGTGAATAACACATCATCGCCGACAATGCACTCAGATAACGACGC
AGGATTCACCGTCCACTGCGACAGCCTGAAATGGCTCCCTCTGGCCCCAA
GCGTATTCATCAAAATTGTCAAGCTTGTTCCAGAAACCGGAGAATACACG
ATCATGGTCCGTGCCGAACCCGGTGGACTGCTTCCTCGCCATCGGCATGT
TGAGAGTGCGGAAATTTATGTTCTGAAGGGCAGCGGTGCCCATCCCCAGA
CTGGCGCATTTGTTCAGGGGGATTACGTTTCGGAAAGCAAGGGGGCCGTT
CATGATCCCCTTCCCTTTGAACATGAAACGGAGCTTTTGATGGTTAGCAG
AGGGCCTTCGGTGTTTTTGGCGGATGATGGGTCGGATTTGTATACAATGG
ATGTGGCGATGTTGCAGCATATGCTGGAGAGGGCGAAATAGATGGCTCGG
GCATATCGCTATTCTCTTTTGGGTTTAGCTCCACTCTACCTTGTCCATCG
TCCCAAAACTATAGTCAACGAAAATGTTGGAGTTTGCCTTGACACAATAC
TGGCATTCAAGATTCCCGACCGCAGCAAGCACCACCACCTAACAAGAGTG
AATAACACATCATCGCCGACAATGCACTCAGATAACGACGCAGGATTCAC
CGTCCACTGCGACAGCCTGAAATGGCTCCCTCTGGCCCCAAGCGTATTCA
TCAAAATTGTCAAGCTTGTTCCAGAAACCGGAGAATACACGATCATGGTC
CGTGCCGAACCCGGTGGACTGCTTCCTCGCCATCGGCATGTTGAGAGTGC
GGAAATTTATGTTCTGAAGGGCAGCGGTGCCCATCCCCAGACTGGCGCAT
TTGTTCAGGGGGATTACGTTTCGGAAAGCAAGGGGGCCGTTCATGATCCC
CTTCCCTTTGAACATGAAACGGAGCTTTTGATGGTTAGCAGAGGGCCTTC
GGTGTTTTTGGCGGATGATGGGTCGGATTTGTATACAATGGATGTGGCGA
TGTTGCAGCATATGCTGGAGAGGGCGAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR025979 |
| DBxref | InterPro:IPR014710 |
| DBxref | PFAM:PF12973 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2516565..2517219 + |
|
