You are here

KJC3_002419-T1, KJC3_002419-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002419-T1
Unique NameKJC3_002419-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2518420..2519294-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002419-T1 ID=KJC3_002419-T1|Name=KJC3_002419-T1|organism=Aspergillus niger KJC3|type=mRNA|length=875bp|location=Sequence derived from alignment at ch2:2518420..2519294- (Aspergillus niger KJC3)
ATGCCATCTTCCCCTCCTCCTGGAACTCTCGCCCTCGATGGTCGGGACCT CGTCTTGCAGCCACTCCCGGACCTCCAGGTCGGCCCCGGAAGCACCAGAA GTGGTGCTATCCATGACATACACTATAAGGGACAATTGGCACCCTGGCCA AATTTTATAAATGAGGTTGAAAATGCCTTCCGCCTCTTCCCATGGGCAAC TTCGGTTGTCGATGTTCAGGAACCCTTGCCAGCACACCCCCATAGCCTGT CCTATGAGCAGGTATACATTGGTGACGAGCACGCAGTTCAAGGTAGGTTT TCCCAGCTCATAGGACAGGCTATGGGGGGTATCTTTGCATCACAAGGCAT GGACATTCGCTTCGGGGACTTTAAGTCCTGTACTGTGGAAAAGCAGTATA AAAAGGTACCGGATGTCATGATGCGCGATGCAGCAGGGGCACCGCTCGCA GTCGGGGAGGAAAAGACCCCCTGGGCAAAACCACACGACATCCGTCTGGC AATGGGAAGGGAGTGTATATTGCGGCATCTCTTCGGTGAATGGTCGTTAC TTCTACGGATAGGTACTGTATAGCTGACAGGATTGTAGGGCAGCCGGCGA TGTACATGAGAGACTTGGATTTGCAGTTTGGTTTCCTCAGCACATACGAG CAGACTGTCTTTTTTCGTCAAGATGATACGGTTGGAAACAACCAGACCGT TCTCCTTTACTCACCCGTTATCATGCATAACTGGGGATACATTCCAGGCC AGACTGTGACGCTCAAACAAGCGTTGTTTTACCTGGGCCTGCAGGCGTCA GCAGCCCCCTACTTCATAACTTCTGAGTCGAGAACGACCGGCTGGGTCAC CAATAAAGATGGGGATAAGCTCTAG
back to top

Coding sequence (CDS) from alignment at ch2:2518420..2519294-

>KJC3_002419-T1 ID=KJC3_002419-T1|Name=KJC3_002419-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch2:2518420..2519294- (Aspergillus niger KJC3)
GGCAGCCGGCGATGTACATGAGAGACTTGGATTTGCAGTTTGGTTTCCTC
AGCACATACGAGCAGACTGTCTTTTTTCGTCAAGATGATACGGTTGGAAA
CAACCAGACCGTTCTCCTTTACTCACCCGTTATCATGCATAACTGGGGAT
ACATTCCAGGCCAGACTGTGACGCTCAAACAAGCGTTGTTTTACCTGGGC
CTGCAGGCGTCAGCAGCCCCCTACTTCATAACTTCTGAGTCGAGAACGAC
CGGCTGGGTCACCAATAAAGATGGGGATAAGCTCTAGATGCCATCTTCCC
CTCCTCCTGGAACTCTCGCCCTCGATGGTCGGGACCTCGTCTTGCAGCCA
CTCCCGGACCTCCAGGTCGGCCCCGGAAGCACCAGAAGTGGTGCTATCCA
TGACATACACTATAAGGGACAATTGGCACCCTGGCCAAATTTTATAAATG
AGGTTGAAAATGCCTTCCGCCTCTTCCCATGGGCAACTTCGGTTGTCGAT
GTTCAGGAACCCTTGCCAGCACACCCCCATAGCCTGTCCTATGAGCAGGT
ATACATTGGTGACGAGCACGCAGTTCAAGGTAGGTTTTCCCAGCTCATAG
GACAGGCTATGGGGGGTATCTTTGCATCACAAGGCATGGACATTCGCTTC
GGGGACTTTAAGTCCTGTACTGTGGAAAAGCAGTATAAAAAGGTACCGGA
TGTCATGATGCGCGATGCAGCAGGGGCACCGCTCGCAGTCGGGGAGGAAA
AGACCCCCTGGGCAAAACCACACGACATCCGTCTGGCAATGGGAAGGGAG
TGGCAGCCGGCGATGTACATGAGAGACTTGGATTTGCAGTTTGGTTTCCT
CAGCACATACGAGCAGACTGTCTTTTTTCGTCAAGATGATACGGTTGGAA
ACAACCAGACCGTTCTCCTTTACTCACCCGTTATCATGCATAACTGGGGA
TACATTCCAGGCCAGACTGTGACGCTCAAACAAGCGTTGTTTTACCTGGG
CCTGCAGGCGTCAGCAGCCCCCTACTTCATAACTTCTGAGTCGAGAACGA
CCGGCTGGGTCACCAATAAAGATGGGGATAAGCTCTAGATGCCATCTTCC
CCTCCTCCTGGAACTCTCGCCCTCGATGGTCGGGACCTCGTCTTGCAGCC
ACTCCCGGACCTCCAGGTCGGCCCCGGAAGCACCAGAAGTGGTGCTATCC
ATGACATACACTATAAGGGACAATTGGCACCCTGGCCAAATTTTATAAAT
GAGGTTGAAAATGCCTTCCGCCTCTTCCCATGGGCAACTTCGGTTGTCGA
TGTTCAGGAACCCTTGCCAGCACACCCCCATAGCCTGTCCTATGAGCAGG
TATACATTGGTGACGAGCACGCAGTTCAAGGTAGGTTTTCCCAGCTCATA
GGACAGGCTATGGGGGGTATCTTTGCATCACAAGGCATGGACATTCGCTT
CGGGGACTTTAAGTCCTGTACTGTGGAAAAGCAGTATAAAAAGGTACCGG
ATGTCATGATGCGCGATGCAGCAGGGGCACCGCTCGCAGTCGGGGAGGAA
AAGACCCCCTGGGCAAAACCACACGACATCCGTCTGGCAATGGGAAGGGA
GT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002419KJC3_002419Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002419-T1KJC3_002419-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002419-T1.cdsKJC3_002419-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002419-T1.exon2KJC3_002419-T1.exon2Aspergillus niger KJC3exon
KJC3_002419-T1.exon1KJC3_002419-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2518420..2519294 -