You are here

Home

KJC3_002435-T1, KJC3_002435-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002435-T1
Unique NameKJC3_002435-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2555720..2558329+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002435-T1 ID=KJC3_002435-T1|Name=KJC3_002435-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2610bp|location=Sequence derived from alignment at ch2:2555720..2558329+ (Aspergillus niger KJC3)
CCCATCTTCACTACTCCATTGTAGTTCAACTGTCCCCTTTGCAATCTCAC
GTTGTCTTTAATTCCCTAACACTTGTCATGCCTGACTCTTACGATTACAT
CATTGTCGGTGGAGGTCTGACGGGCTGTGCTTTGGCTGGTCGGCTGGCTG
AGAAAGACAAGTCATTACAGATGTTGATCATTGAAGCCGGACCCAACGTC
GTCGATAATCCTCTCACCAGTACCCCATTGGCATGCTTTGGTGCTCATCA
CTCGCCTTTGGATTGGGACTATACCACGGTGCCACAAAAGCATCTCAACA
ATCGTGAATGCTACAACGCGGCAGGGAAGGCTCTGGGTGGAGGCACAGCG
ATAAACTACGGCACCTGGACCCGTGGTAACGCTGCCGACTACAATCTCTG
GGCAAAGCTGGTCGGGGACTCTAGCTGGAGCTACGAGGGTCTACTTCCTT
ACTTCAAGCGCGTCGAGACGCATTACGATCCTAATGTCGACACGGCAATT
CACGGCACCAGCGGCCCCATAACCAACACAATTGTCGCACTCACCAGCCC
GGACCGGAAATATCCTCTGAAAGAGCCAGTCCGCTCTGCATGGGAACGTA
TTGGCGTCAAGTTCAACCCAGATGCAAACGCTGGAAGCCCGCTAGGTCTA
GCTCACTTTGGGGAGAACTGGCGTGAAGGACAGCGTCAGCTTGCCAGTGA
GGCATATGGATTGTCTCGGCGTCAAGGAATATCCATTGTCACTGATACAC
TGGCGGCAAAGGTAATTTTCCAGGAGCAAGATGGTCAACAGGTCGCGGCA
GGAGTCCAATTGGTCGATGGAGAAGAATACCATGCCAGAAGAGAGGTGAT
CATTTCTGCTGGAACATACCGTACCCCTCAGCTTCTCATGCTCTCGGGAA
TTGGGCCCGCAGAAGAGCTGGCAAAACACAGCATCCCACAACTTGTGAAC
TCTCCAGAAGTGGGTCGAAACTTCCATGATCACATGTGTTTCCCCCAATG
GTGGAAACTGCGTCACCCCGAACAAGGTCTCTCTATGGGGACGCCCCTTT
GGAACAGTCCCGCATATGGCATGGGGGTACCTTATGACTGGAACGTGACG
CTGCAGACGCCTGCAGAGGAATTGATCAAAGCATTTCAAGCAGACGACGG
GCAAATCCCGCCTAATGATCATCCATATCTTGACACGGGCTTTGCGCACT
CTGAGGTTCTGGTTATCTACGCACCGATGAGTCGCGCTGTGACTGGCTTT
GAAACAGCCATGGATGGTACACACATAAGCACGGCGGTTCTTTTGATGGC
TCCGACAGCACGAGGCCAGATCACTCTGGCCGATGCAGATCCGGCCAGTG
CACCTCTCATTGATCCCAACTACTGTTCCAAGGAAGTGGACCGAGCCATT
CTACGAGACGGGATTCGGAGAGTTGCCAAGCTCATCCTGGACACGCCGGA
GGGTCAAGACATGGTGGAGCACGAAGTGACCAGACCCGGCAATGAACCTA
TGAGACTCGATTCCACTGACGAGGAAATCGACAACAACATCAGAAATGGT
GCAATTACATTCTTCCATCCAGGTGGCTCGGCATCCATGGGCAAGGTAGT
GGATACTCAACTGCGGGTGAAGGGCGTGAAGGGATTGCGTGTTGCGGATG
CTAGTGTCCTGCCTGTACCTCTTGCGGCGCATTATCAGGCTGTCCTTTAT
GCAGTGGCGGAGAAGGCAGCGGATCTACTCTTATACTAGCATGTAGGGTG
ATTAAGATCACTAGATCCAGATTTTAACCAAAGAATATTTGTTTCCCAGT
GACTTATCTTGAAATCGGATTGTAGTTCACTGCAAATTGTAAAAATTCTG
AGTATTGGCAAATAGACCTTCAAGGTAGTAGCTGCGACATAGCGACCCTT
TTACATCACTTCACGTACAGATCGTTGCAATTTAGTCAGACTCACGGTGT
ACTTGGTTGCATTCCTCGCAGCTGACAAAAAACTTCCATCTACGACCTTC
AGGGGCCTAAATCGTCCGGAACACATGACCATTCACGATTGGGGAGATCC
CGAGATATCGAAGGTCAGCCTCAATGATGAAGGGACTAGACTCAACTGCA
CGACAGTGCTACTTAATATTCGCCTGTTAGCAAAGTAATGCTGTGCGGCA
GCTTTCATTCTAGAAACGATGAACAGGCAAACTTATGATGGTAATAGAAT
CAAACCGAAGCAGACATCTCGGGAATTTATATCACCACATATTTCCAACC
CAGCGCCAGGATTGCAAAACAAGCCATGTGCCGAGAATCCCAAAGGCAAT
ACCAAATGAATTCCCGCAGCCCCTGGAAAGGAAGGAAATAGAAGCTGATT
ACGGGGATTCTATGGATTGTTGAGAAAGCGGTTGACTAACTTCCATGTGG
CTCCCTGACAAATAAAACAGTGGAAGTAAGCTTCAGAATACTGTAATGAG
AGTGGGAGGGGACCGGCATATCCTCTTATTGGAGCTTCTTGGTTGCCGGT
TCGGAAAGCCGGAAATGGATTTAGAATCATGTCGGGAGTAGCGCTTTGAA
ATCGGCTTGCCGTTGACATACACAGACACGCCCCCATTTCGGCCCGCAAC
ATGTCCGAGG
back to top

Coding sequence (CDS) from alignment at ch2:2555720..2558329+

>KJC3_002435-T1 ID=KJC3_002435-T1|Name=KJC3_002435-T1|organism=Aspergillus niger KJC3|type=CDS|length=1662bp|location=Sequence derived from alignment at ch2:2555720..2558329+ (Aspergillus niger KJC3)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAGATGTTGA
TCATTGAAGCCGGACCCAACGTCGTCGATAATCCTCTCACCAGTACCCCA
TTGGCATGCTTTGGTGCTCATCACTCGCCTTTGGATTGGGACTATACCAC
GGTGCCACAAAAGCATCTCAACAATCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGACTCTAGCTG
GAGCTACGAGGGTCTACTTCCTTACTTCAAGCGCGTCGAGACGCATTACG
ATCCTAATGTCGACACGGCAATTCACGGCACCAGCGGCCCCATAACCAAC
ACAATTGTCGCACTCACCAGCCCGGACCGGAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTAGGTCTAGCTCACTTTGGGGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAGGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGCGGCAAAGGTAATTTTCCAGGAGC
AAGATGGTCAACAGGTCGCGGCAGGAGTCCAATTGGTCGATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTTCTCATGCTCTCGGGAATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGAAACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGAACAGTCCCGCATATGGCATGGGGG
TACCTTATGACTGGAACGTGACGCTGCAGACGCCTGCAGAGGAATTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCTAATGATCATCCATA
TCTTGACACGGGCTTTGCGCACTCTGAGGTTCTGGTTATCTACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATGCAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002435KJC3_002435Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002435-T1.utr5p1KJC3_002435-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002435-T1.exon1KJC3_002435-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002435-T1.cdsKJC3_002435-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002435-T1.utr3p1KJC3_002435-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002435-T1KJC3_002435-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.10
NoteCAZy:AA3_3
NoteCAZy:AA3
NoteCAZy:AA3_2
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR012132
DBxrefInterPro:IPR000172
DBxrefInterPro:IPR007867
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2555720..2558329 +
Powered by Drupal