|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2602579..2604963- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002450-T1 ID=KJC3_002450-T1|Name=KJC3_002450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2385bp|location=Sequence derived from alignment at ch2:2602579..2604963- (Aspergillus niger KJC3)
CTTGACCTCTCCCATCATGTACTGATGTTTATCTCTGTTTCTCATCCATC
CAGGCCATATCTAGTACTGTCATCCCACGTTTTATCCACGCCACACTTTC
CTGACCGATCTAACCCTCATCTTACGAGAAGCCTACCATCTGAACTAGCC
GCCCCGGGAGAAATTTGTGAGAACCTCACCATGTTCTATGCGGTCTGATA
CGCACAACTGCCACCGTGACACGTGTAAAAAGTGGTCTCAGTTGCGAACA
TGACGTCGTCCACCACCCCTTCAACTCTATCCCATAGCAGGGCTATCCCA
TTCGCGAGCCGGCTCAGCGAACAACTGTCGCAGCGGACCGGACAAACCAG
TTCAGGCACCGATCCCGACCATGCCGGTGACAAGAACACACCTACACTTG
GGCCTCCATTACGCCCTTCACCGAATACTCGCTCGCTGAGCGATGCGGGA
AAACCAGTTTCCGCCATGCCGATCAATCACGATGAATTCCGCCCGCCCAG
CAAAGATGACTCCTCCCTCTCCTCGACCCCCGAAACGCCCCAGCGGCCGT
CCATGCAGAGTCTCTCGTTGAACCTCTCTGCCAGATCTTCCGGACCGTTA
TCCTTATCCAATCGTGCCCCGCTTTCCCCGAAGCTAGACTCCTCGGCCAT
CTACGGCTCGCCGGGCTCCGTGCTGCCCCGTCGTTCCCGTGGCCTGGACT
TTTCACGAGCTTGCACCAATCTCCATCACTCGACCCTTGCAGAAGCGTCC
CCGGACTCCTCCCCGACCGTTGGCGGGCGCGGTGTAAATATCCCGCAGCG
GCGTGGCTCGCCAGCTTCAGTATCCGGCCTCCAGTTCTCCACCTCGAACC
CCGCCGACAAGGCCACAATTTCGAGCTCCGTATCCAGCGTCAACATGATG
GAATCTGATACAAGCAGCAGTGAGGAGGATGACGAACCCATGATTGGCGA
CCGCGACGACATGATGATCACCAATACACCCCAGGCGAAGCGGTTGGGAG
GTGGGATGAGTCCATTTGCTGTGGGGAACGTGTCTAGCCCGGGAAACGAG
TGGATGGGCGGCTACTCACAAGCAGCCGCGAGTTTGATGAGCTTCCAACG
GGCTCGTTTCCGCAAGGGACGAAGCAGGCACAGCTCCAGCAGTGCTAGCG
GCAGCTCCAAGCAGAGTCCGGGCCCTCTTTCGCCACCCGTGATGAAGAGT
ATCGAAGGACAGAATGGAGGATACTTTGGCGCAGGTCCCCGACGGGCCAG
TCTCAGCTTGGGTACGCGGGATTTGCGCCTGTCGGATGTCAGCGACGAGG
GTGAGAACCGCACTGCGCGTGGGCAGAGCCCAAGCACATCGAACTCCGAG
GGCGGGCCTTTGGGGGTAATACGACGGGCCGTTACCCGTCGTGGGAGCTT
ACTGGTAAGTACTCTAGTCCGAATGGATAGAACACAGCTAACTCCGTTTA
GCCAAAAACAAAGACCTTTGCGCGTATCCGGGCGGCATTGATGGAGGAGT
CTGCCCCGATCGATAGCGAGGCCAAGCGAGAAGCGGAAGTAATTCGACAA
GTAAAAGAGAACGAACCCGACGTTGAAGCGAAATCACCATTAGGTGATCT
GTCGGCTCTTGATACATCCACCCCTGTTGGTCACGGGCAAACCCCAGAGG
AGATCCCTCCAAAAGCCGGACTAACGACGCCGGACGAACCAAGATTCATC
GACCAGGCCAATAGAAATTCGGGAGGGGTCGAATTCTGGAATTCGTTCGA
CGAGCGCTACCGCACGCCGCCCCCGCCCCAACGCCGGCATGGAGCCTCGT
CTGTTTCGGAAGATGACCTTGCTATGGATATCACACCATCTACCACAGTA
GGGTCGACTACAGAGTTTGCTAAGCCTAGCGAGCGACCTGGCTCGCGAAG
TGAAGCATCCCAGGGTGCTCCGGCTGGGTTTGTGGGTGAGTTTAGGAGGA
AACGCCGTCGGGATGATGATTTCGATCCGAACCTCTTCAAGCGGCGAGCG
GTATCCCCGAGCATGAGCGCACAGAGCAGTCCGGTCATGCCTAATTCACC
AGTGGTCAAAGACACGAGTCCCAGCATTTGGGGGCCACCGAGGTCCAATC
TTGGCTCGCTGTTCCCAGACCGGCCTGCCACCGACAATGGGCCTCGCAAT
GGCAACAACCATACCGGAACCCTGAAGCGAGTGGGGCTGCAGGGAATGAA
TGAAACCAGTGATGGGTTCATGAATATGAGCATTGAGTAGGCTGGCTGAG
CCGGTTTACATTATAAAATTACAGCATTCTCCGACATCGACTATGGATTC
AATGCTATTAGCGGGTTCGGTTGAGTTCGGCGTTATTTTTGCATTGATTG
GTACTATACTTGTGGGACATAGCTTAACTGCATCG back to topCoding sequence (CDS) from alignment at ch2:2602579..2604963- >KJC3_002450-T1 ID=KJC3_002450-T1|Name=KJC3_002450-T1|organism=Aspergillus niger KJC3|type=CDS|length=3888bp|location=Sequence derived from alignment at ch2:2602579..2604963- (Aspergillus niger KJC3)
CCAAAAACAAAGACCTTTGCGCGTATCCGGGCGGCATTGATGGAGGAGTC
TGCCCCGATCGATAGCGAGGCCAAGCGAGAAGCGGAAGTAATTCGACAAG
TAAAAGAGAACGAACCCGACGTTGAAGCGAAATCACCATTAGGTGATCTG
TCGGCTCTTGATACATCCACCCCTGTTGGTCACGGGCAAACCCCAGAGGA
GATCCCTCCAAAAGCCGGACTAACGACGCCGGACGAACCAAGATTCATCG
ACCAGGCCAATAGAAATTCGGGAGGGGTCGAATTCTGGAATTCGTTCGAC
GAGCGCTACCGCACGCCGCCCCCGCCCCAACGCCGGCATGGAGCCTCGTC
TGTTTCGGAAGATGACCTTGCTATGGATATCACACCATCTACCACAGTAG
GGTCGACTACAGAGTTTGCTAAGCCTAGCGAGCGACCTGGCTCGCGAAGT
GAAGCATCCCAGGGTGCTCCGGCTGGGTTTGTGGGTGAGTTTAGGAGGAA
ACGCCGTCGGGATGATGATTTCGATCCGAACCTCTTCAAGCGGCGAGCGG
TATCCCCGAGCATGAGCGCACAGAGCAGTCCGGTCATGCCTAATTCACCA
GTGGTCAAAGACACGAGTCCCAGCATTTGGGGGCCACCGAGGTCCAATCT
TGGCTCGCTGTTCCCAGACCGGCCTGCCACCGACAATGGGCCTCGCAATG
GCAACAACCATACCGGAACCCTGAAGCGAGTGGGGCTGCAGGGAATGAAT
GAAACCAGTGATGGGTTCATGAATATGAGCATTGAGTAGATGACGTCGTC
CACCACCCCTTCAACTCTATCCCATAGCAGGGCTATCCCATTCGCGAGCC
GGCTCAGCGAACAACTGTCGCAGCGGACCGGACAAACCAGTTCAGGCACC
GATCCCGACCATGCCGGTGACAAGAACACACCTACACTTGGGCCTCCATT
ACGCCCTTCACCGAATACTCGCTCGCTGAGCGATGCGGGAAAACCAGTTT
CCGCCATGCCGATCAATCACGATGAATTCCGCCCGCCCAGCAAAGATGAC
TCCTCCCTCTCCTCGACCCCCGAAACGCCCCAGCGGCCGTCCATGCAGAG
TCTCTCGTTGAACCTCTCTGCCAGATCTTCCGGACCGTTATCCTTATCCA
ATCGTGCCCCGCTTTCCCCGAAGCTAGACTCCTCGGCCATCTACGGCTCG
CCGGGCTCCGTGCTGCCCCGTCGTTCCCGTGGCCTGGACTTTTCACGAGC
TTGCACCAATCTCCATCACTCGACCCTTGCAGAAGCGTCCCCGGACTCCT
CCCCGACCGTTGGCGGGCGCGGTGTAAATATCCCGCAGCGGCGTGGCTCG
CCAGCTTCAGTATCCGGCCTCCAGTTCTCCACCTCGAACCCCGCCGACAA
GGCCACAATTTCGAGCTCCGTATCCAGCGTCAACATGATGGAATCTGATA
CAAGCAGCAGTGAGGAGGATGACGAACCCATGATTGGCGACCGCGACGAC
ATGATGATCACCAATACACCCCAGGCGAAGCGGTTGGGAGGTGGGATGAG
TCCATTTGCTGTGGGGAACGTGTCTAGCCCGGGAAACGAGTGGATGGGCG
GCTACTCACAAGCAGCCGCGAGTTTGATGAGCTTCCAACGGGCTCGTTTC
CGCAAGGGACGAAGCAGGCACAGCTCCAGCAGTGCTAGCGGCAGCTCCAA
GCAGAGTCCGGGCCCTCTTTCGCCACCCGTGATGAAGAGTATCGAAGGAC
AGAATGGAGGATACTTTGGCGCAGGTCCCCGACGGGCCAGTCTCAGCTTG
GGTACGCGGGATTTGCGCCTGTCGGATGTCAGCGACGAGGGTGAGAACCG
CACTGCGCGTGGGCAGAGCCCAAGCACATCGAACTCCGAGGGCGGGCCTT
TGGGGGTAATACGACGGGCCGTTACCCGTCGTGGGAGCTTACTGCCAAAA
ACAAAGACCTTTGCGCGTATCCGGGCGGCATTGATGGAGGAGTCTGCCCC
GATCGATAGCGAGGCCAAGCGAGAAGCGGAAGTAATTCGACAAGTAAAAG
AGAACGAACCCGACGTTGAAGCGAAATCACCATTAGGTGATCTGTCGGCT
CTTGATACATCCACCCCTGTTGGTCACGGGCAAACCCCAGAGGAGATCCC
TCCAAAAGCCGGACTAACGACGCCGGACGAACCAAGATTCATCGACCAGG
CCAATAGAAATTCGGGAGGGGTCGAATTCTGGAATTCGTTCGACGAGCGC
TACCGCACGCCGCCCCCGCCCCAACGCCGGCATGGAGCCTCGTCTGTTTC
GGAAGATGACCTTGCTATGGATATCACACCATCTACCACAGTAGGGTCGA
CTACAGAGTTTGCTAAGCCTAGCGAGCGACCTGGCTCGCGAAGTGAAGCA
TCCCAGGGTGCTCCGGCTGGGTTTGTGGGTGAGTTTAGGAGGAAACGCCG
TCGGGATGATGATTTCGATCCGAACCTCTTCAAGCGGCGAGCGGTATCCC
CGAGCATGAGCGCACAGAGCAGTCCGGTCATGCCTAATTCACCAGTGGTC
AAAGACACGAGTCCCAGCATTTGGGGGCCACCGAGGTCCAATCTTGGCTC
GCTGTTCCCAGACCGGCCTGCCACCGACAATGGGCCTCGCAATGGCAACA
ACCATACCGGAACCCTGAAGCGAGTGGGGCTGCAGGGAATGAATGAAACC
AGTGATGGGTTCATGAATATGAGCATTGAGTAGATGACGTCGTCCACCAC
CCCTTCAACTCTATCCCATAGCAGGGCTATCCCATTCGCGAGCCGGCTCA
GCGAACAACTGTCGCAGCGGACCGGACAAACCAGTTCAGGCACCGATCCC
GACCATGCCGGTGACAAGAACACACCTACACTTGGGCCTCCATTACGCCC
TTCACCGAATACTCGCTCGCTGAGCGATGCGGGAAAACCAGTTTCCGCCA
TGCCGATCAATCACGATGAATTCCGCCCGCCCAGCAAAGATGACTCCTCC
CTCTCCTCGACCCCCGAAACGCCCCAGCGGCCGTCCATGCAGAGTCTCTC
GTTGAACCTCTCTGCCAGATCTTCCGGACCGTTATCCTTATCCAATCGTG
CCCCGCTTTCCCCGAAGCTAGACTCCTCGGCCATCTACGGCTCGCCGGGC
TCCGTGCTGCCCCGTCGTTCCCGTGGCCTGGACTTTTCACGAGCTTGCAC
CAATCTCCATCACTCGACCCTTGCAGAAGCGTCCCCGGACTCCTCCCCGA
CCGTTGGCGGGCGCGGTGTAAATATCCCGCAGCGGCGTGGCTCGCCAGCT
TCAGTATCCGGCCTCCAGTTCTCCACCTCGAACCCCGCCGACAAGGCCAC
AATTTCGAGCTCCGTATCCAGCGTCAACATGATGGAATCTGATACAAGCA
GCAGTGAGGAGGATGACGAACCCATGATTGGCGACCGCGACGACATGATG
ATCACCAATACACCCCAGGCGAAGCGGTTGGGAGGTGGGATGAGTCCATT
TGCTGTGGGGAACGTGTCTAGCCCGGGAAACGAGTGGATGGGCGGCTACT
CACAAGCAGCCGCGAGTTTGATGAGCTTCCAACGGGCTCGTTTCCGCAAG
GGACGAAGCAGGCACAGCTCCAGCAGTGCTAGCGGCAGCTCCAAGCAGAG
TCCGGGCCCTCTTTCGCCACCCGTGATGAAGAGTATCGAAGGACAGAATG
GAGGATACTTTGGCGCAGGTCCCCGACGGGCCAGTCTCAGCTTGGGTACG
CGGGATTTGCGCCTGTCGGATGTCAGCGACGAGGGTGAGAACCGCACTGC
GCGTGGGCAGAGCCCAAGCACATCGAACTCCGAGGGCGGGCCTTTGGGGG
TAATACGACGGGCCGTTACCCGTCGTGGGAGCTTACTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002450-T1.utr3p1 | KJC3_002450-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002450-T1.utr5p1 | KJC3_002450-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.11 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2602579..2604963 - |
|
