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KJC3_002466-T1, KJC3_002466-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002466-T1
Unique NameKJC3_002466-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2636737..2637930-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002466-T1 ID=KJC3_002466-T1|Name=KJC3_002466-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1194bp|location=Sequence derived from alignment at ch2:2636737..2637930- (Aspergillus niger KJC3)
CCAGCCAAACGGCGAATCCCTTCTGGCTTCTCATGAGCGCAGTAAATTAT
AACTAAGCGCTACAAAATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAA
GCCCCCGCTCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTAT
CAGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGG
GGCTTGGATACTGGTACGTCTTCAGACCTGCCTCTCGATTGGCTCATACA
CTAATTAGAATATTTCATGTAGATTCAGATATTTGCGACCCCCTTTCATC
GCATGTTCTCCCTCGACAATAGAAGTATCCAGTATCCCTTCGCTGTCGTG
GAGAGAGTTCCCGTTGGTGAGATGCTGCAACCTGCCCCGTCACCGTCGAC
TTTCCTTGTTGCTTACTTTCGATTCATAGTTTGGTCTATCATCTATGCTG
GGGTCATTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCCATGTTCCGTCCA
TACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTTAT
GCTAACGAGCCTTATCACCGATATCATAAAGAACGCCGCTGGGCGACCTC
GCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCCAAGGAT
TTGTTGGTTTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTACA
AGAGGGATGGAGGAGTTTTCCCAGCGGCCACAGTAGCTTCTCATTTGGTG
GACTCGGTTATATGTCATTGTAAGCTTCAATGCCGCGAGAGCTCAGAGAA
AGCACGCTGATTTTTTTCCAGATTCCTCTCCGGTCAAATGCACGTCTTCA
GACCGAGGACCGACCTCTGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTC
GGCGCTCTGTTAATTGCCATTTCTCGTCTGGACGACTACCGCCACGATGT
GTACGATGTTACTTGTGGATCGCTGCTTGGGTTGACGGTAGCTTATTTCT
CGTACCGACGATATTATCCGGCCCTTCGGTCAATCAAGTGCGACTGCCCC
TATGGCAGAGACGATATCATCGGCCCAGATGGATTCTCCAAACTGCCTGG
TGATGAGGAACAGCAACTGCCGGGCTCAGCATCTGTTGCGCGTCAATGGG
ATGCTCGGGAATCCTATCAACTTGCGGAGTCTGCATCCTCTTAA
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Coding sequence (CDS) from alignment at ch2:2636737..2637930-

>KJC3_002466-T1 ID=KJC3_002466-T1|Name=KJC3_002466-T1|organism=Aspergillus niger KJC3|type=CDS|length=3816bp|location=Sequence derived from alignment at ch2:2636737..2637930- (Aspergillus niger KJC3)
ATTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGACCGACCTCTGTC
GCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATTGCCATT
TCTCGTCTGGACGACTACCGCCACGATGTGTACGATGTTACTTGTGGATC
GCTGCTTGGGTTGACGGTAGCTTATTTCTCGTACCGACGATATTATCCGG
CCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGATATCATC
GGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAACTGCC
GGGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGGAATCCTATCAAC
TTGCGGAGTCTGCATCCTCTTAATTTGGTCTATCATCTATGCTGGGGTCA
TTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCCATGTTCCGTCCATACCCT
CACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTTATGCTAAC
GAGCCTTATCACCGATATCATAAAGAACGCCGCTGGGCGACCTCGCCCTG
ATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCCAAGGATTTGTTG
GTTTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTACAAGAGGG
ATGGAGGAGTTTTCCCAGCGGCCACAGTAGCTTCTCATTTGGTGGACTCG
GTTATATGTCATTATTCAGATATTTGCGACCCCCTTTCATCGCATGTTCT
CCCTCGACAATAGAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAGAGTT
CCCGTTGATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCCCGCT
CTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGCGCTCG
TACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTTGGAT
ACTGATTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGACCGACCTC
TGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAATTGC
CATTTCTCGTCTGGACGACTACCGCCACGATGTGTACGATGTTACTTGTG
GATCGCTGCTTGGGTTGACGGTAGCTTATTTCTCGTACCGACGATATTAT
CCGGCCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACGATAT
CATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAGCAAC
TGCCGGGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGGAATCCTAT
CAACTTGCGGAGTCTGCATCCTCTTAATTTGGTCTATCATCTATGCTGGG
GTCATTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCCATGTTCCGTCCATA
CCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTTATGC
TAACGAGCCTTATCACCGATATCATAAAGAACGCCGCTGGGCGACCTCGC
CCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCCAAGGATTT
GTTGGTTTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTACAAG
AGGGATGGAGGAGTTTTCCCAGCGGCCACAGTAGCTTCTCATTTGGTGGA
CTCGGTTATATGTCATTATTCAGATATTTGCGACCCCCTTTCATCGCATG
TTCTCCCTCGACAATAGAAGTATCCAGTATCCCTTCGCTGTCGTGGAGAG
AGTTCCCGTTGATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAGCCCC
CGCTCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATCAGCG
CTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGGGCTT
GGATACTGATTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGACCGA
CCTCTGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTGTTAA
TTGCCATTTCTCGTCTGGACGACTACCGCCACGATGTGTACGATGTTACT
TGTGGATCGCTGCTTGGGTTGACGGTAGCTTATTTCTCGTACCGACGATA
TTATCCGGCCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGAGACG
ATATCATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGAACAG
CAACTGCCGGGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGGAATC
CTATCAACTTGCGGAGTCTGCATCCTCTTAATTTGGTCTATCATCTATGC
TGGGGTCATTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCCATGTTCCGTC
CATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGCGCTT
ATGCTAACGAGCCTTATCACCGATATCATAAAGAACGCCGCTGGGCGACC
TCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCCAAGG
ATTTGTTGGTTTCATGGACGGTGTGCACTCAAACCAACGAGCACATCCTA
CAAGAGGGATGGAGGAGTTTTCCCAGCGGCCACAGTAGCTTCTCATTTGG
TGGACTCGGTTATATGTCATTATTCAGATATTTGCGACCCCCTTTCATCG
CATGTTCTCCCTCGACAATAGAAGTATCCAGTATCCCTTCGCTGTCGTGG
AGAGAGTTCCCGTTGATGCCTCGCAGTGGACTTGCTGCTGGCTCAGCAAG
CCCCCGCTCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTGTATC
AGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGTAGGG
GCTTGGATACTGATTCCTCTCCGGTCAAATGCACGTCTTCAGACCGAGGA
CCGACCTCTGTCGCTGCCTTGTGGCTTTTGTTCCGCTCCTCGGCGCTCTG
TTAATTGCCATTTCTCGTCTGGACGACTACCGCCACGATGTGTACGATGT
TACTTGTGGATCGCTGCTTGGGTTGACGGTAGCTTATTTCTCGTACCGAC
GATATTATCCGGCCCTTCGGTCAATCAAGTGCGACTGCCCCTATGGCAGA
GACGATATCATCGGCCCAGATGGATTCTCCAAACTGCCTGGTGATGAGGA
ACAGCAACTGCCGGGCTCAGCATCTGTTGCGCGTCAATGGGATGCTCGGG
AATCCTATCAACTTGCGGAGTCTGCATCCTCTTAATTTGGTCTATCATCT
ATGCTGGGGTCATTCCGTTCCTCGTCCTCCTCGCCTGGGCAGCCATGTTC
CGTCCATACCCTCACAAGGTCCAAGTGACCTTGCTGGGCTTCCTCATCGC
GCTTATGCTAACGAGCCTTATCACCGATATCATAAAGAACGCCGCTGGGC
GACCTCGCCCTGATTTGATTTCTCGCTGTTTACCAAGGAAGGGTACCCCC
AAGGATTTGTTGGTTTCATGGACGGTGTGCACTCAAACCAACGAGCACAT
CCTACAAGAGGGATGGAGGAGTTTTCCCAGCGGCCACAGTAGCTTCTCAT
TTGGTGGACTCGGTTATATGTCATTATTCAGATATTTGCGACCCCCTTTC
ATCGCATGTTCTCCCTCGACAATAGAAGTATCCAGTATCCCTTCGCTGTC
GTGGAGAGAGTTCCCGTTGATGCCTCGCAGTGGACTTGCTGCTGGCTCAG
CAAGCCCCCGCTCTCCAGTGAGAGAAGCAACTGGCACAATGTCCCGCTTG
TATCAGCGCTCGTACCCGGTCGTCGACGCTGTCGCGCTGGCGTGCATTGT
AGGGGCTTGGATACTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002466KJC3_002466Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002466-T1KJC3_002466-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002466-T1.cdsKJC3_002466-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002466-T1.exon4KJC3_002466-T1.exon4Aspergillus niger KJC3exon
KJC3_002466-T1.exon3KJC3_002466-T1.exon3Aspergillus niger KJC3exon
KJC3_002466-T1.exon2KJC3_002466-T1.exon2Aspergillus niger KJC3exon
KJC3_002466-T1.exon1KJC3_002466-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002466-T1.utr5p1KJC3_002466-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036938
DBxrefInterPro:IPR000326
DBxrefPFAM:PF01569
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2636737..2637930 -
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