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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2648402..2651665+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002471-T1 ID=KJC3_002471-T1|Name=KJC3_002471-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3264bp|location=Sequence derived from alignment at ch2:2648402..2651665+ (Aspergillus niger KJC3)
AGCATCTTGGTAAAGGAGTGCTCTCAGACGCGACCCATAAGAATCAATGA
TGGATTAAGCTATAATTGAACCGCCAAAATGCCATCCACAACTACTACCA
TCCACACCAGCCGCCGACGCGTCTTCAACTCCGTCCTCCCTTCCGCGTCC
CTAGAAGATTTCCCATCCGCAGGCCTCGCAATCGGACCTACAACCTCCAC
TCTCTTTCCGACATTCTCCTCCGGCGCGAAAACCCGCGATAGCAGCTCGC
AGTTTCGATCTTCGGTAACGTCAGATAAAACCGACATAGATGAGCCATGG
ATGGACCAAGCGACGCTGGATCGCGCCTGGCGGGTTGCGACAACCTTCCT
TGCCATCCCGGACTGCGGGTTCGACATACTCTACCGATATGAAGATATAG
GAGAGGCGAAGTTCTTGCGATTGACGAATCGCGATAAGAAGCCTTCGCGG
GAGGTGATTGAGGCGTTCGAGTACTTGATGAAGCCTTTTACAATGGGATT
GGACGTGGCGGAGGATATGGCGCAAAGGAACATACTGGATTGGTATGCGT
ATGAGATGCGGAGGCACTTTTTGAAGAATTTTAGGGGCGGGCTGTACAAG
GTAGGATTCAAATCCGGGGTTCTTCCAATTACGTGCGTGGTGCTGATCGC
GGAGTATACAGCTTCTAAATTATCCTCACAAAGAAAGGTTGCTACATAAG
ATCGTGGACTGCTTGCAGTTGGCAAGGAGGATATACTTTTCGCACTTGAT
GGAATATCTGCTGCCGCTTCTGGATACTCCCGATCAGGAGCCTATGTTCG
TTAAGCTCCGGACGTCCTTCCACATGATGGTGGCTTATGCGTTGCCGTGG
TCGTTGAGGTCCACGTTGCTGACTCATGTGATTACTACGGAGGCACTGGT
TATCCTCGGAATTGATAAGCTGGGTGAGGAGAGAGATGCCGACGAGTCAG
GGAGCGTTGATGATATGGAGGTCGATCGGCAATTCTCGGTCTCGTACCAG
GACTGGCGAAATGAACCCTCTGTCGATGCCAGAATGATGCTGATGGCCGG
AGAGGATGCGCGTGTCAGTGCGTCTCGAGAGATCCTCCTGGTGCTCTTTG
ATGGACTACAGATGGTTGGGATGGGCGGCGATAAGGCGCAGAAGGTCTTT
GCTAGTGTCATGGACACCATGCTGAGCGAGTTCATTCGAGCGGCATACAC
CGGGCAATGGGAAGGGCCGTCACTAGTCGTCCAGCATTTACGGCACTGGA
TTGAGAATGTTTTCGCGCGGCTGGTCGTGCAAGTCCTAGCAATTATCAAC
ACCCCCGAATCTGGTGTGAGGGAACCGGATAGTCTCGATGTGAATCTGAG
TGACGTGGAGAAGTGGCAGGAAATCGGAATTTCTCGCCTCGGGGCTCTCC
GGGCAGGCGAACTCTTTGATATCATTGTCGAGTGGCCTGCGAGCAGTGGA
GCCATCGAAGATTTACGACACTTTACTACATATCCAGCAGCGCGGTCCCA
CCTGACGCACTCTTTTATTGCCGTTCTCAATCAACGATTGCTGCACCCAG
GTGCTTCTACCGTCGAAATTCTGCAGGTGTATATCTCCATTATACGAGCA
TTCAACCTGCTAGATCCTAAGGGGGTGCTTCTGGATCGGATTGCTCGGCC
CATTCGCAGATATCTTCGCGACCGCGACGACACAGTCAAAGTCATAGTTG
GCGGACTCTTGTCTGACCCGGCCGATGCTGATGGACAAACTGCTTCACAC
ACGGATACACTGGTGGAGTTGTCAGCTGAATTGACCAAAGCACACCAGAA
TTCGCTGCGAGCTGATAGTGGGGAGCTCGACTGGGATGACATGAACTGGG
TACCCGATCCGGTCGATGCGGCACCAGACTATCGGAAGTCGAAAACGTCC
GACGTTATTGGAAGCCTTATCAGTCTGTTCGAGTCCAAGGAGATGTTTGT
CAAGGAGATGCAGAACATGCTGGGCGAGCGGCTACTACAGAAGCGCGCCG
ACTTTGACCAGGAGATGTCCGTTCTGGAACTTCTCAAGGTGCGCTTTGGC
GACAATGCCTTGCAAGCCTGTGAAGTCATGCTGCGGGACATTTTTGACTC
CCGTCGCGTTGACGCCGTTATACGCAATGATCAAGGATTGAGCGGGAAGC
GCAAGGCCGCGCCACTGCCAGTTACTCCTGATGGTAGACGAGCGCCAGAG
GACGAGGAAGACATGCCAGAGCTTCACGCCAAGATCCTGTCCCACTTCTT
CTGGCCTGAGATTCAAGGGCTGGAATTTAATGTTCCAGAGGAGATTTCTT
CGCTCCAGCAGCGATACGCGCAAGGATTCGGATCGCTCAAGCAGTCGCGC
AAGCTCACCTGGCTGAATGGACTCGGACAGGTCACTGTCGAGCTAGATCT
CGAGGATCGTGTGTTCATGGACGAGGTTACCACCTGGCAAGCTACGGTGA
TCTACGCCTTCAATTCTGAGTCGGATGAGGCCGTGACCAGGACAACGGAC
GAACTCGCCGGTGAACTTGGGATGTCGACTGCACTCGTGCGAAGCGCATG
TCTCTTCTGGGTAAGCAAGCGCATTCTAATGGAAACACAGCGGGATACAT
TCCGAGTCCTGGAAGTTCTTCCGAGCGAGGAGGGAGATGCATCAGGCGGA
GAGCCCGGGTTACCTGGCGCAGGTGATGCGGAGGATCAGTCTGCAGAAAC
AGCACAAGCAGCAGCCGAGGCCGATGCGGCCGCGGCAGCAGCAGCGAAGG
AAACGGCCGAAGCGGCGGCGATGGAGAAGATGAATCTCTATTGGCAATTC
ATTGTGGGCATGTTGACCAACCAGGGCGCAATGCCACTGCAACGAATCGT
GATGATGCTAAAGATTGCCGTTCCGGGGGGATTCCCGTATAGCAACGAGG
AGCTGCGAGAGTTCCTGGCTGGGATGGTCTCCAAAGGCAAGCTGGAAATT
ATCAGCGGAGGTAACTACAAAATTGTGCAGTGACCCCCTATTATATCTAC
CGATAGAAAGAGGCAAAACTTGTATGAATTACGATTAATGAGGCACACGA
GGTATAACATAATCCGAATAACTAATTTAACATGGTATTGAAGCTAAACG
TACACATTACAGACATGAATATCATTGAATCATTTTGACCCGTTCACTCA
GCATCCAAGGGAGCCACCGGGGCCTGATCATCAACCTGGATACCACCCCT
CTTCTTCTCATTGCTATCCCAGAACGGCAGCTTCCATCCGCCCTCGCTCT
CCGGCGTAGCCAAC back to topCoding sequence (CDS) from alignment at ch2:2648402..2651665+ >KJC3_002471-T1 ID=KJC3_002471-T1|Name=KJC3_002471-T1|organism=Aspergillus niger KJC3|type=CDS|length=5688bp|location=Sequence derived from alignment at ch2:2648402..2651665+ (Aspergillus niger KJC3)
ATGCCATCCACAACTACTACCATCCACACCAGCCGCCGACGCGTCTTCAA
CTCCGTCCTCCCTTCCGCGTCCCTAGAAGATTTCCCATCCGCAGGCCTCG
CAATCGGACCTACAACCTCCACTCTCTTTCCGACATTCTCCTCCGGCGCG
AAAACCCGCGATAGCAGCTCGCAGTTTCGATCTTCGGTAACGTCAGATAA
AACCGACATAGATGAGCCATGGATGGACCAAGCGACGCTGGATCGCGCCT
GGCGGGTTGCGACAACCTTCCTTGCCATCCCGGACTGCGGGTTCGACATA
CTCTACCGATATGAAGATATAGGAGAGGCGAAGTTCTTGCGATTGACGAA
TCGCGATAAGAAGCCTTCGCGGGAGGTGATTGAGGCGTTCGAGTACTTGA
TGAAGCCTTTTACAATGGGATTGGACGTGGCGGAGGATATGGCGCAAAGG
AACATACTGGATTGGTATGCGTATGAGATGCGGAGGCACTTTTTGAAGAA
TTTTAGGGGCGGGCTGTACAAGCTTCTAAATTATCCTCACAAAGAAAGGT
TGCTACATAAGATCGTGGACTGCTTGCAGTTGGCAAGGAGGATATACTTT
TCGCACTTGATGGAATATCTGCTGCCGCTTCTGGATACTCCCGATCAGGA
GCCTATGTTCGTTAAGCTCCGGACGTCCTTCCACATGATGGTGGCTTATG
CGTTGCCGTGGTCGTTGAGGTCCACGTTGCTGACTCATGTGATTACTACG
GAGGCACTGGTTATCCTCGGAATTGATAAGCTGGGTGAGGAGAGAGATGC
CGACGAGTCAGGGAGCGTTGATGATATGGAGGTCGATCGGCAATTCTCGG
TCTCGTACCAGGACTGGCGAAATGAACCCTCTGTCGATGCCAGAATGATG
CTGATGGCCGGAGAGGATGCGCGTGTCAGTGCGTCTCGAGAGATCCTCCT
GGTGCTCTTTGATGGACTACAGATGGTTGGGATGGGCGGCGATAAGGCGC
AGAAGGTCTTTGCTAGTGTCATGGACACCATGCTGAGCGAGTTCATTCGA
GCGGCATACACCGGGCAATGGGAAGGGCCGTCACTAGTCGTCCAGCATTT
ACGGCACTGGATTGAGAATGTTTTCGCGCGGCTGGTCGTGCAAGTCCTAG
CAATTATCAACACCCCCGAATCTGGTGTGAGGGAACCGGATAGTCTCGAT
GTGAATCTGAGTGACGTGGAGAAGTGGCAGGAAATCGGAATTTCTCGCCT
CGGGGCTCTCCGGGCAGGCGAACTCTTTGATATCATTGTCGAGTGGCCTG
CGAGCAGTGGAGCCATCGAAGATTTACGACACTTTACTACATATCCAGCA
GCGCGGTCCCACCTGACGCACTCTTTTATTGCCGTTCTCAATCAACGATT
GCTGCACCCAGGTGCTTCTACCGTCGAAATTCTGCAGGTGTATATCTCCA
TTATACGAGCATTCAACCTGCTAGATCCTAAGGGGGTGCTTCTGGATCGG
ATTGCTCGGCCCATTCGCAGATATCTTCGCGACCGCGACGACACAGTCAA
AGTCATAGTTGGCGGACTCTTGTCTGACCCGGCCGATGCTGATGGACAAA
CTGCTTCACACACGGATACACTGGTGGAGTTGTCAGCTGAATTGACCAAA
GCACACCAGAATTCGCTGCGAGCTGATAGTGGGGAGCTCGACTGGGATGA
CATGAACTGGGTACCCGATCCGGTCGATGCGGCACCAGACTATCGGAAGT
CGAAAACGTCCGACGTTATTGGAAGCCTTATCAGTCTGTTCGAGTCCAAG
GAGATGTTTGTCAAGGAGATGCAGAACATGCTGGGCGAGCGGCTACTACA
GAAGCGCGCCGACTTTGACCAGGAGATGTCCGTTCTGGAACTTCTCAAGG
TGCGCTTTGGCGACAATGCCTTGCAAGCCTGTGAAGTCATGCTGCGGGAC
ATTTTTGACTCCCGTCGCGTTGACGCCGTTATACGCAATGATCAAGGATT
GAGCGGGAAGCGCAAGGCCGCGCCACTGCCAGTTACTCCTGATGGTAGAC
GAGCGCCAGAGGACGAGGAAGACATGCCAGAGCTTCACGCCAAGATCCTG
TCCCACTTCTTCTGGCCTGAGATTCAAGGGCTGGAATTTAATGTTCCAGA
GGAGATTTCTTCGCTCCAGCAGCGATACGCGCAAGGATTCGGATCGCTCA
AGCAGTCGCGCAAGCTCACCTGGCTGAATGGACTCGGACAGGTCACTGTC
GAGCTAGATCTCGAGGATCGTGTGTTCATGGACGAGGTTACCACCTGGCA
AGCTACGGTGATCTACGCCTTCAATTCTGAGTCGGATGAGGCCGTGACCA
GGACAACGGACGAACTCGCCGGTGAACTTGGGATGTCGACTGCACTCGTG
CGAAGCGCATGTCTCTTCTGGGTAAGCAAGCGCATTCTAATGGAAACACA
GCGGGATACATTCCGAGTCCTGGAAGTTCTTCCGAGCGAGGAGGGAGATG
CATCAGGCGGAGAGCCCGGGTTACCTGGCGCAGGTGATGCGGAGGATCAG
TCTGCAGAAACAGCACAAGCAGCAGCCGAGGCCGATGCGGCCGCGGCAGC
AGCAGCGAAGGAAACGGCCGAAGCGGCGGCGATGGAGAAGATGAATCTCT
ATTGGCAATTCATTGTGGGCATGTTGACCAACCAGGGCGCAATGCCACTG
CAACGAATCGTGATGATGCTAAAGATTGCCGTTCCGGGGGGATTCCCGTA
TAGCAACGAGGAGCTGCGAGAGTTCCTGGCTGGGATGGTCTCCAAAGGCA
AGCTGGAAATTATCAGCGGAGGTAACTACAAAATTGTGCAGTGAATGCCA
TCCACAACTACTACCATCCACACCAGCCGCCGACGCGTCTTCAACTCCGT
CCTCCCTTCCGCGTCCCTAGAAGATTTCCCATCCGCAGGCCTCGCAATCG
GACCTACAACCTCCACTCTCTTTCCGACATTCTCCTCCGGCGCGAAAACC
CGCGATAGCAGCTCGCAGTTTCGATCTTCGGTAACGTCAGATAAAACCGA
CATAGATGAGCCATGGATGGACCAAGCGACGCTGGATCGCGCCTGGCGGG
TTGCGACAACCTTCCTTGCCATCCCGGACTGCGGGTTCGACATACTCTAC
CGATATGAAGATATAGGAGAGGCGAAGTTCTTGCGATTGACGAATCGCGA
TAAGAAGCCTTCGCGGGAGGTGATTGAGGCGTTCGAGTACTTGATGAAGC
CTTTTACAATGGGATTGGACGTGGCGGAGGATATGGCGCAAAGGAACATA
CTGGATTGGTATGCGTATGAGATGCGGAGGCACTTTTTGAAGAATTTTAG
GGGCGGGCTGTACAAGCTTCTAAATTATCCTCACAAAGAAAGGTTGCTAC
ATAAGATCGTGGACTGCTTGCAGTTGGCAAGGAGGATATACTTTTCGCAC
TTGATGGAATATCTGCTGCCGCTTCTGGATACTCCCGATCAGGAGCCTAT
GTTCGTTAAGCTCCGGACGTCCTTCCACATGATGGTGGCTTATGCGTTGC
CGTGGTCGTTGAGGTCCACGTTGCTGACTCATGTGATTACTACGGAGGCA
CTGGTTATCCTCGGAATTGATAAGCTGGGTGAGGAGAGAGATGCCGACGA
GTCAGGGAGCGTTGATGATATGGAGGTCGATCGGCAATTCTCGGTCTCGT
ACCAGGACTGGCGAAATGAACCCTCTGTCGATGCCAGAATGATGCTGATG
GCCGGAGAGGATGCGCGTGTCAGTGCGTCTCGAGAGATCCTCCTGGTGCT
CTTTGATGGACTACAGATGGTTGGGATGGGCGGCGATAAGGCGCAGAAGG
TCTTTGCTAGTGTCATGGACACCATGCTGAGCGAGTTCATTCGAGCGGCA
TACACCGGGCAATGGGAAGGGCCGTCACTAGTCGTCCAGCATTTACGGCA
CTGGATTGAGAATGTTTTCGCGCGGCTGGTCGTGCAAGTCCTAGCAATTA
TCAACACCCCCGAATCTGGTGTGAGGGAACCGGATAGTCTCGATGTGAAT
CTGAGTGACGTGGAGAAGTGGCAGGAAATCGGAATTTCTCGCCTCGGGGC
TCTCCGGGCAGGCGAACTCTTTGATATCATTGTCGAGTGGCCTGCGAGCA
GTGGAGCCATCGAAGATTTACGACACTTTACTACATATCCAGCAGCGCGG
TCCCACCTGACGCACTCTTTTATTGCCGTTCTCAATCAACGATTGCTGCA
CCCAGGTGCTTCTACCGTCGAAATTCTGCAGGTGTATATCTCCATTATAC
GAGCATTCAACCTGCTAGATCCTAAGGGGGTGCTTCTGGATCGGATTGCT
CGGCCCATTCGCAGATATCTTCGCGACCGCGACGACACAGTCAAAGTCAT
AGTTGGCGGACTCTTGTCTGACCCGGCCGATGCTGATGGACAAACTGCTT
CACACACGGATACACTGGTGGAGTTGTCAGCTGAATTGACCAAAGCACAC
CAGAATTCGCTGCGAGCTGATAGTGGGGAGCTCGACTGGGATGACATGAA
CTGGGTACCCGATCCGGTCGATGCGGCACCAGACTATCGGAAGTCGAAAA
CGTCCGACGTTATTGGAAGCCTTATCAGTCTGTTCGAGTCCAAGGAGATG
TTTGTCAAGGAGATGCAGAACATGCTGGGCGAGCGGCTACTACAGAAGCG
CGCCGACTTTGACCAGGAGATGTCCGTTCTGGAACTTCTCAAGGTGCGCT
TTGGCGACAATGCCTTGCAAGCCTGTGAAGTCATGCTGCGGGACATTTTT
GACTCCCGTCGCGTTGACGCCGTTATACGCAATGATCAAGGATTGAGCGG
GAAGCGCAAGGCCGCGCCACTGCCAGTTACTCCTGATGGTAGACGAGCGC
CAGAGGACGAGGAAGACATGCCAGAGCTTCACGCCAAGATCCTGTCCCAC
TTCTTCTGGCCTGAGATTCAAGGGCTGGAATTTAATGTTCCAGAGGAGAT
TTCTTCGCTCCAGCAGCGATACGCGCAAGGATTCGGATCGCTCAAGCAGT
CGCGCAAGCTCACCTGGCTGAATGGACTCGGACAGGTCACTGTCGAGCTA
GATCTCGAGGATCGTGTGTTCATGGACGAGGTTACCACCTGGCAAGCTAC
GGTGATCTACGCCTTCAATTCTGAGTCGGATGAGGCCGTGACCAGGACAA
CGGACGAACTCGCCGGTGAACTTGGGATGTCGACTGCACTCGTGCGAAGC
GCATGTCTCTTCTGGGTAAGCAAGCGCATTCTAATGGAAACACAGCGGGA
TACATTCCGAGTCCTGGAAGTTCTTCCGAGCGAGGAGGGAGATGCATCAG
GCGGAGAGCCCGGGTTACCTGGCGCAGGTGATGCGGAGGATCAGTCTGCA
GAAACAGCACAAGCAGCAGCCGAGGCCGATGCGGCCGCGGCAGCAGCAGC
GAAGGAAACGGCCGAAGCGGCGGCGATGGAGAAGATGAATCTCTATTGGC
AATTCATTGTGGGCATGTTGACCAACCAGGGCGCAATGCCACTGCAACGA
ATCGTGATGATGCTAAAGATTGCCGTTCCGGGGGGATTCCCGTATAGCAA
CGAGGAGCTGCGAGAGTTCCTGGCTGGGATGGTCTCCAAAGGCAAGCTGG
AAATTATCAGCGGAGGTAACTACAAAATTGTGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0031625 | ubiquitin protein ligase binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002471-T1.utr5p1 | KJC3_002471-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260FKU |
| DBxref | InterPro:IPR036317 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR001373 |
| DBxref | InterPro:IPR014786 |
| DBxref | InterPro:IPR016158 |
| DBxref | PFAM:PF08672 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2648402..2651665 + |
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