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KJC3_002478-T1, KJC3_002478-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002478-T1
Unique NameKJC3_002478-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2669153..2670748+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002478-T1 ID=KJC3_002478-T1|Name=KJC3_002478-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1596bp|location=Sequence derived from alignment at ch2:2669153..2670748+ (Aspergillus niger KJC3)
CCCCTTCCCCATTCCCTCTCACACGCTCGCCTCCTGACAAATGATATCTG
GAAGCTAAGACGATCATCTACTAGTCCTATCAATTTCGCTACCATCTCTG
TGCTTTCATTATCAGTTCCATTGACAGTGAGTCACCTCTCATCATGTGCG
AAACGCATGGCCAGGCACCCATGTCCTTTCTAACCAACGTGTTGCTGCTA
GAGCCTCTAGAGCACATCAAACCATGACATCCCAGCCATGCAGCCAGATT
GATGAGGAGATCTTCGTTGTCGCTCAGCAACTTCAGGAGATACAAGCTTA
TCTTGACAGTCAAAAAGGGAAGCGTCGGGCCGATGGGAGCCCCAAGGACG
GCCAGGATATTATAAGAGAACAGTATGAAGAGCTTAGAACGTATCTAAGA
TCACTGGAGGACAAGAAGCTCGCTACGAGTATTGCTTTGGCGGTAGACTC
TGATAGCCGTGTTATTGCTGCGCTTACACGTGAAGAAGCTCAGGCAAGCG
ATGATCGACGTTTAGCAATCAGAATGAGTGTGAGAGACGATGACCCGGAC
TCTTTGACAATGGAAAGTGAGGTGGAGCAGCCTAACGCTGTCGGAGAGCC
CCAGTCTAGTGATGATGAGTGCGTCGCAGGTCCCTCCATGACCTACAGAG
AGAGACAGGCCTTGGAACTTGAGAAGTCGGCCGCCACAGAAACACAATGC
TGTGTGTGCTACGAAAGCTTTTACACTCACAAGGTGACGCGATTGGACTG
CAACCATAAATACTGTAACGATTGTCTCAAGGATCTTTTCCGGAGAGCGA
CGAAGGACTCAACTCTGTTCCCCCCACGATGTTGTCGTATGCCGATTCAT
CTAGAAATTGTTCAGAAACACATGTCAGAGACTGAGATATCCGACTTCAG
AAGCGCGGAGATAGAGTTTGCTACGACAGACCGGACCTACTGCTGCAATG
CCAGCTGCGGCAAGTTCATACTACCTCACAACATCACAGCCGGCCGAGCC
CAGTGTCCTCACTGCAGATCCGATACCTGCGCAATGTGCAAAAACTCATT
CCATACTGATGACTGTGTTGAGGACGCCGACCTCCAAGCTACACTAGCGC
TGGCCAGCACCCAACGCTGGCAACGGTGTTTCCGTTGCAGGGCTCTCGTC
GACCTGGGCATTGGCTGTTACCACATCACGTATTGCAAAGACTCCCGCCC
CTATTACCCACTTCTACTGACTTACCTATTCAAACAGGTGCAAATGTCGA
GCCGAGTTTTGCTACCTCTGCGGCCTTCAGTGGAAGACTTGTGAATGCGT
CGTATGGGCCGAGGAAAGACTCGTCGCCAGAGCGGTGGAAGTCGTGGACC
GTCAGGCTGAAGCGCCCTTGCCACCTCAGGTCCGTCAACAACGGGTTAGA
CAGATGCAGGAAGATCTGCGACATAATCACGAGTGTGAACATCCCGGAAG
ATTCCGCCGTCTTGAAGGTTCAAGGAGGAGGGTATTCGAATGTGAGTTCT
GTGGAGCCCGCCACCGGAATTATATTCTTGAGTGCCGCCATTGCCATATC
GAACTTTGTGAGAGTTGCCGACGCCATCGCATTTAAGGCGGCATAG
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Coding sequence (CDS) from alignment at ch2:2669153..2670748+

>KJC3_002478-T1 ID=KJC3_002478-T1|Name=KJC3_002478-T1|organism=Aspergillus niger KJC3|type=CDS|length=2604bp|location=Sequence derived from alignment at ch2:2669153..2670748+ (Aspergillus niger KJC3)
ATGACATCCCAGCCATGCAGCCAGATTGATGAGGAGATCTTCGTTGTCGC
TCAGCAACTTCAGGAGATACAAGCTTATCTTGACAGTCAAAAAGGGAAGC
GTCGGGCCGATGGGAGCCCCAAGGACGGCCAGGATATTATAAGAGAACAG
TATGAAGAGCTTAGAACGTATCTAAGATCACTGGAGGACAAGAAGCTCGC
TACGAGTATTGCTTTGGCGGTAGACTCTGATAGCCGTGTTATTGCTGCGC
TTACACGTGAAGAAGCTCAGGCAAGCGATGATCGACGTTTAGCAATCAGA
ATGAGTGTGAGAGACGATGACCCGGACTCTTTGACAATGGAAAGTGAGGT
GGAGCAGCCTAACGCTGTCGGAGAGCCCCAGTCTAGTGATGATGAGTGCG
TCGCAGGTCCCTCCATGACCTACAGAGAGAGACAGGCCTTGGAACTTGAG
AAGTCGGCCGCCACAGAAACACAATGCTGTGTGTGCTACGAAAGCTTTTA
CACTCACAAGGTGACGCGATTGGACTGCAACCATAAATACTGTAACGATT
GTCTCAAGGATCTTTTCCGGAGAGCGACGAAGGACTCAACTCTGTTCCCC
CCACGATGTTGTCGTATGCCGATTCATCTAGAAATTGTTCAGAAACACAT
GTCAGAGACTGAGATATCCGACTTCAGAAGCGCGGAGATAGAGTTTGCTA
CGACAGACCGGACCTACTGCTGCAATGCCAGCTGCGGCAAGTTCATACTA
CCTCACAACATCACAGCCGGCCGAGCCCAGTGTCCTCACTGCAGATCCGA
TACCTGCGCAATGTGCAAAAACTCATTCCATACTGATGACTGTGTTGAGG
ACGCCGACCTCCAAGCTACACTAGCGCTGGCCAGCACCCAACGCTGGCAA
CGGTGTTTCCGTTGCAGGGCTCTCGTCGACCTGGGCATTGGCTGTGCAAA
TGTCGAGCCGAGTTTTGCTACCTCTGCGGCCTTCAGTGGAAGACTTGTGA
ATGCGTCGTATGGGCCGAGGAAAGACTCGTCGCCAGAGCGGTGGAAGTCG
TGGACCGTCAGGCTGAAGCGCCCTTGCCACCTCAGGTCCGTCAACAACGG
GTTAGACAGATGCAGGAAGATCTGCGACATAATCACGAGTGTGAACATCC
CGGAAGATTCCGCCGTCTTGAAGGTTCAAGGAGGAGGGTATTCGAATGTG
AGTTCTGTGGAGCCCGCCACCGGAATTATATTCTTGAGTGCCGCCATTGC
CATATCGAACTTTGTGAGAGTTGCCGACGCCATCGCATTTAAGGCGGCAT
AGATGACATCCCAGCCATGCAGCCAGATTGATGAGGAGATCTTCGTTGTC
GCTCAGCAACTTCAGGAGATACAAGCTTATCTTGACAGTCAAAAAGGGAA
GCGTCGGGCCGATGGGAGCCCCAAGGACGGCCAGGATATTATAAGAGAAC
AGTATGAAGAGCTTAGAACGTATCTAAGATCACTGGAGGACAAGAAGCTC
GCTACGAGTATTGCTTTGGCGGTAGACTCTGATAGCCGTGTTATTGCTGC
GCTTACACGTGAAGAAGCTCAGGCAAGCGATGATCGACGTTTAGCAATCA
GAATGAGTGTGAGAGACGATGACCCGGACTCTTTGACAATGGAAAGTGAG
GTGGAGCAGCCTAACGCTGTCGGAGAGCCCCAGTCTAGTGATGATGAGTG
CGTCGCAGGTCCCTCCATGACCTACAGAGAGAGACAGGCCTTGGAACTTG
AGAAGTCGGCCGCCACAGAAACACAATGCTGTGTGTGCTACGAAAGCTTT
TACACTCACAAGGTGACGCGATTGGACTGCAACCATAAATACTGTAACGA
TTGTCTCAAGGATCTTTTCCGGAGAGCGACGAAGGACTCAACTCTGTTCC
CCCCACGATGTTGTCGTATGCCGATTCATCTAGAAATTGTTCAGAAACAC
ATGTCAGAGACTGAGATATCCGACTTCAGAAGCGCGGAGATAGAGTTTGC
TACGACAGACCGGACCTACTGCTGCAATGCCAGCTGCGGCAAGTTCATAC
TACCTCACAACATCACAGCCGGCCGAGCCCAGTGTCCTCACTGCAGATCC
GATACCTGCGCAATGTGCAAAAACTCATTCCATACTGATGACTGTGTTGA
GGACGCCGACCTCCAAGCTACACTAGCGCTGGCCAGCACCCAACGCTGGC
AACGGTGTTTCCGTTGCAGGGCTCTCGTCGACCTGGGCATTGGCTGTGCA
AATGTCGAGCCGAGTTTTGCTACCTCTGCGGCCTTCAGTGGAAGACTTGT
GAATGCGTCGTATGGGCCGAGGAAAGACTCGTCGCCAGAGCGGTGGAAGT
CGTGGACCGTCAGGCTGAAGCGCCCTTGCCACCTCAGGTCCGTCAACAAC
GGGTTAGACAGATGCAGGAAGATCTGCGACATAATCACGAGTGTGAACAT
CCCGGAAGATTCCGCCGTCTTGAAGGTTCAAGGAGGAGGGTATTCGAATG
TGAGTTCTGTGGAGCCCGCCACCGGAATTATATTCTTGAGTGCCGCCATT
GCCATATCGAACTTTGTGAGAGTTGCCGACGCCATCGCATTTAAGGCGGC
ATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002478KJC3_002478Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002478-T1KJC3_002478-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002478-T1.utr5p1KJC3_002478-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_002478-T1.utr5p2KJC3_002478-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002478-T1.exon1KJC3_002478-T1.exon1Aspergillus niger KJC3exon
KJC3_002478-T1.exon2KJC3_002478-T1.exon2Aspergillus niger KJC3exon
KJC3_002478-T1.exon3KJC3_002478-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002478-T1.cdsKJC3_002478-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR002867
DBxrefInterPro:IPR013083
DBxrefPFAM:PF01485
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2669153..2670748 +
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