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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2728989..2729938- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002496-T1 ID=KJC3_002496-T1|Name=KJC3_002496-T1|organism=Aspergillus niger KJC3|type=mRNA|length=950bp|location=Sequence derived from alignment at ch2:2728989..2729938- (Aspergillus niger KJC3)
CCACCACCACCACTTTTGACCACCAAGACATATCCATCTCCCCAATCCAC
TAAACCGGAGACTTTATCAGACGAAAAGAAAGAGGGATCAAGATGCTCCC
CACCCCTTGCACCTCCCACGTCTCCTTCGACACCATCTACGAACCCTCCG
AAGACTCTTACCTTTTCTTGGATACGCTCTCCTCCCCCACCGAATCCGCC
TGGCTCACGAACCACTTCTCCCCCTCTACATCCTCACCATCCCCTCTCCT
CCTCGAGGTCGGTACCGGCTCCGGCGTCGTCCTCGCCTTCCTCACCGCAA
ACTCCCACCACATTCTCGGCCGCACCGATGTCCTCGCTCTCGGTACGGAT
GTGAACCGCAATGCATGTCTCGCGACGAGACAGACAGTTCTGAAGGCGAT
TGAGGAGCAGCAACAGCAACAACAACAACAACAATCCCAAGCAACCTCTA
CAGATGAGCCTGGCGCTCCCTCCAAGAATACCTCAATCAAATCCCTCATC
TCCTCAACATTAACCTCCGACCTCGCCTCCCCGATCCGTCCCCACTCGAT
CGATATCCTCCTATTCAACCCGCCGTATGTGCCTACGCCAGAGTTACCGC
GGTTACCTAGTAAGGAGGATAACGAAGAAGATAAGGAAGTGTCAAGGAGT
GAGAAGTTCGAGAGGGAGTCGTATTTCCTCTCGTTGACGTATGCGGGGGG
CAAGGATGGGATGGAGATTACGGAGAGGTTGTTGGCGGATATTCCGAGGG
TGTTGAGTGAACGGGGCGTGGCGTATGTGTTGCTTTGTGCGCAGAATCGG
CCAAGGGAGGTAGTGGAACGGATACAGGGGTGGGATGTTGATATGGAAGG
GGGGAAGTGGTGTGCTGAGTTGGTTGGGAGTAGTGGGGTACAGGCGGGGT
GGGAGAAGTTGGTTATTGTGAGGGTTTGGAGGGATTTCTCTACTTCATAA
back to topCoding sequence (CDS) from alignment at ch2:2728989..2729938- >KJC3_002496-T1 ID=KJC3_002496-T1|Name=KJC3_002496-T1|organism=Aspergillus niger KJC3|type=CDS|length=858bp|location=Sequence derived from alignment at ch2:2728989..2729938- (Aspergillus niger KJC3)
ATGCTCCCCACCCCTTGCACCTCCCACGTCTCCTTCGACACCATCTACGA
ACCCTCCGAAGACTCTTACCTTTTCTTGGATACGCTCTCCTCCCCCACCG
AATCCGCCTGGCTCACGAACCACTTCTCCCCCTCTACATCCTCACCATCC
CCTCTCCTCCTCGAGGTCGGTACCGGCTCCGGCGTCGTCCTCGCCTTCCT
CACCGCAAACTCCCACCACATTCTCGGCCGCACCGATGTCCTCGCTCTCG
GTACGGATGTGAACCGCAATGCATGTCTCGCGACGAGACAGACAGTTCTG
AAGGCGATTGAGGAGCAGCAACAGCAACAACAACAACAACAATCCCAAGC
AACCTCTACAGATGAGCCTGGCGCTCCCTCCAAGAATACCTCAATCAAAT
CCCTCATCTCCTCAACATTAACCTCCGACCTCGCCTCCCCGATCCGTCCC
CACTCGATCGATATCCTCCTATTCAACCCGCCGTATGTGCCTACGCCAGA
GTTACCGCGGTTACCTAGTAAGGAGGATAACGAAGAAGATAAGGAAGTGT
CAAGGAGTGAGAAGTTCGAGAGGGAGTCGTATTTCCTCTCGTTGACGTAT
GCGGGGGGCAAGGATGGGATGGAGATTACGGAGAGGTTGTTGGCGGATAT
TCCGAGGGTGTTGAGTGAACGGGGCGTGGCGTATGTGTTGCTTTGTGCGC
AGAATCGGCCAAGGGAGGTAGTGGAACGGATACAGGGGTGGGATGTTGAT
ATGGAAGGGGGGAAGTGGTGTGCTGAGTTGGTTGGGAGTAGTGGGGTACA
GGCGGGGTGGGAGAAGTTGGTTATTGTGAGGGTTTGGAGGGATTTCTCTA
CTTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008168 | methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032259 | methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002496-T1.utr5p1 | KJC3_002496-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XVU |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR002052 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2728989..2729938 - |
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