|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2730078..2730944+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002497-T1 ID=KJC3_002497-T1|Name=KJC3_002497-T1|organism=Aspergillus niger KJC3|type=mRNA|length=867bp|location=Sequence derived from alignment at ch2:2730078..2730944+ (Aspergillus niger KJC3)
CCCGACTTCGTCTACTTGCCAATTGCCAACTTGCGATCCCAAAGTCACCT
CGAAGAGAGGAGAAAATCAGCATGTCCTTCCTACGCTTCACCCCCACGGC
AGCCCGCCGCCTCGCCACGCCCTCCACCTTCGGCTCCAAATCCAGTCTTT
CCGAGACCTTGGCCCTGCTACCGCCGCTGCAGCTCTACCGTCGCATTCTC
CGCGTGCACCGCAAGAAACTCGATCCGGAGATGCGGATTCTGGGTGATGG
CTATGTAAAGAGTGAATTCCGGGCTCATCGGAATGTGGATAATCCGTTGC
ATATTGTATACCATACCCACTCTCATAATCTAGTTCGTGTCTGGTCTTGT
GGATAGCTAATGACATGGTGATTTGTGGCAGATTGGTTTCCTCACGGAAT
GGCAATTATATGCGCAGAAATTGGAGGGAGATGCGTGGATTGGGGAGAAG
TTGGATAAGAGTAAATTGGATAAGATGAGTGGTGAGGATACTTCTTCTTC
TTCTCTTTTGTTTCTGCTTGGGATGGTCGTGTTGGCTTTGAGTGTGTACT
AACTGGAAGGCAGATCAGCAAATCGGGCAGCTGTATGAGCTTATGCAGGC
GATTCAGAATAAGGATGGGGAGGGAGAGGGTGGAGAGAAGCAATGATTGC
GATAGATGTTTAAGAAGGGGGGTAGAGATCTATGTTGGATACCCTGTGAT
AAGTAACTGTATGATATGGATTTAGTTGATGGGCTAGTTTGTAGAATATG
TATATAGAGGTAAATGAGATGGTTGTAGAGGGTATAACTGATGATAAGGA
TCAACTTGTTATATAGTATGAATCACTACGAATCAAATATGGCGACATAA
CTGCACCTATGGATGTC back to topCoding sequence (CDS) from alignment at ch2:2730078..2730944+ >KJC3_002497-T1 ID=KJC3_002497-T1|Name=KJC3_002497-T1|organism=Aspergillus niger KJC3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch2:2730078..2730944+ (Aspergillus niger KJC3)
ATGTCCTTCCTACGCTTCACCCCCACGGCAGCCCGCCGCCTCGCCACGCC
CTCCACCTTCGGCTCCAAATCCAGTCTTTCCGAGACCTTGGCCCTGCTAC
CGCCGCTGCAGCTCTACCGTCGCATTCTCCGCGTGCACCGCAAGAAACTC
GATCCGGAGATGCGGATTCTGGGTGATGGCTATGTAAAGAGTGAATTCCG
GGCTCATCGGAATGTGGATAATCCGTTGCATATTATTGGTTTCCTCACGG
AATGGCAATTATATGCGCAGAAATTGGAGGGAGATGCGTGGATTGGGGAG
AAGTTGGATAAGAGTAAATTGGATAAGATGAGTGATCAGCAAATCGGGCA
GCTGTATGAGCTTATGCAGGCGATTCAGAATAAGGATGGGGAGGGAGAGG
GTGGAGAGAAGCAATGAATGTCCTTCCTACGCTTCACCCCCACGGCAGCC
CGCCGCCTCGCCACGCCCTCCACCTTCGGCTCCAAATCCAGTCTTTCCGA
GACCTTGGCCCTGCTACCGCCGCTGCAGCTCTACCGTCGCATTCTCCGCG
TGCACCGCAAGAAACTCGATCCGGAGATGCGGATTCTGGGTGATGGCTAT
GTAAAGAGTGAATTCCGGGCTCATCGGAATGTGGATAATCCGTTGCATAT
TATTGGTTTCCTCACGGAATGGCAATTATATGCGCAGAAATTGGAGGGAG
ATGCGTGGATTGGGGAGAAGTTGGATAAGAGTAAATTGGATAAGATGAGT
GATCAGCAAATCGGGCAGCTGTATGAGCTTATGCAGGCGATTCAGAATAA
GGATGGGGAGGGAGAGGGTGGAGAGAAGCAATGAATGTCCTTCCTACGCT
TCACCCCCACGGCAGCCCGCCGCCTCGCCACGCCCTCCACCTTCGGCTCC
AAATCCAGTCTTTCCGAGACCTTGGCCCTGCTACCGCCGCTGCAGCTCTA
CCGTCGCATTCTCCGCGTGCACCGCAAGAAACTCGATCCGGAGATGCGGA
TTCTGGGTGATGGCTATGTAAAGAGTGAATTCCGGGCTCATCGGAATGTG
GATAATCCGTTGCATATTATTGGTTTCCTCACGGAATGGCAATTATATGC
GCAGAAATTGGAGGGAGATGCGTGGATTGGGGAGAAGTTGGATAAGAGTA
AATTGGATAAGATGAGTGATCAGCAAATCGGGCAGCTGTATGAGCTTATG
CAGGCGATTCAGAATAAGGATGGGGAGGGAGAGGGTGGAGAGAAGCAATG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002497-T1.utr5p1 | KJC3_002497-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002497-T1.utr3p1 | KJC3_002497-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092652TN |
| DBxref | PFAM:PF13233 |
| DBxref | PFAM:PF05347 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2730078..2730944 + |
|
