|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2732713..2735928- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002499-T1 ID=KJC3_002499-T1|Name=KJC3_002499-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3216bp|location=Sequence derived from alignment at ch2:2732713..2735928- (Aspergillus niger KJC3)
ATGCGTGCCATGTCCACCGCGTCAACGGCTACCACTGCGACCACCCACCC
CCCGGATGCCGGGGCCAACCTGTCCACGTCGCAGTTCTTCTCCTCCCCTC
CTCCTCCTCCTCCACCCGCCCTGTCTATCTCCCATGCCGACCAGTCAAGA
CCGCGACGAATCAAGTCCAAGTCGTCCCTACGAAGCCTCCGCAGCTTGGG
CAGTAGCAGTGAACCCGACGATAACCAACAACAACACGACCTCGGTTTCG
ACAAGACTCTTGTCCGCCCGTCAATTCTCCGTCGCTTGTCCCCCGGCCTG
GCTGCCCGCGTCAAGCTACTAGACGGTAGTAACAAACACAACAGTCCCTC
TCGCAACCCCGGTGCCGTCGGTCGGATTCCCGAGGAACAAATCAAAGAAC
TCGACAAATCGCATCAGGATTTATCCAAATCCATCAAGATCGAAAAGAAG
GGTCGCTCATGGAATGCTCTGCCTCGGCTACACAAGGATAAGAAATCTCA
CGAAAGTGAATCCGGTCATTTAGAGGTCCCCGAACCGCAGCTACCGGAAG
CAACCCCAGAGGAGTTGGAGGAGGTACCGACACCCGACTCGGATCGTCCC
CTGGATCTGCCTTCGGATCAAGAGCTGGAAGAGGCCCCACTCCCGGACGA
GGTTGAAGAAGCCGAGGAAGAGGCAGTGAAGGCTGAGGCTGTTGGGGAAG
AGGTTATTGAGGAAGACGCTGTTGCAGAGCAAGGCGTTGCAGAAGAAGTT
GTTGCGGAAGACGCTGTTGGGGTAGAGGCTACTCTGGAAGAGCCCCAAAC
CGACATGTCTGTTGTTGAGCATGCTCCGGCGCCATTAGAGCCCAGGCCAG
CTCCCGAATATGACGTCCCCGAGCAGACAGATTTCGAAAAATACATACAG
AGCACCAATGACGACGATTCGAACCCACCCCCGCCGCCGCCCAAAGACTC
CCCACGTCCACGATCGACCACTTCCTTAAGCTCACAATCCTACTTCAACC
CCCAAGGGTTGCAGCGCACCGAGTCCATCTACTCGTTTTCGCGCGCCTCG
TTTAGCAATCAACTCTCCCAGCTCACATCTATCCCCCTTCCGCAACCGTC
GTCGCTCGAGGCTAGTATCTCATCCATTGCAACCGCCCCTGCGGCGGTTC
GGGCGCTTACCGGAGCCGCGGAACAAATCCAGATATGGGTTAAGAAGGCA
TCGGATGTGCTAGGGGGACTGGATGCGGAGGATGACGTGGAATGGGCAGC
TGCGGCCGGACGAGAAGGTCTGGAGGGGGTGGACAAAGCGATTATCCGGT
TCGAGAGCCTGATCAACGTCTATGTCAGGGCGATCGAGGAAGTGCAGCTG
CGCGAGGATATTGGTGACGTGAGCACCGATAGCCTCCAAACGATTGTCGT
GCAGATGGACACGATCATACAAAGCTGGGCCCACATCAAGAATCGACTTC
GGGGGGTCAAAGGACAGGTTGAGCTGGCAATGGAGTGGGAAGAGCTGTGG
GGGAATGTCTTGGGCGATGTGACGGTGGAGGTGGAGAGTCTCACCGGGCT
GATCTTCGAGATGGAAGAAAAACGGCACTGGACGCTGGCAGGCGAGCAGG
ACTCTAGCGCCTCCGGGCTCGACATCAATGAGCTGGAGACTATCGTGGAA
GAGACCCCGTCGCAGGCGCAACTGCTGTCCAGCAAACGGCTCAGCATAGA
CCCCATACTTACCGGACCCCCTACGATGGATATGCCTGTCATTCAGACGC
CACATGACGATACAAATCACTCGAACCTCATTGCGCTGTTCGCGCGAATA
CAACCGTTGCGAGCGTCGCTGGATTTCTTGCCGATGAGAATGTCCATGTT
CCAAGCGCGGGCCGAGAAAATCTTTCCCAGCGCTTGTGAGGAGCTCGAGG
AGCGGCGGGGCCATCTCGAACAAAGCTTCCAAAAGCTGGAGCATGATGCA
GATGCGCTGCAGAAGGAGCTCAACGAAGACCGGTGGATCCTCGTGTTCCG
TAACGCGGGCGGACAGGCGCAGAAAATGTTTGACTCGGTGGAACGGAGCA
TCGCCAAACTGCAGGAGGCTATCGAGACCTGCGCCCATTTGCATGATGCA
ACGTTGTTTACGAAACGTATCGAAAGCTATGAGGCCAAGAAACAGCACTA
TGTCGCAGCAATTGAACGAGTAGTGTCGATTATTCGCAAGGGTGTCGATG
ACCGACTGACGGTGAACGGAGAGATTCTGCGACTGCTGTCGGACATGACC
TCGAGGGTCGACGCTTTGAAGGCGAGTGTGCGGGTGATGGATGAGTGGCT
GGAGGACATTAACTTTGTCCGATCACAGCATCTCCGGGACTCGATCTCGA
GTATCATGACGATGGACAGTCCTCTGACCGGCAGTGTCGCCGATACTCCG
GGAAGCTCCCCGGCATCATCAGTGGTGATGACGCCTGCCAACCCCCTTAA
GGGCTCTGCCACGCCTATGGGAACATCTAGTCGACGTGGCAGCTCAGTCA
GCTCTGCAGCGCGGACGACAATGTCTAAAATGCGACGGTACTCGGGCATC
CCGCAGGCGACGGCCGCGCTGACGAGCAAGAAGTCGGCTCTCCCCAAGCC
CACGCTCACTGCGCCGTCACCGAGTCGAATGGGCGCCGCCACACCCACCC
CTGCTGCGCGTAAGCCGGTCAAGCCGGCGCCGTCACCCATTCCCAACCGT
CCGCGCTGGACCAACAGCACCAACACGAACGATTTGTATGTCGGCCACGT
GTATAAACCCAATCCTACTCCCCGCAAGGCTTCTGCGCCTGGCCGCACTT
CGCGGCCCTCGTCGACCATACCTATGGGACCGTTCCGGCGCGACATGTCG
GTCTCTCCGGCACCGATGACGGCGCGCTCTATGAGTCGTGTTTCAAGCCG
GCTGACGAATCGCAGCCCAGAGCGCATGGGCTCTCCTACACCTAATCGAA
CTATCCTCGATCCCCCTCCTTACAGCAAGCTCCGGCGGCCAGACGGCATG
TCGAACGCGCCGCGCAGCCGACAGAGCTTTGCGGGGCTGTCGTTCAGCCG
CAGTGTGTCGCACGACCACGAACGAAACCTTGCCAGTCCAACGAAGACAC
CGCGGCCAGGCACCGCGCTGGGGCATTCCGCGAACCGGCGGATCAGCTTG
ATCCCATTGCCGAAGAACAACCCGACGCCTCGCAGCAAGCTCGGAGAGCG
GCCGCCATGGCGGTAA back to topCoding sequence (CDS) from alignment at ch2:2732713..2735928- >KJC3_002499-T1 ID=KJC3_002499-T1|Name=KJC3_002499-T1|organism=Aspergillus niger KJC3|type=CDS|length=3216bp|location=Sequence derived from alignment at ch2:2732713..2735928- (Aspergillus niger KJC3)
ATGCGTGCCATGTCCACCGCGTCAACGGCTACCACTGCGACCACCCACCC
CCCGGATGCCGGGGCCAACCTGTCCACGTCGCAGTTCTTCTCCTCCCCTC
CTCCTCCTCCTCCACCCGCCCTGTCTATCTCCCATGCCGACCAGTCAAGA
CCGCGACGAATCAAGTCCAAGTCGTCCCTACGAAGCCTCCGCAGCTTGGG
CAGTAGCAGTGAACCCGACGATAACCAACAACAACACGACCTCGGTTTCG
ACAAGACTCTTGTCCGCCCGTCAATTCTCCGTCGCTTGTCCCCCGGCCTG
GCTGCCCGCGTCAAGCTACTAGACGGTAGTAACAAACACAACAGTCCCTC
TCGCAACCCCGGTGCCGTCGGTCGGATTCCCGAGGAACAAATCAAAGAAC
TCGACAAATCGCATCAGGATTTATCCAAATCCATCAAGATCGAAAAGAAG
GGTCGCTCATGGAATGCTCTGCCTCGGCTACACAAGGATAAGAAATCTCA
CGAAAGTGAATCCGGTCATTTAGAGGTCCCCGAACCGCAGCTACCGGAAG
CAACCCCAGAGGAGTTGGAGGAGGTACCGACACCCGACTCGGATCGTCCC
CTGGATCTGCCTTCGGATCAAGAGCTGGAAGAGGCCCCACTCCCGGACGA
GGTTGAAGAAGCCGAGGAAGAGGCAGTGAAGGCTGAGGCTGTTGGGGAAG
AGGTTATTGAGGAAGACGCTGTTGCAGAGCAAGGCGTTGCAGAAGAAGTT
GTTGCGGAAGACGCTGTTGGGGTAGAGGCTACTCTGGAAGAGCCCCAAAC
CGACATGTCTGTTGTTGAGCATGCTCCGGCGCCATTAGAGCCCAGGCCAG
CTCCCGAATATGACGTCCCCGAGCAGACAGATTTCGAAAAATACATACAG
AGCACCAATGACGACGATTCGAACCCACCCCCGCCGCCGCCCAAAGACTC
CCCACGTCCACGATCGACCACTTCCTTAAGCTCACAATCCTACTTCAACC
CCCAAGGGTTGCAGCGCACCGAGTCCATCTACTCGTTTTCGCGCGCCTCG
TTTAGCAATCAACTCTCCCAGCTCACATCTATCCCCCTTCCGCAACCGTC
GTCGCTCGAGGCTAGTATCTCATCCATTGCAACCGCCCCTGCGGCGGTTC
GGGCGCTTACCGGAGCCGCGGAACAAATCCAGATATGGGTTAAGAAGGCA
TCGGATGTGCTAGGGGGACTGGATGCGGAGGATGACGTGGAATGGGCAGC
TGCGGCCGGACGAGAAGGTCTGGAGGGGGTGGACAAAGCGATTATCCGGT
TCGAGAGCCTGATCAACGTCTATGTCAGGGCGATCGAGGAAGTGCAGCTG
CGCGAGGATATTGGTGACGTGAGCACCGATAGCCTCCAAACGATTGTCGT
GCAGATGGACACGATCATACAAAGCTGGGCCCACATCAAGAATCGACTTC
GGGGGGTCAAAGGACAGGTTGAGCTGGCAATGGAGTGGGAAGAGCTGTGG
GGGAATGTCTTGGGCGATGTGACGGTGGAGGTGGAGAGTCTCACCGGGCT
GATCTTCGAGATGGAAGAAAAACGGCACTGGACGCTGGCAGGCGAGCAGG
ACTCTAGCGCCTCCGGGCTCGACATCAATGAGCTGGAGACTATCGTGGAA
GAGACCCCGTCGCAGGCGCAACTGCTGTCCAGCAAACGGCTCAGCATAGA
CCCCATACTTACCGGACCCCCTACGATGGATATGCCTGTCATTCAGACGC
CACATGACGATACAAATCACTCGAACCTCATTGCGCTGTTCGCGCGAATA
CAACCGTTGCGAGCGTCGCTGGATTTCTTGCCGATGAGAATGTCCATGTT
CCAAGCGCGGGCCGAGAAAATCTTTCCCAGCGCTTGTGAGGAGCTCGAGG
AGCGGCGGGGCCATCTCGAACAAAGCTTCCAAAAGCTGGAGCATGATGCA
GATGCGCTGCAGAAGGAGCTCAACGAAGACCGGTGGATCCTCGTGTTCCG
TAACGCGGGCGGACAGGCGCAGAAAATGTTTGACTCGGTGGAACGGAGCA
TCGCCAAACTGCAGGAGGCTATCGAGACCTGCGCCCATTTGCATGATGCA
ACGTTGTTTACGAAACGTATCGAAAGCTATGAGGCCAAGAAACAGCACTA
TGTCGCAGCAATTGAACGAGTAGTGTCGATTATTCGCAAGGGTGTCGATG
ACCGACTGACGGTGAACGGAGAGATTCTGCGACTGCTGTCGGACATGACC
TCGAGGGTCGACGCTTTGAAGGCGAGTGTGCGGGTGATGGATGAGTGGCT
GGAGGACATTAACTTTGTCCGATCACAGCATCTCCGGGACTCGATCTCGA
GTATCATGACGATGGACAGTCCTCTGACCGGCAGTGTCGCCGATACTCCG
GGAAGCTCCCCGGCATCATCAGTGGTGATGACGCCTGCCAACCCCCTTAA
GGGCTCTGCCACGCCTATGGGAACATCTAGTCGACGTGGCAGCTCAGTCA
GCTCTGCAGCGCGGACGACAATGTCTAAAATGCGACGGTACTCGGGCATC
CCGCAGGCGACGGCCGCGCTGACGAGCAAGAAGTCGGCTCTCCCCAAGCC
CACGCTCACTGCGCCGTCACCGAGTCGAATGGGCGCCGCCACACCCACCC
CTGCTGCGCGTAAGCCGGTCAAGCCGGCGCCGTCACCCATTCCCAACCGT
CCGCGCTGGACCAACAGCACCAACACGAACGATTTGTATGTCGGCCACGT
GTATAAACCCAATCCTACTCCCCGCAAGGCTTCTGCGCCTGGCCGCACTT
CGCGGCCCTCGTCGACCATACCTATGGGACCGTTCCGGCGCGACATGTCG
GTCTCTCCGGCACCGATGACGGCGCGCTCTATGAGTCGTGTTTCAAGCCG
GCTGACGAATCGCAGCCCAGAGCGCATGGGCTCTCCTACACCTAATCGAA
CTATCCTCGATCCCCCTCCTTACAGCAAGCTCCGGCGGCCAGACGGCATG
TCGAACGCGCCGCGCAGCCGACAGAGCTTTGCGGGGCTGTCGTTCAGCCG
CAGTGTGTCGCACGACCACGAACGAAACCTTGCCAGTCCAACGAAGACAC
CGCGGCCAGGCACCGCGCTGGGGCATTCCGCGAACCGGCGGATCAGCTTG
ATCCCATTGCCGAAGAACAACCCGACGCCTCGCAGCAAGCTCGGAGAGCG
GCCGCCATGGCGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013889 |
| DBxref | PFAM:PF08580 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2732713..2735928 - |
|
