|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2744046..2746141+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002503-T1 ID=KJC3_002503-T1|Name=KJC3_002503-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2096bp|location=Sequence derived from alignment at ch2:2744046..2746141+ (Aspergillus niger KJC3)
TGAGGGGTTGCACTGCGCAATGCTAGTGCTAAGATGCCTCTTTCAGGACT
CTCGTGGCTTCGGAGATTATACTCCCTTGATACTCTAGATACTCGTCTTA
CTACCTCTTCTACTACTCCGCCCAAAGCTGCCGCGGGTCACACGCGAGCT
CCCTCCGCCAGAGATGCCCGTGCCATTGCGATTGCGCGCAATGCTCCCCC
TCCAAAATGGAGGACCTTTGAGTTTTACATCTATTATGTGATTTTCTTGA
TTGCTGTGCCGTTGATGTTCATCACGGCCATTGGGGTATCGCAGGGTAAG
CCCGAACCACTTTTCTGTTGCAAGAGAGCAGCTACGCTGACTTGTTGATG
TAGAAAGCCATCCTTCATATCCGACTTACGCTCATCTGCTGTCGCCTGGC
TGGATACCTGGACGTCAAGTTGTAAGTAGCTCGTTCAATCGTTTTAGGTC
AGACGCTGACTTCTTTGTTCTGCTAGGACAACTCCGATGACCAGTATTCC
TCGTTCCGCGATAACATACCCTACCTGTTGCTGCTGCTTGTCGGACACCC
ATTGCTTCGCCGTGTATATAACAGCTATGTACGCCCAGTCACTGGAGATA
CCGGGGCCTCTAAGGCTTCCCCGACTGTTCTTGCTGCGGATGCTCGTCTT
AATCAGCGGATAAGCTTCGACTTTTATTTCGCGCTTGTCTTCATCACAGC
TCTTCACGGTGTTTCCGCGCTGAAGGTCCTCGCCATCCTATATGTGAACT
ACAAAATCTCCAAGAATCTTCCCAGGAAGTACATTCCTGCGGCGACCTGG
ATGTTCAATATCGGAACGCTGCTTGCAAATGAGCTCTGTGCCGGTTACCA
TCTGGAATGGATGGCTTCTTTCTTCGTGTCTCCGGGTAGTACTGACAAGG
AAGCCCCCTTGGTACTTTGGGGTCGCTACCTTGATGGCTTTGGGGGTATC
ATGCCTCGATGGGAGATCCTCTTCAACATCACGATCCTTCGGTTGATTAG
TTTCAACATGGATTACTATTGGAGCCTCGACTACCCCGCTGCCAGTCCCA
TTGAAGTAAGTTTATTTCCTTCTCGGTACGGAATCCAATCTGACAGACAT
AAGAAGAAACAGGTCGATCCTGCAGCACTGTCAGAGCGTGACCGTGTCAG
TATCCCCGCGGAACCAGCTGCGTTCAATGGGCGTTATTACCTTGCCTATG
TTCTCTATGCTCCGCTTTACTTGACAGGCCCTATCTTGACCTTCAACGAC
TACATTTCCCAACAAAGATATGCACCTCCATCTCTCACGAGAACTAGGAC
AGTCCTCTATGGCATTCGCTTCTTCTTGACACTTCTCGCCATGGAGCTAA
TACTACATTTCATCTACGCCGTGGCTATCTCGAAAGCTTCCCCCGACTGG
TCCTCGTACACAGCCGGCCAACTCAGCATGCTGGCATACTTCAATCTGCA
TATTATCTGGCTCAAACTTTTGATTCCATGGCGGTTCTTCCGTTTCTGGG
CATTAGTCGACGGGATTGATCCGACCGAGAACATGATACGCTGCGTTTCA
AACAATTACTCTCCCTCCTCCTTCTGGCGCGCATGGCACCGCTCTTTCAA
CCGTTGGATTGTGCGCTATCTCTACGTGCCTCTGGGTGGAGGCAGCAGGG
GAGGTTCCGACCGCGGCAAATCTTCCGGTCTCTACGCCAAGGCCCGTCAG
ATCTTCAACACGCTTATTGTCTTCACCTTCGTTGCTCTCTGGCATGACAT
CAACCCTCGTCTTCTCATGTGGGGCTGGCTTATAACCCTCTTCGTTCTGC
CCGAAGTCATCGGCAGACTACTGTTCCCTGCCAGCCGATGGCGTTCTCAT
CCTACAGCGTACCGCGTCCTTTGCGGAGTGGGAGCTGTTGGCAACGTTCT
AATGATGATGATCGCGAACCTGGTTGGATTCGCTTTAGGATTGGATGGTT
TGGAAGGCCTTCTGGCTGGAATATTGGGATCCTGGGCCGGCATCATCTAC
CTCATCTCAGCGTGCTGTGCTCTTTTTGTTGGAGTGCAGGTCATGTTTGA
GATTCGTGAAGAGGAAGCACGGGCTGGTATTGACTTGAAGTATTGA back to topCoding sequence (CDS) from alignment at ch2:2744046..2746141+ >KJC3_002503-T1 ID=KJC3_002503-T1|Name=KJC3_002503-T1|organism=Aspergillus niger KJC3|type=CDS|length=7608bp|location=Sequence derived from alignment at ch2:2744046..2746141+ (Aspergillus niger KJC3)
ATGCCTCTTTCAGGACTCTCGTGGCTTCGGAGATTATACTCCCTTGATAC
TCTAGATACTCGTCTTACTACCTCTTCTACTACTCCGCCCAAAGCTGCCG
CGGGTCACACGCGAGCTCCCTCCGCCAGAGATGCCCGTGCCATTGCGATT
GCGCGCAATGCTCCCCCTCCAAAATGGAGGACCTTTGAGTTTTACATCTA
TTATGTGATTTTCTTGATTGCTGTGCCGTTGATGTTCATCACGGCCATTG
GGGTATCGCAGGAAAGCCATCCTTCATATCCGACTTACGCTCATCTGCTG
TCGCCTGGCTGGATACCTGGACGTCAAGTTGACAACTCCGATGACCAGTA
TTCCTCGTTCCGCGATAACATACCCTACCTGTTGCTGCTGCTTGTCGGAC
ACCCATTGCTTCGCCGTGTATATAACAGCTATGTACGCCCAGTCACTGGA
GATACCGGGGCCTCTAAGGCTTCCCCGACTGTTCTTGCTGCGGATGCTCG
TCTTAATCAGCGGATAAGCTTCGACTTTTATTTCGCGCTTGTCTTCATCA
CAGCTCTTCACGGTGTTTCCGCGCTGAAGGTCCTCGCCATCCTATATGTG
AACTACAAAATCTCCAAGAATCTTCCCAGGAAGTACATTCCTGCGGCGAC
CTGGATGTTCAATATCGGAACGCTGCTTGCAAATGAGCTCTGTGCCGGTT
ACCATCTGGAATGGATGGCTTCTTTCTTCGTGTCTCCGGGTAGTACTGAC
AAGGAAGCCCCCTTGGTACTTTGGGGTCGCTACCTTGATGGCTTTGGGGG
TATCATGCCTCGATGGGAGATCCTCTTCAACATCACGATCCTTCGGTTGA
TTAGTTTCAACATGGATTACTATTGGAGCCTCGACTACCCCGCTGCCAGT
CCCATTGAAAAGAAACAGGTCGATCCTGCAGCACTGTCAGAGCGTGACCG
TGTCAGTATCCCCGCGGAACCAGCTGCGTTCAATGGGCGTTATTACCTTG
CCTATGTTCTCTATGCTCCGCTTTACTTGACAGGCCCTATCTTGACCTTC
AACGACTACATTTCCCAACAAAGATATGCACCTCCATCTCTCACGAGAAC
TAGGACAGTCCTCTATGGCATTCGCTTCTTCTTGACACTTCTCGCCATGG
AGCTAATACTACATTTCATCTACGCCGTGGCTATCTCGAAAGCTTCCCCC
GACTGGTCCTCGTACACAGCCGGCCAACTCAGCATGCTGGCATACTTCAA
TCTGCATATTATCTGGCTCAAACTTTTGATTCCATGGCGGTTCTTCCGTT
TCTGGGCATTAGTCGACGGGATTGATCCGACCGAGAACATGATACGCTGC
GTTTCAAACAATTACTCTCCCTCCTCCTTCTGGCGCGCATGGCACCGCTC
TTTCAACCGTTGGATTGTGCGCTATCTCTACGTGCCTCTGGGTGGAGGCA
GCAGGGGAGGTTCCGACCGCGGCAAATCTTCCGGTCTCTACGCCAAGGCC
CGTCAGATCTTCAACACGCTTATTGTCTTCACCTTCGTTGCTCTCTGGCA
TGACATCAACCCTCGTCTTCTCATGTGGGGCTGGCTTATAACCCTCTTCG
TTCTGCCCGAAGTCATCGGCAGACTACTGTTCCCTGCCAGCCGATGGCGT
TCTCATCCTACAGCGTACCGCGTCCTTTGCGGAGTGGGAGCTGTTGGCAA
CGTTCTAATGATGATGATCGCGAACCTGGTTGGATTCGCTTTAGGATTGG
ATGGTTTGGAAGGCCTTCTGGCTGGAATATTGGGATCCTGGGCCGGCATC
ATCTACCTCATCTCAGCGTGCTGTGCTCTTTTTGTTGGAGTGCAGGTCAT
GTTTGAGATTCGTGAAGAGGAAGCACGGGCTGGTATTGACTTGAAGTATT
GAATGCCTCTTTCAGGACTCTCGTGGCTTCGGAGATTATACTCCCTTGAT
ACTCTAGATACTCGTCTTACTACCTCTTCTACTACTCCGCCCAAAGCTGC
CGCGGGTCACACGCGAGCTCCCTCCGCCAGAGATGCCCGTGCCATTGCGA
TTGCGCGCAATGCTCCCCCTCCAAAATGGAGGACCTTTGAGTTTTACATC
TATTATGTGATTTTCTTGATTGCTGTGCCGTTGATGTTCATCACGGCCAT
TGGGGTATCGCAGGAAAGCCATCCTTCATATCCGACTTACGCTCATCTGC
TGTCGCCTGGCTGGATACCTGGACGTCAAGTTGACAACTCCGATGACCAG
TATTCCTCGTTCCGCGATAACATACCCTACCTGTTGCTGCTGCTTGTCGG
ACACCCATTGCTTCGCCGTGTATATAACAGCTATGTACGCCCAGTCACTG
GAGATACCGGGGCCTCTAAGGCTTCCCCGACTGTTCTTGCTGCGGATGCT
CGTCTTAATCAGCGGATAAGCTTCGACTTTTATTTCGCGCTTGTCTTCAT
CACAGCTCTTCACGGTGTTTCCGCGCTGAAGGTCCTCGCCATCCTATATG
TGAACTACAAAATCTCCAAGAATCTTCCCAGGAAGTACATTCCTGCGGCG
ACCTGGATGTTCAATATCGGAACGCTGCTTGCAAATGAGCTCTGTGCCGG
TTACCATCTGGAATGGATGGCTTCTTTCTTCGTGTCTCCGGGTAGTACTG
ACAAGGAAGCCCCCTTGGTACTTTGGGGTCGCTACCTTGATGGCTTTGGG
GGTATCATGCCTCGATGGGAGATCCTCTTCAACATCACGATCCTTCGGTT
GATTAGTTTCAACATGGATTACTATTGGAGCCTCGACTACCCCGCTGCCA
GTCCCATTGAAAAGAAACAGGTCGATCCTGCAGCACTGTCAGAGCGTGAC
CGTGTCAGTATCCCCGCGGAACCAGCTGCGTTCAATGGGCGTTATTACCT
TGCCTATGTTCTCTATGCTCCGCTTTACTTGACAGGCCCTATCTTGACCT
TCAACGACTACATTTCCCAACAAAGATATGCACCTCCATCTCTCACGAGA
ACTAGGACAGTCCTCTATGGCATTCGCTTCTTCTTGACACTTCTCGCCAT
GGAGCTAATACTACATTTCATCTACGCCGTGGCTATCTCGAAAGCTTCCC
CCGACTGGTCCTCGTACACAGCCGGCCAACTCAGCATGCTGGCATACTTC
AATCTGCATATTATCTGGCTCAAACTTTTGATTCCATGGCGGTTCTTCCG
TTTCTGGGCATTAGTCGACGGGATTGATCCGACCGAGAACATGATACGCT
GCGTTTCAAACAATTACTCTCCCTCCTCCTTCTGGCGCGCATGGCACCGC
TCTTTCAACCGTTGGATTGTGCGCTATCTCTACGTGCCTCTGGGTGGAGG
CAGCAGGGGAGGTTCCGACCGCGGCAAATCTTCCGGTCTCTACGCCAAGG
CCCGTCAGATCTTCAACACGCTTATTGTCTTCACCTTCGTTGCTCTCTGG
CATGACATCAACCCTCGTCTTCTCATGTGGGGCTGGCTTATAACCCTCTT
CGTTCTGCCCGAAGTCATCGGCAGACTACTGTTCCCTGCCAGCCGATGGC
GTTCTCATCCTACAGCGTACCGCGTCCTTTGCGGAGTGGGAGCTGTTGGC
AACGTTCTAATGATGATGATCGCGAACCTGGTTGGATTCGCTTTAGGATT
GGATGGTTTGGAAGGCCTTCTGGCTGGAATATTGGGATCCTGGGCCGGCA
TCATCTACCTCATCTCAGCGTGCTGTGCTCTTTTTGTTGGAGTGCAGGTC
ATGTTTGAGATTCGTGAAGAGGAAGCACGGGCTGGTATTGACTTGAAGTA
TTGAATGCCTCTTTCAGGACTCTCGTGGCTTCGGAGATTATACTCCCTTG
ATACTCTAGATACTCGTCTTACTACCTCTTCTACTACTCCGCCCAAAGCT
GCCGCGGGTCACACGCGAGCTCCCTCCGCCAGAGATGCCCGTGCCATTGC
GATTGCGCGCAATGCTCCCCCTCCAAAATGGAGGACCTTTGAGTTTTACA
TCTATTATGTGATTTTCTTGATTGCTGTGCCGTTGATGTTCATCACGGCC
ATTGGGGTATCGCAGGAAAGCCATCCTTCATATCCGACTTACGCTCATCT
GCTGTCGCCTGGCTGGATACCTGGACGTCAAGTTGACAACTCCGATGACC
AGTATTCCTCGTTCCGCGATAACATACCCTACCTGTTGCTGCTGCTTGTC
GGACACCCATTGCTTCGCCGTGTATATAACAGCTATGTACGCCCAGTCAC
TGGAGATACCGGGGCCTCTAAGGCTTCCCCGACTGTTCTTGCTGCGGATG
CTCGTCTTAATCAGCGGATAAGCTTCGACTTTTATTTCGCGCTTGTCTTC
ATCACAGCTCTTCACGGTGTTTCCGCGCTGAAGGTCCTCGCCATCCTATA
TGTGAACTACAAAATCTCCAAGAATCTTCCCAGGAAGTACATTCCTGCGG
CGACCTGGATGTTCAATATCGGAACGCTGCTTGCAAATGAGCTCTGTGCC
GGTTACCATCTGGAATGGATGGCTTCTTTCTTCGTGTCTCCGGGTAGTAC
TGACAAGGAAGCCCCCTTGGTACTTTGGGGTCGCTACCTTGATGGCTTTG
GGGGTATCATGCCTCGATGGGAGATCCTCTTCAACATCACGATCCTTCGG
TTGATTAGTTTCAACATGGATTACTATTGGAGCCTCGACTACCCCGCTGC
CAGTCCCATTGAAAAGAAACAGGTCGATCCTGCAGCACTGTCAGAGCGTG
ACCGTGTCAGTATCCCCGCGGAACCAGCTGCGTTCAATGGGCGTTATTAC
CTTGCCTATGTTCTCTATGCTCCGCTTTACTTGACAGGCCCTATCTTGAC
CTTCAACGACTACATTTCCCAACAAAGATATGCACCTCCATCTCTCACGA
GAACTAGGACAGTCCTCTATGGCATTCGCTTCTTCTTGACACTTCTCGCC
ATGGAGCTAATACTACATTTCATCTACGCCGTGGCTATCTCGAAAGCTTC
CCCCGACTGGTCCTCGTACACAGCCGGCCAACTCAGCATGCTGGCATACT
TCAATCTGCATATTATCTGGCTCAAACTTTTGATTCCATGGCGGTTCTTC
CGTTTCTGGGCATTAGTCGACGGGATTGATCCGACCGAGAACATGATACG
CTGCGTTTCAAACAATTACTCTCCCTCCTCCTTCTGGCGCGCATGGCACC
GCTCTTTCAACCGTTGGATTGTGCGCTATCTCTACGTGCCTCTGGGTGGA
GGCAGCAGGGGAGGTTCCGACCGCGGCAAATCTTCCGGTCTCTACGCCAA
GGCCCGTCAGATCTTCAACACGCTTATTGTCTTCACCTTCGTTGCTCTCT
GGCATGACATCAACCCTCGTCTTCTCATGTGGGGCTGGCTTATAACCCTC
TTCGTTCTGCCCGAAGTCATCGGCAGACTACTGTTCCCTGCCAGCCGATG
GCGTTCTCATCCTACAGCGTACCGCGTCCTTTGCGGAGTGGGAGCTGTTG
GCAACGTTCTAATGATGATGATCGCGAACCTGGTTGGATTCGCTTTAGGA
TTGGATGGTTTGGAAGGCCTTCTGGCTGGAATATTGGGATCCTGGGCCGG
CATCATCTACCTCATCTCAGCGTGCTGTGCTCTTTTTGTTGGAGTGCAGG
TCATGTTTGAGATTCGTGAAGAGGAAGCACGGGCTGGTATTGACTTGAAG
TATTGAATGCCTCTTTCAGGACTCTCGTGGCTTCGGAGATTATACTCCCT
TGATACTCTAGATACTCGTCTTACTACCTCTTCTACTACTCCGCCCAAAG
CTGCCGCGGGTCACACGCGAGCTCCCTCCGCCAGAGATGCCCGTGCCATT
GCGATTGCGCGCAATGCTCCCCCTCCAAAATGGAGGACCTTTGAGTTTTA
CATCTATTATGTGATTTTCTTGATTGCTGTGCCGTTGATGTTCATCACGG
CCATTGGGGTATCGCAGGAAAGCCATCCTTCATATCCGACTTACGCTCAT
CTGCTGTCGCCTGGCTGGATACCTGGACGTCAAGTTGACAACTCCGATGA
CCAGTATTCCTCGTTCCGCGATAACATACCCTACCTGTTGCTGCTGCTTG
TCGGACACCCATTGCTTCGCCGTGTATATAACAGCTATGTACGCCCAGTC
ACTGGAGATACCGGGGCCTCTAAGGCTTCCCCGACTGTTCTTGCTGCGGA
TGCTCGTCTTAATCAGCGGATAAGCTTCGACTTTTATTTCGCGCTTGTCT
TCATCACAGCTCTTCACGGTGTTTCCGCGCTGAAGGTCCTCGCCATCCTA
TATGTGAACTACAAAATCTCCAAGAATCTTCCCAGGAAGTACATTCCTGC
GGCGACCTGGATGTTCAATATCGGAACGCTGCTTGCAAATGAGCTCTGTG
CCGGTTACCATCTGGAATGGATGGCTTCTTTCTTCGTGTCTCCGGGTAGT
ACTGACAAGGAAGCCCCCTTGGTACTTTGGGGTCGCTACCTTGATGGCTT
TGGGGGTATCATGCCTCGATGGGAGATCCTCTTCAACATCACGATCCTTC
GGTTGATTAGTTTCAACATGGATTACTATTGGAGCCTCGACTACCCCGCT
GCCAGTCCCATTGAAAAGAAACAGGTCGATCCTGCAGCACTGTCAGAGCG
TGACCGTGTCAGTATCCCCGCGGAACCAGCTGCGTTCAATGGGCGTTATT
ACCTTGCCTATGTTCTCTATGCTCCGCTTTACTTGACAGGCCCTATCTTG
ACCTTCAACGACTACATTTCCCAACAAAGATATGCACCTCCATCTCTCAC
GAGAACTAGGACAGTCCTCTATGGCATTCGCTTCTTCTTGACACTTCTCG
CCATGGAGCTAATACTACATTTCATCTACGCCGTGGCTATCTCGAAAGCT
TCCCCCGACTGGTCCTCGTACACAGCCGGCCAACTCAGCATGCTGGCATA
CTTCAATCTGCATATTATCTGGCTCAAACTTTTGATTCCATGGCGGTTCT
TCCGTTTCTGGGCATTAGTCGACGGGATTGATCCGACCGAGAACATGATA
CGCTGCGTTTCAAACAATTACTCTCCCTCCTCCTTCTGGCGCGCATGGCA
CCGCTCTTTCAACCGTTGGATTGTGCGCTATCTCTACGTGCCTCTGGGTG
GAGGCAGCAGGGGAGGTTCCGACCGCGGCAAATCTTCCGGTCTCTACGCC
AAGGCCCGTCAGATCTTCAACACGCTTATTGTCTTCACCTTCGTTGCTCT
CTGGCATGACATCAACCCTCGTCTTCTCATGTGGGGCTGGCTTATAACCC
TCTTCGTTCTGCCCGAAGTCATCGGCAGACTACTGTTCCCTGCCAGCCGA
TGGCGTTCTCATCCTACAGCGTACCGCGTCCTTTGCGGAGTGGGAGCTGT
TGGCAACGTTCTAATGATGATGATCGCGAACCTGGTTGGATTCGCTTTAG
GATTGGATGGTTTGGAAGGCCTTCTGGCTGGAATATTGGGATCCTGGGCC
GGCATCATCTACCTCATCTCAGCGTGCTGTGCTCTTTTTGTTGGAGTGCA
GGTCATGTTTGAGATTCGTGAAGAGGAAGCACGGGCTGGTATTGACTTGA
AGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002503-T1.utr5p1 | KJC3_002503-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926235L |
| DBxref | InterPro:IPR004299 |
| DBxref | PFAM:PF03062 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2744046..2746141 + |
|
