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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2759771..2761880+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002509-T1 ID=KJC3_002509-T1|Name=KJC3_002509-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2110bp|location=Sequence derived from alignment at ch2:2759771..2761880+ (Aspergillus niger KJC3)
AAAAAAAGTCGTATTAGTTCTCCACCTTTTCTTATGCAGTTTCACGCTTC
GGAGATAACCGCACCTATCATTCGCTCCCTGCACAACCTACTCCCTTAGT
TGCCCCATAACGCTTTTCTAATTGACTGGCACTGTCAGACCCAGTCTCGG
AAATCCTCGCAGCAGACCGACGGCCCTCCTCCATACAGCAAGTCCAGCCG
GTACTGTATTCTGAGTCACGCTCATCAACCCGAATACCTGCAACCACTAC
AGGAATTACTATAAGATCTTCAACGAGACAACGTTCTTACTAGTATAAGA
CTGGAGCTGGATATTGTGCAAGCAATCAGACAAACAAGTCCGTCACTTCT
ATCTTTGTTGTATACCAAATTCAGTCATTGACTGACTCTAAGGCGACACC
TCACGCAATGGACCTAAGAGATATCAAGAAGACCTCCCAAGAGCAGGGCC
AATTACATCAGAAGCTATGGGAGCTTAACCAGACATACACCCCCGGAAAC
GTGTTGCCTAGTGCCAGTAACTTGTCAAGAGCCAGAGCATCTCTACCTAA
GGCTCTCCCTGCCGAAGGAGCAGGATTCGAAAGTGCCACCCACCATATCC
TGAATGACTTGGTCCCAGCCTTCAATCGCAGCAGCATAAGTCCCAACTAT
TACGGATTTGTCACTGGAGGCGTTACCCCGGTCGCCCTATTTGCAGACAA
TCTCGTCACAGCTTATGATCAGAATGTTCAAGTGCACCTTGCGGATCATT
CTATATCGACAGACGTCGAAGCTACGGCTCTGAGTCTTCTTGCAGATCTT
TTGGAACTGGATCGGCACCGCTGGAGCAATGGAACGTTTACTACTGGGGC
CACAGCCAGCAATGTTCATGGATTGGCTTGCGGGAGGGAGTTTGTCCTTC
GAGCTGCTGCCAAAAAGAGGGGAATTTCTATTGAAAGCGTCGGTGAGGAT
GGCTTGTTCGAACTAATCCAAGCCACAGGCCTCTCTGGTATCCAAATTCT
CTCGACGATGCCTCACTCTTCGTTGGCAAAGGCGGCCGGAATCCTCGGCA
TTGGCCGTGCCAACGTCAAGAGCATTTGTCGGGACAATCACTACCTCAGA
GTCGACTTGGTACGACTTGAAGCGGAACTGAAAACCAATAAGGCGAGCAT
CGTCGCTGTCTCCTGTGGAGAGGTCAATACTGGACACTTTGCGACATCAA
GCTTGGCTGAAATGGAAAGCCTACGTAGCCTCTGCGATAAGTACGGAGCT
TGGCTTCACGTCGATGGTGCCTTTGGGATTTTTGGCCGGATCCTCAAAGA
TGCTGAATTCTCTGCTATATCAAAGGGGTGCGAAGGCATGGAGCTAGCAG
ATTCAATCGCAGGTGACGCTCACAAATTTCTAAACGTGCCATACGATTGT
GGCTTTGTCCTTTGTCGCCATCCCAGTGAGGCTGAGAAGGTTTTCCAAAA
CGCGAATGCGGCTTACTTGTCTGGGGGGCAGTCTGGAGCCGCCTCAATAC
CTTCTCCACTAAACATCGGTATGGAGAATTCGAGACGGTTCAGAGCGTTG
CCGGTGTACGCCTCCCTCGTGGCATATGGCCAAGTTGGGTATCAGAAAAT
GCTACGGAAGCAAGTTCGGCTTAGTCGAATGATTGCAGGGTGGATTTACG
ATCATCCCAAGTACAATGCTTTGCCAGAGTTGGCAAACAAGGATGAGTTG
CTAAACCAGACCTACATCATAGTGCTCTTCAGTGCAAAGGATGACGAGCT
GAACAACAGCCTCACCAAGGAGATTAATGCGACTTCTAAGCTTTTTGTGT
CTGGAACCTCTTGGCAAGGAAGACCGGCTTGCCGGATCGCAATTTCAAAC
TGGAGGGTGGAAGAAGAAAGGGATTTTGCACTTGTGACAGATGTCCTGGA
CAATGTAGCTGGAAAACTATAGAATGATCAAATGCCTGCTACGATACACC
ATGTTTGGTACGTTTGATGTATAGTCGGGTTTTAATATCATGCAAATGCT
TGCACTTAAAGGTTGGGGTTGTTCTACTTATGGCTCTTACAAACGAGAGG
CATTCACATTGCATGAGCTCTAGATAAACATTTAGCTTTAATAGGGATCA
CTTAGTACCA back to topCoding sequence (CDS) from alignment at ch2:2759771..2761880+ >KJC3_002509-T1 ID=KJC3_002509-T1|Name=KJC3_002509-T1|organism=Aspergillus niger KJC3|type=CDS|length=1515bp|location=Sequence derived from alignment at ch2:2759771..2761880+ (Aspergillus niger KJC3)
ATGGACCTAAGAGATATCAAGAAGACCTCCCAAGAGCAGGGCCAATTACA
TCAGAAGCTATGGGAGCTTAACCAGACATACACCCCCGGAAACGTGTTGC
CTAGTGCCAGTAACTTGTCAAGAGCCAGAGCATCTCTACCTAAGGCTCTC
CCTGCCGAAGGAGCAGGATTCGAAAGTGCCACCCACCATATCCTGAATGA
CTTGGTCCCAGCCTTCAATCGCAGCAGCATAAGTCCCAACTATTACGGAT
TTGTCACTGGAGGCGTTACCCCGGTCGCCCTATTTGCAGACAATCTCGTC
ACAGCTTATGATCAGAATGTTCAAGTGCACCTTGCGGATCATTCTATATC
GACAGACGTCGAAGCTACGGCTCTGAGTCTTCTTGCAGATCTTTTGGAAC
TGGATCGGCACCGCTGGAGCAATGGAACGTTTACTACTGGGGCCACAGCC
AGCAATGTTCATGGATTGGCTTGCGGGAGGGAGTTTGTCCTTCGAGCTGC
TGCCAAAAAGAGGGGAATTTCTATTGAAAGCGTCGGTGAGGATGGCTTGT
TCGAACTAATCCAAGCCACAGGCCTCTCTGGTATCCAAATTCTCTCGACG
ATGCCTCACTCTTCGTTGGCAAAGGCGGCCGGAATCCTCGGCATTGGCCG
TGCCAACGTCAAGAGCATTTGTCGGGACAATCACTACCTCAGAGTCGACT
TGGTACGACTTGAAGCGGAACTGAAAACCAATAAGGCGAGCATCGTCGCT
GTCTCCTGTGGAGAGGTCAATACTGGACACTTTGCGACATCAAGCTTGGC
TGAAATGGAAAGCCTACGTAGCCTCTGCGATAAGTACGGAGCTTGGCTTC
ACGTCGATGGTGCCTTTGGGATTTTTGGCCGGATCCTCAAAGATGCTGAA
TTCTCTGCTATATCAAAGGGGTGCGAAGGCATGGAGCTAGCAGATTCAAT
CGCAGGTGACGCTCACAAATTTCTAAACGTGCCATACGATTGTGGCTTTG
TCCTTTGTCGCCATCCCAGTGAGGCTGAGAAGGTTTTCCAAAACGCGAAT
GCGGCTTACTTGTCTGGGGGGCAGTCTGGAGCCGCCTCAATACCTTCTCC
ACTAAACATCGGTATGGAGAATTCGAGACGGTTCAGAGCGTTGCCGGTGT
ACGCCTCCCTCGTGGCATATGGCCAAGTTGGGTATCAGAAAATGCTACGG
AAGCAAGTTCGGCTTAGTCGAATGATTGCAGGGTGGATTTACGATCATCC
CAAGTACAATGCTTTGCCAGAGTTGGCAAACAAGGATGAGTTGCTAAACC
AGACCTACATCATAGTGCTCTTCAGTGCAAAGGATGACGAGCTGAACAAC
AGCCTCACCAAGGAGATTAATGCGACTTCTAAGCTTTTTGTGTCTGGAAC
CTCTTGGCAAGGAAGACCGGCTTGCCGGATCGCAATTTCAAACTGGAGGG
TGGAAGAAGAAAGGGATTTTGCACTTGTGACAGATGTCCTGGACAATGTA
GCTGGAAAACTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016831 | carboxy-lyase activity |
| GO:0030170 | pyridoxal phosphate binding |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002509-T1.utr5p1 | KJC3_002509-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002509-T1.utr3p1 | KJC3_002509-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR002129 |
| DBxref | InterPro:IPR015421 |
| DBxref | PFAM:PF00282 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2759771..2761880 + |
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