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KJC3_002510-T1, KJC3_002510-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002510-T1
Unique NameKJC3_002510-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2762056..2765083+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002510-T1 ID=KJC3_002510-T1|Name=KJC3_002510-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3028bp|location=Sequence derived from alignment at ch2:2762056..2765083+ (Aspergillus niger KJC3)
GCCAGGTGCCGTAATGGAAAGGCTTCTTTTGCATCGTCATAATGGTATAT
CGTGGGAAGCCTTCTAAGTCATGCCGCGAATGCCGCAAACGTGATATCAA
AGTATGATGTTTTCTTCTACTTCTTCACCTTGACGACTGAACCAGGCTTA
CACCTCTCGATAGTGCGATAAAAAGGAAGATGGCTGCTCCCAATGTGTCC
GCGCTGGTCTGAAGTGCTCGGGATACCAAAAGTTAACAGATATAGTCATA
CTTAATGAGACCTCTGCTACGGCAGAAAAAGTACTGAAGAAGCACTCTTT
AGAAGGTCCAGCTTCTGCAGGGCCTCTATCAACAAATCTTCTTCCGACTG
TTTTACAACGCGCAAAGCACCTATATATCTCGCAATACGTTCAAGACACA
CCTGCAACGGGTATGTACTCGTATATGCAGGTCTTCTACCCGTCCAAATC
AGACGACTATCCTCTTCTCGAGACCATGATTCATGCGCTTTTCATGGCCA
CGTTCTCGTCTCTTCAGGGATGGCCCCCAGCTCTCTATCATGCTCGAAAC
AACTATGGATCAGCTTTGTCATTGACTCGAAAGGCGATCCGGTCACCAAA
AGAGGCTTTGTTGGATAGAACCTTATTCGCGGTGTTGCTCATGAGCATAT
TTGAACGGCTCGCCAACGTAGAACAAGGAGCGCTATGTATTCGCAACGGA
CATTTGAAAGGTGCGTTTGAGCTTATGGCCTTGAGGGGTAATAGTCAATT
TACAGACGGAGGGGGCGTTGCGATGTTTTTGCATCTAACTGAGCTTGTGG
TTCTTGATTGCCTTGCCAATGAAGTTGATATCCCTTCCCGGTTTTTGGCA
TTGCGACAACAAGCTCTTGAAGCCGGTGCGGACACATCGTCACTAAGGTG
GAGATTCTTGGAAATCATGATGCGGTATGCACAGCTGGAGTACACCGCGA
AATCTTCCACTTCCGCAGAAGACGTGGTTTATCAAGCCAAAGCACTTGAC
GCAGAACTTGATCGACTGTCCAAGCACCTGCCTTGTTTCTTCTCGAGAAA
GCAGAGTCCTGAACCCCCAAGCATCCCGCCAACCAAGCCGGACATATATC
CCGATTACAATACACAAAGATGCTGGAACAACATCCGTGTTCTTCGCATT
CAGCTAATGAAGTTTATATGTGATCAATGTGCTCAGGCCTTGGGAGATTT
AGCCGATGACACCTGGATCATGGCCGAAGTTCATGACTCTAACCGGCGAG
CAAACTTCCTTGCTACAGACATATGCCTTTCCATACCTGGTAAGGGCGCC
CACAGCATGCTTCTATATGAGGTCTCCAATGTCCAATCAGCTACACTCTT
GTTTCATCTACATGTGGCCAAAGAGGTTCTTCCAAAGCTCGCTCAATCGA
GGCTATCCATTCAGGAGCGATTACAATTCGTGAAAGTGAAGCAATCTCCC
TCACAGCAGAGAACATTGGATTGTTTGCTTCATAATGATTATCAAATGCC
GCGGAATATCTGGAAGATGTGGCTTCTCATTGGGAGAGAGGATTTCTCGA
TCTGATTTCGGAGCTGTGCAAATGCGTTCCACCTGCATTTTCCCAGCCTA
GTACTCGTTCAACTTCATAGCCGCAGGCGGAAATCTCTCCCCTGCGGTTG
GGTATTTCTCCTGGAGGATCTCAATCTTTGCAAGATCATCGTCACTTAAA
TCGACATCCTTCAAATTTTCGAAAACCCTGGCTTCAGATCTTGCACCCGC
AACCGGGACAAAAAGCGGCAATTCAGGCTTTCTGCTCTGCATTTTAATCC
ATGACAAAGCTAACTGAGCCGGAGTGCACCCCTTCGCAGCCGCAATTTTC
TCTAGCTCATCAACAAGCAGGCGGTTCTTCGCAAGGTTATCCGGCTGGAA
TCGAGGGAAAAGCCGATGATGATCGTGCGCCGCCAAGTCATCAGGGCTTT
TTATCGTGCCAGTCAACATCCCCGCTCCCAGCGGTGTATGGGCTATTATG
GGAATACCAAGCTCCGCGCACGTCTCTGCGACACCATTGCGGAAAACATC
CGTAGCCCAAAGGCTGACTTCGGCCTCTAGCATATCAATCTTCGCAACGC
TCGCCGCACGACGAATAGTCTCAGCTTTTACCTCCGACAGCTGGATACCC
CCGATCTTACCCTCTTCTTTCAGCTCAGCCAGCGCCTTGATGCTTTCTTC
AACCGGGACATTGGGATCAACCCTCGCGCAGCCGAAAATGTCGATCTTTT
TCTTGCCGTCCAGGATCTTGAGAGCGTTGTCCACGAAGCCGCGAAGTCCC
GCGGGTGAGCAGTCCATAGTGAAGGTCTTCATGCTCACAACGCCTGACTT
GATCGAAAGGACTACCTTGTCCGCGTCTTCAGGATAAGCTGTGAAGTAGC
GGTTCATGAGGTGCAATGAGTTGCTGTCGGGCGTCCCGTAGAAGTCTGCT
CCGTTCCATACGTTGACGCCGGCTGCCAGCGCTGCCTTGAGGACTCTGAA
TGCTTGTTCATCTGGCGTCACGTCGTTTGGCAGGGTGAAACCTGCGATAT
GTTTCTATCAATATACGAACTTTTACAATGACAGCTCGAGTGGCAGACAA
GCCTCCGGACTAATAATACAGAAACCAAAGAAAAAGGAAACGAGGGAAAA
CTCACGCATGAGCCCCAACCCGTTCTGAGTGATTTTCTTCCCAGCGAGGA
ACGGCATCGTCGGTAATTATAATTGATACTATATGCGCAGTGATCAGAGA
TATGGAGCAGATGAGGAGTATGATAACAAAAAAGGCCGCACTTTGATGGA
AGTATATCTCAGCTACCCTGCTGTCCCTGGTGCTATTGCAACAACATAAA
CCCCTCACCATTGCAGAATAACCACTCCTTATATACTTCCAATTTTCAGC
CGCCAATTTCTTCGACTTCCGGAGATAAACTGCTTCAGGTCCCTCCATCC
CCGGCGATTACGAGTAAAGTCCGGGAGTATGCCGTCATGACCAGCTGGTT
ACCTGATTAGGTTTAGTGCCATATAAAG
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Coding sequence (CDS) from alignment at ch2:2762056..2765083+

>KJC3_002510-T1 ID=KJC3_002510-T1|Name=KJC3_002510-T1|organism=Aspergillus niger KJC3|type=CDS|length=2904bp|location=Sequence derived from alignment at ch2:2762056..2765083+ (Aspergillus niger KJC3)
ATGGTATATCGTGGGAAGCCTTCTAAGTCATGCCGCGAATGCCGCAAACG
TGATATCAAATGCGATAAAAAGGAAGATGGCTGCTCCCAATGTGTCCGCG
CTGGTCTGAAGTGCTCGGGATACCAAAAGTTAACAGATATAGTCATACTT
AATGAGACCTCTGCTACGGCAGAAAAAGTACTGAAGAAGCACTCTTTAGA
AGGTCCAGCTTCTGCAGGGCCTCTATCAACAAATCTTCTTCCGACTGTTT
TACAACGCGCAAAGCACCTATATATCTCGCAATACGTTCAAGACACACCT
GCAACGGGTATGTACTCGTATATGCAGGTCTTCTACCCGTCCAAATCAGA
CGACTATCCTCTTCTCGAGACCATGATTCATGCGCTTTTCATGGCCACGT
TCTCGTCTCTTCAGGGATGGCCCCCAGCTCTCTATCATGCTCGAAACAAC
TATGGATCAGCTTTGTCATTGACTCGAAAGGCGATCCGGTCACCAAAAGA
GGCTTTGTTGGATAGAACCTTATTCGCGGTGTTGCTCATGAGCATATTTG
AACGGCTCGCCAACGTAGAACAAGGAGCGCTATGTATTCGCAACGGACAT
TTGAAAGGTGCGTTTGAGCTTATGGCCTTGAGGGGTAATAGTCAATTTAC
AGACGGAGGGGGCGTTGCGATGTTTTTGCATCTAACTGAGCTTGTGGTTC
TTGATTGCCTTGCCAATGAAGTTGATATCCCTTCCCGGTTTTTGGCATTG
CGACAACAAGCTCTTGAAGCCGGTGCGGACACATCGTCACTAAGGTGGAG
ATTCTTGGAAATCATGATGCGGTATGCACAGCTGGAGTACACCGCGAAAT
CTTCCACTTCCGCAGAAGACGTGGTTTATCAAGCCAAAGCACTTGACGCA
GAACTTGATCGACTGTCCAAGCACCTGCCTTGTTTCTTCTCGAGAAAGCA
GAGTCCTGAACCCCCAAGCATCCCGCCAACCAAGCCGGACATATATCCCG
ATTACAATACACAAAGATGCTGGAACAACATCCGTGTTCTTCGCATTCAG
CTAATGAAGTTTATATGTGATCAATGTGCTCAGGCCTTGGGAGATTTAGC
CGATGACACCTGGATCATGGCCGAAGTTCATGACTCTAACCGGCGAGCAA
ACTTCCTTGCTACAGACATATGCCTTTCCATACCTGGTAAGGGCGCCCAC
AGCATGCTTCTATATGAGGTCTCCAATGTCCAATCAGCTACACTCTTGTT
TCATCTACATGTGGCCAAAGAGGTTCTTCCAAAGCTCGCTCAATCGAGGC
TATCCATTCAGGAGCGATTACAATTCGTGAAAGTGAAGCAATCTCCCTCA
CAGCAGAGAACATTGGATTGTTTGCTTCATAATGATTATCAAATGCCGCG
GAATATCTGGAAGATGTGGCTTCTCATTGGGAGAGAGGATTTCTCGATCT
GAATGGTATATCGTGGGAAGCCTTCTAAGTCATGCCGCGAATGCCGCAAA
CGTGATATCAAATGCGATAAAAAGGAAGATGGCTGCTCCCAATGTGTCCG
CGCTGGTCTGAAGTGCTCGGGATACCAAAAGTTAACAGATATAGTCATAC
TTAATGAGACCTCTGCTACGGCAGAAAAAGTACTGAAGAAGCACTCTTTA
GAAGGTCCAGCTTCTGCAGGGCCTCTATCAACAAATCTTCTTCCGACTGT
TTTACAACGCGCAAAGCACCTATATATCTCGCAATACGTTCAAGACACAC
CTGCAACGGGTATGTACTCGTATATGCAGGTCTTCTACCCGTCCAAATCA
GACGACTATCCTCTTCTCGAGACCATGATTCATGCGCTTTTCATGGCCAC
GTTCTCGTCTCTTCAGGGATGGCCCCCAGCTCTCTATCATGCTCGAAACA
ACTATGGATCAGCTTTGTCATTGACTCGAAAGGCGATCCGGTCACCAAAA
GAGGCTTTGTTGGATAGAACCTTATTCGCGGTGTTGCTCATGAGCATATT
TGAACGGCTCGCCAACGTAGAACAAGGAGCGCTATGTATTCGCAACGGAC
ATTTGAAAGGTGCGTTTGAGCTTATGGCCTTGAGGGGTAATAGTCAATTT
ACAGACGGAGGGGGCGTTGCGATGTTTTTGCATCTAACTGAGCTTGTGGT
TCTTGATTGCCTTGCCAATGAAGTTGATATCCCTTCCCGGTTTTTGGCAT
TGCGACAACAAGCTCTTGAAGCCGGTGCGGACACATCGTCACTAAGGTGG
AGATTCTTGGAAATCATGATGCGGTATGCACAGCTGGAGTACACCGCGAA
ATCTTCCACTTCCGCAGAAGACGTGGTTTATCAAGCCAAAGCACTTGACG
CAGAACTTGATCGACTGTCCAAGCACCTGCCTTGTTTCTTCTCGAGAAAG
CAGAGTCCTGAACCCCCAAGCATCCCGCCAACCAAGCCGGACATATATCC
CGATTACAATACACAAAGATGCTGGAACAACATCCGTGTTCTTCGCATTC
AGCTAATGAAGTTTATATGTGATCAATGTGCTCAGGCCTTGGGAGATTTA
GCCGATGACACCTGGATCATGGCCGAAGTTCATGACTCTAACCGGCGAGC
AAACTTCCTTGCTACAGACATATGCCTTTCCATACCTGGTAAGGGCGCCC
ACAGCATGCTTCTATATGAGGTCTCCAATGTCCAATCAGCTACACTCTTG
TTTCATCTACATGTGGCCAAAGAGGTTCTTCCAAAGCTCGCTCAATCGAG
GCTATCCATTCAGGAGCGATTACAATTCGTGAAAGTGAAGCAATCTCCCT
CACAGCAGAGAACATTGGATTGTTTGCTTCATAATGATTATCAAATGCCG
CGGAATATCTGGAAGATGTGGCTTCTCATTGGGAGAGAGGATTTCTCGAT
CTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002510KJC3_002510Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002510-T1.utr5p1KJC3_002510-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002510-T1.exon1KJC3_002510-T1.exon1Aspergillus niger KJC3exon
KJC3_002510-T1.exon2KJC3_002510-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002510-T1.cdsKJC3_002510-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002510-T1.utr3p1KJC3_002510-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002510-T1KJC3_002510-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2762056..2765083 +
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