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KJC3_002512-T1, KJC3_002512-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002512-T1
Unique NameKJC3_002512-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2765520..2767859-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002512-T1 ID=KJC3_002512-T1|Name=KJC3_002512-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2340bp|location=Sequence derived from alignment at ch2:2765520..2767859- (Aspergillus niger KJC3)
CGACAATTTTTACTGGGCCCAGAAAAAACCCCGCGCTGGATGGAGAGAAT
CTGTAGTAAATAAGATATCAACTCCATAACTCCACCGATAAGAGGGTGAT
AATTGAGGAGAACAATCAAACTCCACCTCATCTCTTCAAAGCCATAGAAA
CCACAGAAGTGTCCAAAGGTTCACCCCGTATCCCTCAAGCTCGTCAACCA
TGGGCAAGAAGAACAAGAAGTCCGCCGAGCACAAGGAGCGTGTAGCAGCG
AAACAGAATAAGAAGGCTGCTCAAAAGGAGAAGAAGGGCAAGGGCAAGGG
CAAGGACGCCGACAGTGATGTCGAGGATGCTGATTTGGACGCCATCCTTG
CGCAGTATGCTGAGGAACAAGCGAAGTTCATGAAGGTCACTGAGGTAGTG
GGAGGACCGCCGACACCACGGTCGTCTGCAACTGTTCTGGCTTCTCCTTC
CAATCGCAACGAATTGTTGGTATTTGGTGGAGAATACTTCGATGGAAATC
TTGCTACTTTTTTCAACAACCTCTTCGTTTACAATATCGATCGTGCGGAG
TGGAAAGAAGTCACCAGTCCTAATAGTCCGCTCCCTCGCAGTGGACATGC
TTGGTGCCGTGGTGGCAATACGGGAGGTGTCTATCTGTTCGGTGGTAAGT
ATATGGCTCAGAAGCAGCATATCAAGTCTTTAGAGTACTGATGTCTGCAA
TAGGAGAGTTCTCTTCGCCCAAGCAGGGTACCTTCTATCACTACAACGAC
TTCTGGCATCTTGATCCCTCTACAAGGGAATGGACCCGTCTGGACTCGAA
GGGCAAGGGTCCTCCAGCCAGAAGTGGTCACAGAATGACTTACTACAAGG
TCAGTACCTATTCATGCCGGAAAATCTAAATGGAAACTAATCAAAAGACA
GAACTACATTATCCTCTTTGGAGGTTTCCAGGACACCTCCCAACAAACCA
AGTATCTCCAAGACTTGTGGATCTACGACTGTTCCAAGTACACATGGTTC
AACCCCACGCTTTCAACCGCATCCCAGAAGCCCGATCCTCGGTCTTCTTT
CTCCTTCTTGCCGCACGAAAGCGGTGCCGTTCTCTATGGTGGATATTCCC
GTGTGAAAGCGGCCACAGGAATCAACGGCAAGCCCGTCAAGGGTGGCGCT
CAGCGCATGACCATGAAGCCCATGGTGCATCAGGACACCTGGTTCCTCCG
GGTGACTCCCCCGGGACCTGAAGCTCCTGCCAATGCTGCGCCCACCGTAC
GCTGGGAGCGCAGGAAGAAGCCCGCCAACTCTCCCAATCCTCCGCGTGCC
GGTGCCACTATGGCATACCACAAGGGACGTGGCATCATGTTCGGTGGTGT
TCACGACGTCGAGTTGAGCGAGGAAGGCATCGACAGTGAATTCTTCGACA
CCATGTTCGCCTGGAACACCGACCGGAACCGCTTCTTCCCCTTGACGCTC
CGCCGGCCTAGAGCCGCAGGCAAGAAGCAGCTCGCTAACCAGATGAAGTC
CAAGGATCGGAGCAAAGCCGATGAGGAGGAACTTCTGCAGAACCTGAAGG
CTTTAGAGGCTAAGAAGGGTATTCGCAGCGAGCAGGACGACGAACTGCAG
CCGGAGGCACTCAAGAAGGACGAAGAGCCTGAGCCAGAGAAGCCTGCGAT
CGTGCGCTTCGAGATGCCTCACCAGCGATTCAACGCCCAATTGGCCGTTC
AGGATGATACCTTGTACATCTTTGGTGGTACTTTCGAGAAGGGAGATCGG
GAATTCACCTTCAACGACATGTACTCGATCGATCTCGTCAAGCTCGACGG
CGTCAAGGAGATCTTCTACAACGAGCCCTCTAACTGGCACCTTCTCAACG
AAGCAGACAGCGACGAGGAGATGGATGATGACGAAGAGGAAGATCTTGAA
GATGAGGAAGAAGAGGAGGACGCGATGTCGTTGGATACAGGTTCCCCAGC
CCCCACGGAAGTGACCGTGCCTTTTGTCACTCAGGAGATGGAGAATCTGG
AAGTGGAGGAACAAGAGGGAGAGCCATCTGTGCAGGACAGCAGACCTCTG
CCTCGTCCATTCGAGAGTTTGCGCGACTACTTCAGCCGCACGGGCGAGGA
CTGGCAGCGTATCTTGTTGGATACTTTGAAAGAGAAGGGGATCGCCACAG
AAAAGAACATCAAGGAGCTGCGGAAGGATGCGTTCAACATGGCGGAAGAG
AAGTGGTGGGATAGCAGAGAAGAAGTCATGGCTTTGGAAGATGAGCAGGA
AGAAGCTGGTATCGGGGAGGTTGTTAGCATTGCTGATCGGGGTGACAATG
TTGGCGGTGCTGGAAGACGCAGGTGATGCACATATATACC
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Coding sequence (CDS) from alignment at ch2:2765520..2767859-

>KJC3_002512-T1 ID=KJC3_002512-T1|Name=KJC3_002512-T1|organism=Aspergillus niger KJC3|type=CDS|length=6048bp|location=Sequence derived from alignment at ch2:2765520..2767859- (Aspergillus niger KJC3)
AACTACATTATCCTCTTTGGAGGTTTCCAGGACACCTCCCAACAAACCAA
GTATCTCCAAGACTTGTGGATCTACGACTGTTCCAAGTACACATGGTTCA
ACCCCACGCTTTCAACCGCATCCCAGAAGCCCGATCCTCGGTCTTCTTTC
TCCTTCTTGCCGCACGAAAGCGGTGCCGTTCTCTATGGTGGATATTCCCG
TGTGAAAGCGGCCACAGGAATCAACGGCAAGCCCGTCAAGGGTGGCGCTC
AGCGCATGACCATGAAGCCCATGGTGCATCAGGACACCTGGTTCCTCCGG
GTGACTCCCCCGGGACCTGAAGCTCCTGCCAATGCTGCGCCCACCGTACG
CTGGGAGCGCAGGAAGAAGCCCGCCAACTCTCCCAATCCTCCGCGTGCCG
GTGCCACTATGGCATACCACAAGGGACGTGGCATCATGTTCGGTGGTGTT
CACGACGTCGAGTTGAGCGAGGAAGGCATCGACAGTGAATTCTTCGACAC
CATGTTCGCCTGGAACACCGACCGGAACCGCTTCTTCCCCTTGACGCTCC
GCCGGCCTAGAGCCGCAGGCAAGAAGCAGCTCGCTAACCAGATGAAGTCC
AAGGATCGGAGCAAAGCCGATGAGGAGGAACTTCTGCAGAACCTGAAGGC
TTTAGAGGCTAAGAAGGGTATTCGCAGCGAGCAGGACGACGAACTGCAGC
CGGAGGCACTCAAGAAGGACGAAGAGCCTGAGCCAGAGAAGCCTGCGATC
GTGCGCTTCGAGATGCCTCACCAGCGATTCAACGCCCAATTGGCCGTTCA
GGATGATACCTTGTACATCTTTGGTGGTACTTTCGAGAAGGGAGATCGGG
AATTCACCTTCAACGACATGTACTCGATCGATCTCGTCAAGCTCGACGGC
GTCAAGGAGATCTTCTACAACGAGCCCTCTAACTGGCACCTTCTCAACGA
AGCAGACAGCGACGAGGAGATGGATGATGACGAAGAGGAAGATCTTGAAG
ATGAGGAAGAAGAGGAGGACGCGATGTCGTTGGATACAGGTTCCCCAGCC
CCCACGGAAGTGACCGTGCCTTTTGTCACTCAGGAGATGGAGAATCTGGA
AGTGGAGGAACAAGAGGGAGAGCCATCTGTGCAGGACAGCAGACCTCTGC
CTCGTCCATTCGAGAGTTTGCGCGACTACTTCAGCCGCACGGGCGAGGAC
TGGCAGCGTATCTTGTTGGATACTTTGAAAGAGAAGGGGATCGCCACAGA
AAAGAACATCAAGGAGCTGCGGAAGGATGCGTTCAACATGGCGGAAGAGA
AGTGGTGGGATAGCAGAGAAGAAGTCATGGCTTTGGAAGATGAGCAGGAA
GAAGCTGGTATCGGGGAGGTTGTTAGCATTGCTGATCGGGGTGACAATGT
TGGCGGTGCTGGAAGACGCAGGTGAGAGAGTTCTCTTCGCCCAAGCAGGG
TACCTTCTATCACTACAACGACTTCTGGCATCTTGATCCCTCTACAAGGG
AATGGACCCGTCTGGACTCGAAGGGCAAGGGTCCTCCAGCCAGAAGTGGT
CACAGAATGACTTACTACAAGATGGGCAAGAAGAACAAGAAGTCCGCCGA
GCACAAGGAGCGTGTAGCAGCGAAACAGAATAAGAAGGCTGCTCAAAAGG
AGAAGAAGGGCAAGGGCAAGGGCAAGGACGCCGACAGTGATGTCGAGGAT
GCTGATTTGGACGCCATCCTTGCGCAGTATGCTGAGGAACAAGCGAAGTT
CATGAAGGTCACTGAGGTAGTGGGAGGACCGCCGACACCACGGTCGTCTG
CAACTGTTCTGGCTTCTCCTTCCAATCGCAACGAATTGTTGGTATTTGGT
GGAGAATACTTCGATGGAAATCTTGCTACTTTTTTCAACAACCTCTTCGT
TTACAATATCGATCGTGCGGAGTGGAAAGAAGTCACCAGTCCTAATAGTC
CGCTCCCTCGCAGTGGACATGCTTGGTGCCGTGGTGGCAATACGGGAGGT
GTCTATCTGTTCGGTGAACTACATTATCCTCTTTGGAGGTTTCCAGGACA
CCTCCCAACAAACCAAGTATCTCCAAGACTTGTGGATCTACGACTGTTCC
AAGTACACATGGTTCAACCCCACGCTTTCAACCGCATCCCAGAAGCCCGA
TCCTCGGTCTTCTTTCTCCTTCTTGCCGCACGAAAGCGGTGCCGTTCTCT
ATGGTGGATATTCCCGTGTGAAAGCGGCCACAGGAATCAACGGCAAGCCC
GTCAAGGGTGGCGCTCAGCGCATGACCATGAAGCCCATGGTGCATCAGGA
CACCTGGTTCCTCCGGGTGACTCCCCCGGGACCTGAAGCTCCTGCCAATG
CTGCGCCCACCGTACGCTGGGAGCGCAGGAAGAAGCCCGCCAACTCTCCC
AATCCTCCGCGTGCCGGTGCCACTATGGCATACCACAAGGGACGTGGCAT
CATGTTCGGTGGTGTTCACGACGTCGAGTTGAGCGAGGAAGGCATCGACA
GTGAATTCTTCGACACCATGTTCGCCTGGAACACCGACCGGAACCGCTTC
TTCCCCTTGACGCTCCGCCGGCCTAGAGCCGCAGGCAAGAAGCAGCTCGC
TAACCAGATGAAGTCCAAGGATCGGAGCAAAGCCGATGAGGAGGAACTTC
TGCAGAACCTGAAGGCTTTAGAGGCTAAGAAGGGTATTCGCAGCGAGCAG
GACGACGAACTGCAGCCGGAGGCACTCAAGAAGGACGAAGAGCCTGAGCC
AGAGAAGCCTGCGATCGTGCGCTTCGAGATGCCTCACCAGCGATTCAACG
CCCAATTGGCCGTTCAGGATGATACCTTGTACATCTTTGGTGGTACTTTC
GAGAAGGGAGATCGGGAATTCACCTTCAACGACATGTACTCGATCGATCT
CGTCAAGCTCGACGGCGTCAAGGAGATCTTCTACAACGAGCCCTCTAACT
GGCACCTTCTCAACGAAGCAGACAGCGACGAGGAGATGGATGATGACGAA
GAGGAAGATCTTGAAGATGAGGAAGAAGAGGAGGACGCGATGTCGTTGGA
TACAGGTTCCCCAGCCCCCACGGAAGTGACCGTGCCTTTTGTCACTCAGG
AGATGGAGAATCTGGAAGTGGAGGAACAAGAGGGAGAGCCATCTGTGCAG
GACAGCAGACCTCTGCCTCGTCCATTCGAGAGTTTGCGCGACTACTTCAG
CCGCACGGGCGAGGACTGGCAGCGTATCTTGTTGGATACTTTGAAAGAGA
AGGGGATCGCCACAGAAAAGAACATCAAGGAGCTGCGGAAGGATGCGTTC
AACATGGCGGAAGAGAAGTGGTGGGATAGCAGAGAAGAAGTCATGGCTTT
GGAAGATGAGCAGGAAGAAGCTGGTATCGGGGAGGTTGTTAGCATTGCTG
ATCGGGGTGACAATGTTGGCGGTGCTGGAAGACGCAGGTGAGAGAGTTCT
CTTCGCCCAAGCAGGGTACCTTCTATCACTACAACGACTTCTGGCATCTT
GATCCCTCTACAAGGGAATGGACCCGTCTGGACTCGAAGGGCAAGGGTCC
TCCAGCCAGAAGTGGTCACAGAATGACTTACTACAAGATGGGCAAGAAGA
ACAAGAAGTCCGCCGAGCACAAGGAGCGTGTAGCAGCGAAACAGAATAAG
AAGGCTGCTCAAAAGGAGAAGAAGGGCAAGGGCAAGGGCAAGGACGCCGA
CAGTGATGTCGAGGATGCTGATTTGGACGCCATCCTTGCGCAGTATGCTG
AGGAACAAGCGAAGTTCATGAAGGTCACTGAGGTAGTGGGAGGACCGCCG
ACACCACGGTCGTCTGCAACTGTTCTGGCTTCTCCTTCCAATCGCAACGA
ATTGTTGGTATTTGGTGGAGAATACTTCGATGGAAATCTTGCTACTTTTT
TCAACAACCTCTTCGTTTACAATATCGATCGTGCGGAGTGGAAAGAAGTC
ACCAGTCCTAATAGTCCGCTCCCTCGCAGTGGACATGCTTGGTGCCGTGG
TGGCAATACGGGAGGTGTCTATCTGTTCGGTGAACTACATTATCCTCTTT
GGAGGTTTCCAGGACACCTCCCAACAAACCAAGTATCTCCAAGACTTGTG
GATCTACGACTGTTCCAAGTACACATGGTTCAACCCCACGCTTTCAACCG
CATCCCAGAAGCCCGATCCTCGGTCTTCTTTCTCCTTCTTGCCGCACGAA
AGCGGTGCCGTTCTCTATGGTGGATATTCCCGTGTGAAAGCGGCCACAGG
AATCAACGGCAAGCCCGTCAAGGGTGGCGCTCAGCGCATGACCATGAAGC
CCATGGTGCATCAGGACACCTGGTTCCTCCGGGTGACTCCCCCGGGACCT
GAAGCTCCTGCCAATGCTGCGCCCACCGTACGCTGGGAGCGCAGGAAGAA
GCCCGCCAACTCTCCCAATCCTCCGCGTGCCGGTGCCACTATGGCATACC
ACAAGGGACGTGGCATCATGTTCGGTGGTGTTCACGACGTCGAGTTGAGC
GAGGAAGGCATCGACAGTGAATTCTTCGACACCATGTTCGCCTGGAACAC
CGACCGGAACCGCTTCTTCCCCTTGACGCTCCGCCGGCCTAGAGCCGCAG
GCAAGAAGCAGCTCGCTAACCAGATGAAGTCCAAGGATCGGAGCAAAGCC
GATGAGGAGGAACTTCTGCAGAACCTGAAGGCTTTAGAGGCTAAGAAGGG
TATTCGCAGCGAGCAGGACGACGAACTGCAGCCGGAGGCACTCAAGAAGG
ACGAAGAGCCTGAGCCAGAGAAGCCTGCGATCGTGCGCTTCGAGATGCCT
CACCAGCGATTCAACGCCCAATTGGCCGTTCAGGATGATACCTTGTACAT
CTTTGGTGGTACTTTCGAGAAGGGAGATCGGGAATTCACCTTCAACGACA
TGTACTCGATCGATCTCGTCAAGCTCGACGGCGTCAAGGAGATCTTCTAC
AACGAGCCCTCTAACTGGCACCTTCTCAACGAAGCAGACAGCGACGAGGA
GATGGATGATGACGAAGAGGAAGATCTTGAAGATGAGGAAGAAGAGGAGG
ACGCGATGTCGTTGGATACAGGTTCCCCAGCCCCCACGGAAGTGACCGTG
CCTTTTGTCACTCAGGAGATGGAGAATCTGGAAGTGGAGGAACAAGAGGG
AGAGCCATCTGTGCAGGACAGCAGACCTCTGCCTCGTCCATTCGAGAGTT
TGCGCGACTACTTCAGCCGCACGGGCGAGGACTGGCAGCGTATCTTGTTG
GATACTTTGAAAGAGAAGGGGATCGCCACAGAAAAGAACATCAAGGAGCT
GCGGAAGGATGCGTTCAACATGGCGGAAGAGAAGTGGTGGGATAGCAGAG
AAGAAGTCATGGCTTTGGAAGATGAGCAGGAAGAAGCTGGTATCGGGGAG
GTTGTTAGCATTGCTGATCGGGGTGACAATGTTGGCGGTGCTGGAAGACG
CAGGTGAGAGAGTTCTCTTCGCCCAAGCAGGGTACCTTCTATCACTACAA
CGACTTCTGGCATCTTGATCCCTCTACAAGGGAATGGACCCGTCTGGACT
CGAAGGGCAAGGGTCCTCCAGCCAGAAGTGGTCACAGAATGACTTACTAC
AAGATGGGCAAGAAGAACAAGAAGTCCGCCGAGCACAAGGAGCGTGTAGC
AGCGAAACAGAATAAGAAGGCTGCTCAAAAGGAGAAGAAGGGCAAGGGCA
AGGGCAAGGACGCCGACAGTGATGTCGAGGATGCTGATTTGGACGCCATC
CTTGCGCAGTATGCTGAGGAACAAGCGAAGTTCATGAAGGTCACTGAGGT
AGTGGGAGGACCGCCGACACCACGGTCGTCTGCAACTGTTCTGGCTTCTC
CTTCCAATCGCAACGAATTGTTGGTATTTGGTGGAGAATACTTCGATGGA
AATCTTGCTACTTTTTTCAACAACCTCTTCGTTTACAATATCGATCGTGC
GGAGTGGAAAGAAGTCACCAGTCCTAATAGTCCGCTCCCTCGCAGTGGAC
ATGCTTGGTGCCGTGGTGGCAATACGGGAGGTGTCTATCTGTTCGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002512KJC3_002512Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002512-T1KJC3_002512-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002512-T1.cdsKJC3_002512-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002512-T1.utr3p1KJC3_002512-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002512-T1.exon3KJC3_002512-T1.exon3Aspergillus niger KJC3exon
KJC3_002512-T1.exon2KJC3_002512-T1.exon2Aspergillus niger KJC3exon
KJC3_002512-T1.exon1KJC3_002512-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002512-T1.utr5p1KJC3_002512-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR025183
DBxrefInterPro:IPR015915
DBxrefPFAM:PF13854
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
DBxrefPFAM:PF07646
DBxrefPFAM:PF01344
DBxrefPFAM:PF13422
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2765520..2767859 -
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