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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2774888..2777619+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002514-T1 ID=KJC3_002514-T1|Name=KJC3_002514-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2732bp|location=Sequence derived from alignment at ch2:2774888..2777619+ (Aspergillus niger KJC3)
TCTTCGTCCTTCACCGCGACAAGCTCGACTTCGTTCACCCATCCACCTCC
CCTCTTCACCCCCTTTTGATCATCGCGTGTTTACTCGCCACCTCTATCTT
AAACCTGTCGCTGTCGTCTCATCGACCTTTCGACTCTCCCACGTCTGCTA
TTCCAGCGTTCTTGGGCTGATCGTGTAGAAGACCCGCCTGTCCTGAACGT
CTCTCGACCCACGTCGCGTCTTCCAAAGGCAAGAAAAAGGATAGTTTGGG
CGTCGGATACTGCTAAAAAGGCCTCGTTTTACTTCTCGTTTTCTTTTTAC
TCATCTCCCTTCACGCTTCCCTCCGCCTTCCAACCCATTCGGACCCTGAG
CACATCTTCGTCCACCGTCCAGCACCCAATCTCTCCTGCCCTCGTGCCCG
ACCCGATTGGTTTCATTTTTTCCTTCTTCCCTCTACCTTGCACTGCTTCA
CTCTGAAGCTTTCCGCTCCAAGTCCAACCTCCAAGGCCTCGTGGCAATCC
CAGACCTTTTTCACACTTTCCTCGTCGGCTCTCCTTTCACAGCATCACTT
CCCGCACTGTGCACGAGTTCACCAATCTTCCCACATCCTTCCAAGCATCA
GAATTCCCTCTCCATCCGATCGCCAGCACCAGCAAGTTTTATTGGGAACT
CCTGGTGTACATAGTCGATCAAATAAAGCTGCAGTGAAAAGAAAAGAAGA
GCTGTTCTGAAAAGTGAAAACACACTTGGACACGTCCTGCGTAAGTGAAG
CAAGCAAGCACAGAAAGTCCGCACAGTTTAGGCACGCAAACCATCATGTC
TGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTTTGGAGGACCCTT
CCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTGCGTTG
GACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGCCGATGTGAAAAC
GGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACCGTGGTCCCCG
ATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGTCGACG
GCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACATCGTCCCCA
GGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCAGGAGG
CTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCCGTCGT
CTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCCGTCGA
GCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGTGAGTT
TGAACACGATACGGTTCGATTTTTCTACTGTCTTTGCTAACCCGGATGCT
AGGCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGATGCC
CCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCCCCA
TATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGA
TCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCC
CTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCA
CATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAAC
GCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCT
GCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCC
CGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACCCTC
ACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGC
CCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTAC
TCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACG
GTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCC
GCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGATCTA
CATCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGCCAAGA
TCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCC
CAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGAGTG
CAATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGGTTAGTATCCTT
CCCAAACGATGTGAAATGACCCCTTCTAACATCCTGCAGAAAGCGAGAAG
CATCGGATCTAGGCTAAGTGAATTCATTCTGTTTCTGTTCCCGCCCGATG
AATCGGTTTGCTGTCTTTCTGCTTTGCGACTACTCCAAAAGTCATCCGTT
ATATTCCGGTGGCTCTGATAGTTTGGTTTGGGTTCCGTCTATATTTTTCT
TTCGGGGTCTGCGCGTTTTGTTTTCCTCAATTTCTTTTGTGTGTACTGTA
TTTATTTGGAAAAGCGCTGTTTAATTAATAATACCTTTCCCATAACCCTT
CCCTATCCTACCATCCTACACGTCATATTCCTCACACTACACATACACAA
AGCATACTATCCATTGACATCAATTCACTCCACTCTCTGAAACCTCACAT
GCCTCATAATTCCAAACCCTCCCTCCCCCTTCTCCGCATCCCCTCCATCG
CCCTTCAACATCCACCCCCTAATCGGCGCAAT back to topCoding sequence (CDS) from alignment at ch2:2774888..2777619+ >KJC3_002514-T1 ID=KJC3_002514-T1|Name=KJC3_002514-T1|organism=Aspergillus niger KJC3|type=CDS|length=4221bp|location=Sequence derived from alignment at ch2:2774888..2777619+ (Aspergillus niger KJC3)
ATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTTTGGAGGA
CCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTG
CGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGCCGATGTG
AAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACCGTGGT
CCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGT
CGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACATCGT
CCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCA
GGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCC
GTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCC
GTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGC
CTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGATGCCCCTT
CTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCCCCATATT
CTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGATCCA
GGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCCCTGT
CTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCACATC
GCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAACGCTT
CGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCTGCTG
GCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCCCGCT
GGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACCCTCACCC
CAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGCCCGG
CAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTACTCCC
CACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACGGTGC
GCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCCGCTC
CCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGATCTACATC
CCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGCCAAGATCAA
CGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCCCAGG
AGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGAGTGCAAT
CAGATGGCGCTCTACATGCTCTACTCGAGACTTGAAAGCGAGAAGCATCG
GATCTAGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTT
TGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAG
CGTCCTGCGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGC
CGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACA
CCGTGGTCCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAACCC
ATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCA
ACATCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCT
CCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCC
CAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCG
TGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTG
CGAAGGCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGAT
GCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCC
CCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAG
AGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTT
CCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGT
GCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAG
AACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGT
CCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCA
GCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACC
CTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAG
GGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGC
TACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCT
ACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCT
GCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGAT
CTACATCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGCCA
AGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAG
CCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGA
GTGCAATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGAAAGCGAGA
AGCATCGGATCTAGATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAG
CGTCCTTTGGAGGACCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGA
AGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGG
CGTATGCCGATGTGAAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAG
GGCGACACCGTGGTCCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGAC
ACAACCCATTCAGTCGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAAT
CCGAGCAACATCGTCCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCT
GTAATCTCCAGCCAGGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAA
CGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACT
ATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGAT
GCTGCTGCGAAGGCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCC
CCTTGATGCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGT
TGATTCCCCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGT
ATTCGAGAGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGC
TTGCCTTCCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTG
ACGCAGTGCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAG
CTGACAGAACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAG
CGGCGGTCCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACG
TGCCTCAGCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGT
CACCACCCTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTA
CCTCCAGGGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCT
ACGGTGCTACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCC
GCGCCCTACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCC
GACGCCTGCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCC
AGCAGATCTACATCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGA
GGAGCCAAGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGAT
CAACGAGCCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTA
CCCAGGAGTGCAATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGAA
AGCGAGAAGCATCGGATCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002514-T1.utr5p1 | KJC3_002514-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002514-T1.utr3p1 | KJC3_002514-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR004087 |
| DBxref | PFAM:PF00013 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2774888..2777619 + |
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