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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2785160..2787673- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002518-T1 ID=KJC3_002518-T1|Name=KJC3_002518-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2514bp|location=Sequence derived from alignment at ch2:2785160..2787673- (Aspergillus niger KJC3)
AATCAACCACATCTGACAGGCCGCGAATTGCTTCAATCCAATTCTACCTA
CCCACCGCTGTCGCATGCCTCATGTCTCTCGGCAGACATGCCTACAGGCA
TGCATCATCATCGTCTAATAATCTCCTCGATCACGTCTGGATCAGCGAGG
ACTTCCTAGCTTCCGCGTTCCGACGCTTCGCTAACGGCCAACGACGCTAC
GAGAGCCGCGTCCCGGGGCCATTGGAGGCTCGACGACGACTCGCTAAGAG
GAGGAATACTGCCCTCGCTGGGATTGCGGGGACGGGGCCGCTGGATGATT
TTGCTTGTTTGTTTGGGCGCAATGGGAGGGAACATATGAAATGGACGACC
ACGACGGAGGGGAGGAAGGCGAAGGGTAAGATATTGGATCTGTTGAAATA
CTATTGGTGGATGATGCTAATGGTGCTTGGTGTTGGTAGGTTCGCATTTT
TATCAATTGAGTTCGCCGTCGCCGTCGCCGCCGCCGCCGCCGATTCCGTC
CGCGTATAATGGGGATGGTGCTATTGAGGATGAGTTTGCGTTGGGGAGGC
CGTCACCTGGGAGGCCGGATATGCCGCCGGATGGGCCTGATGAGGTGTCG
CGCGATCAGTATTTGAGGAGGCGGTTGAGAGAATGTCGGACGGTCGAGGC
TGTCAAGAGGGTTGTTCGGCAATTGGATGTTGATCTTTTGCGAGAGCCGG
GGTATAGCCGTTTCATATTCGATCACTTGTTGTCGTGTTCCAGGACGGGA
GAGTTGGGTGTTGACGAGCTTGTATCGTTCCTGGACGACCCACAGCTTAA
TATTCGGGGAGCGAGGAATTATTTGACTGCGGTCGAGTATATCGCTTCGC
GCGGGATCAGGCATGGGAAGTGGCATCCACTCTTCGACAATGTCGTTCAG
GCTCTGGAGCTTGGGATTGTTCCGCCTGAGGAGTTGTGCGCTATAATAGA
GGCTATTGCGAAGGCAGCGCCGGCGAAGACTGAGAGAAAGAGGCAGTTCC
CGGATACGGTCACGGCAATGTATCAGGCGATGTGGGATGCAATTGGACGA
TGCGATATCTACGGGCACAGTGATCTCGATGAGGGGATAGTTGATGCGTG
GCTTGGTGCTCTATGGGAGAGGAACGTCTGCGACGATTTGCCCTTGGCTA
AAAGCATACTCCTTGCTGCTCAGAGACTGGAGCCGGCATGTTGCTCGTGG
GCTACTCTGTTCTTGACGCGTTGGCTGGAGCTTCCTAAGAAGCTGCGAGT
TGGCGCTGGTGAAGTCTACGCGAGTGATATACTGAGCAGTTTCAAGCCTG
ATCTTGCAACAGCAGCTGTCATATCGACCACTGAATTCTTGGCGTCGAAC
AAGAAAGATCTACTCGGGCGGTGGCACAGCTGCTTATTGCAGACTAAAGA
TATCCCGCAACTTGTTTCGTCAAAAGCATGGCTTGATGTTCGATCGCGGG
ACGATATAACGGAGTCAAGTCTCTCGCTGCAACATCAGATCATCTTACGC
ATATGGGCTCTACGAACTCTCAGCAAAGGTCTTTCCGACGGGCCTCTATG
GAGGAAGGATGTACGAGCCACAGATGTGCCTATAAGACGCCTCTTCGGCC
TCTGCGAGTCCATCAACAAGAACGAAACCAGCGAAGACATGCTAAGCAGT
CTAATGAAAGGCATCCATGATCTGGGGCTACCAGCAAACGGCCTCCTAAT
ACTAGCTGTCGACATGAAAGCCCGCAACACCCTCACGAAATCGGCCCGTC
GCACCCTGACCAACATGGAATCATCATCCAACATCTCCTTCGCCAACATC
TTCGCCAACCTTGACGCCTACAACGCAAGCACCCCCCACTTCTTCGCCAA
ATTCGAACAAATGACCCGCCAAATCGACATCACCTCCCCCGACTTCATCT
CCCACGGTCTCGACCTCGCCAGAACCGGCGACTCTCGCAGCGTGTGGACA
CTCATCCGCCTCCTCCGTTCCCACACCCCTCTTAAAATCGCCCTCTCCAA
ATCATGGATTCCTATCCCCGACCCCTCAGAAAAAGCTCTCGTGCGCTACT
ACCCCGAGCCCAGAACCAGCGACTGCCCGGACCCGCACGCAGCTCTCGAA
ATGATCCACCTTCTTGCCGTGTCACTCGCGTGCTCGAGGCGCCTGAGCCC
ACGCCGTTCTTACAGTCTCGTGCATTGGCTGTATGTCTTCCTGGTGAAGC
ATAATGCGCCTGTTAAGCCGGCGATTGCACGTGCTTTGTATCATGCTGGT
GTTGAGCGCTTTCGGCGGGAGGGGTTGCGTGTTTCGCTCACGCAGTATGC
GTATATCTATGACGTTGTGGAGGAGGTTGAAGGGTCTGATGTCGTTGAGA
ATCTTATGGAGCCGCCGAGGATTGGACATCGGTTTTCGGGGGGTGAAGAA
GGGGAGGCTTGTTCTGAGTGATTGTGAATACGAAGAGCTGCTGTGGTTGG
TGAGACGTGTTTTACTTTAGTTTGGCTTGATATCCGGACTGTATACTAGT
AGTATAGATATAGT back to topCoding sequence (CDS) from alignment at ch2:2785160..2787673- >KJC3_002518-T1 ID=KJC3_002518-T1|Name=KJC3_002518-T1|organism=Aspergillus niger KJC3|type=CDS|length=4572bp|location=Sequence derived from alignment at ch2:2785160..2787673- (Aspergillus niger KJC3)
GTTCGCATTTTTATCAATTGAGTTCGCCGTCGCCGTCGCCGCCGCCGCCG
CCGATTCCGTCCGCGTATAATGGGGATGGTGCTATTGAGGATGAGTTTGC
GTTGGGGAGGCCGTCACCTGGGAGGCCGGATATGCCGCCGGATGGGCCTG
ATGAGGTGTCGCGCGATCAGTATTTGAGGAGGCGGTTGAGAGAATGTCGG
ACGGTCGAGGCTGTCAAGAGGGTTGTTCGGCAATTGGATGTTGATCTTTT
GCGAGAGCCGGGGTATAGCCGTTTCATATTCGATCACTTGTTGTCGTGTT
CCAGGACGGGAGAGTTGGGTGTTGACGAGCTTGTATCGTTCCTGGACGAC
CCACAGCTTAATATTCGGGGAGCGAGGAATTATTTGACTGCGGTCGAGTA
TATCGCTTCGCGCGGGATCAGGCATGGGAAGTGGCATCCACTCTTCGACA
ATGTCGTTCAGGCTCTGGAGCTTGGGATTGTTCCGCCTGAGGAGTTGTGC
GCTATAATAGAGGCTATTGCGAAGGCAGCGCCGGCGAAGACTGAGAGAAA
GAGGCAGTTCCCGGATACGGTCACGGCAATGTATCAGGCGATGTGGGATG
CAATTGGACGATGCGATATCTACGGGCACAGTGATCTCGATGAGGGGATA
GTTGATGCGTGGCTTGGTGCTCTATGGGAGAGGAACGTCTGCGACGATTT
GCCCTTGGCTAAAAGCATACTCCTTGCTGCTCAGAGACTGGAGCCGGCAT
GTTGCTCGTGGGCTACTCTGTTCTTGACGCGTTGGCTGGAGCTTCCTAAG
AAGCTGCGAGTTGGCGCTGGTGAAGTCTACGCGAGTGATATACTGAGCAG
TTTCAAGCCTGATCTTGCAACAGCAGCTGTCATATCGACCACTGAATTCT
TGGCGTCGAACAAGAAAGATCTACTCGGGCGGTGGCACAGCTGCTTATTG
CAGACTAAAGATATCCCGCAACTTGTTTCGTCAAAAGCATGGCTTGATGT
TCGATCGCGGGACGATATAACGGAGTCAAGTCTCTCGCTGCAACATCAGA
TCATCTTACGCATATGGGCTCTACGAACTCTCAGCAAAGGTCTTTCCGAC
GGGCCTCTATGGAGGAAGGATGTACGAGCCACAGATGTGCCTATAAGACG
CCTCTTCGGCCTCTGCGAGTCCATCAACAAGAACGAAACCAGCGAAGACA
TGCTAAGCAGTCTAATGAAAGGCATCCATGATCTGGGGCTACCAGCAAAC
GGCCTCCTAATACTAGCTGTCGACATGAAAGCCCGCAACACCCTCACGAA
ATCGGCCCGTCGCACCCTGACCAACATGGAATCATCATCCAACATCTCCT
TCGCCAACATCTTCGCCAACCTTGACGCCTACAACGCAAGCACCCCCCAC
TTCTTCGCCAAATTCGAACAAATGACCCGCCAAATCGACATCACCTCCCC
CGACTTCATCTCCCACGGTCTCGACCTCGCCAGAACCGGCGACTCTCGCA
GCGTGTGGACACTCATCCGCCTCCTCCGTTCCCACACCCCTCTTAAAATC
GCCCTCTCCAAATCATGGATTCCTATCCCCGACCCCTCAGAAAAAGCTCT
CGTGCGCTACTACCCCGAGCCCAGAACCAGCGACTGCCCGGACCCGCACG
CAGCTCTCGAAATGATCCACCTTCTTGCCGTGTCACTCGCGTGCTCGAGG
CGCCTGAGCCCACGCCGTTCTTACAGTCTCGTGCATTGGCTGTATGTCTT
CCTGGTGAAGCATAATGCGCCTGTTAAGCCGGCGATTGCACGTGCTTTGT
ATCATGCTGGTGTTGAGCGCTTTCGGCGGGAGGGGTTGCGTGTTTCGCTC
ACGCAGTATGCGTATATCTATGACGTTGTGGAGGAGGTTGAAGGGTCTGA
TGTCGTTGAGAATCTTATGGAGCCGCCGAGGATTGGACATCGGTTTTCGG
GGGGTGAAGAAGGGGAGGCTTGTTCTGAGTGAATGTCTCTCGGCAGACAT
GCCTACAGGCATGCATCATCATCGTCTAATAATCTCCTCGATCACGTCTG
GATCAGCGAGGACTTCCTAGCTTCCGCGTTCCGACGCTTCGCTAACGGCC
AACGACGCTACGAGAGCCGCGTCCCGGGGCCATTGGAGGCTCGACGACGA
CTCGCTAAGAGGAGGAATACTGCCCTCGCTGGGATTGCGGGGACGGGGCC
GCTGGATGATTTTGCTTGTTTGTTTGGGCGCAATGGGAGGGAACATATGA
AATGGACGACCACGACGGAGGGGAGGAAGGCGAAGGGTTCGCATTTTTAT
CAATTGAGTTCGCCGTCGCCGTCGCCGCCGCCGCCGCCGATTCCGTCCGC
GTATAATGGGGATGGTGCTATTGAGGATGAGTTTGCGTTGGGGAGGCCGT
CACCTGGGAGGCCGGATATGCCGCCGGATGGGCCTGATGAGGTGTCGCGC
GATCAGTATTTGAGGAGGCGGTTGAGAGAATGTCGGACGGTCGAGGCTGT
CAAGAGGGTTGTTCGGCAATTGGATGTTGATCTTTTGCGAGAGCCGGGGT
ATAGCCGTTTCATATTCGATCACTTGTTGTCGTGTTCCAGGACGGGAGAG
TTGGGTGTTGACGAGCTTGTATCGTTCCTGGACGACCCACAGCTTAATAT
TCGGGGAGCGAGGAATTATTTGACTGCGGTCGAGTATATCGCTTCGCGCG
GGATCAGGCATGGGAAGTGGCATCCACTCTTCGACAATGTCGTTCAGGCT
CTGGAGCTTGGGATTGTTCCGCCTGAGGAGTTGTGCGCTATAATAGAGGC
TATTGCGAAGGCAGCGCCGGCGAAGACTGAGAGAAAGAGGCAGTTCCCGG
ATACGGTCACGGCAATGTATCAGGCGATGTGGGATGCAATTGGACGATGC
GATATCTACGGGCACAGTGATCTCGATGAGGGGATAGTTGATGCGTGGCT
TGGTGCTCTATGGGAGAGGAACGTCTGCGACGATTTGCCCTTGGCTAAAA
GCATACTCCTTGCTGCTCAGAGACTGGAGCCGGCATGTTGCTCGTGGGCT
ACTCTGTTCTTGACGCGTTGGCTGGAGCTTCCTAAGAAGCTGCGAGTTGG
CGCTGGTGAAGTCTACGCGAGTGATATACTGAGCAGTTTCAAGCCTGATC
TTGCAACAGCAGCTGTCATATCGACCACTGAATTCTTGGCGTCGAACAAG
AAAGATCTACTCGGGCGGTGGCACAGCTGCTTATTGCAGACTAAAGATAT
CCCGCAACTTGTTTCGTCAAAAGCATGGCTTGATGTTCGATCGCGGGACG
ATATAACGGAGTCAAGTCTCTCGCTGCAACATCAGATCATCTTACGCATA
TGGGCTCTACGAACTCTCAGCAAAGGTCTTTCCGACGGGCCTCTATGGAG
GAAGGATGTACGAGCCACAGATGTGCCTATAAGACGCCTCTTCGGCCTCT
GCGAGTCCATCAACAAGAACGAAACCAGCGAAGACATGCTAAGCAGTCTA
ATGAAAGGCATCCATGATCTGGGGCTACCAGCAAACGGCCTCCTAATACT
AGCTGTCGACATGAAAGCCCGCAACACCCTCACGAAATCGGCCCGTCGCA
CCCTGACCAACATGGAATCATCATCCAACATCTCCTTCGCCAACATCTTC
GCCAACCTTGACGCCTACAACGCAAGCACCCCCCACTTCTTCGCCAAATT
CGAACAAATGACCCGCCAAATCGACATCACCTCCCCCGACTTCATCTCCC
ACGGTCTCGACCTCGCCAGAACCGGCGACTCTCGCAGCGTGTGGACACTC
ATCCGCCTCCTCCGTTCCCACACCCCTCTTAAAATCGCCCTCTCCAAATC
ATGGATTCCTATCCCCGACCCCTCAGAAAAAGCTCTCGTGCGCTACTACC
CCGAGCCCAGAACCAGCGACTGCCCGGACCCGCACGCAGCTCTCGAAATG
ATCCACCTTCTTGCCGTGTCACTCGCGTGCTCGAGGCGCCTGAGCCCACG
CCGTTCTTACAGTCTCGTGCATTGGCTGTATGTCTTCCTGGTGAAGCATA
ATGCGCCTGTTAAGCCGGCGATTGCACGTGCTTTGTATCATGCTGGTGTT
GAGCGCTTTCGGCGGGAGGGGTTGCGTGTTTCGCTCACGCAGTATGCGTA
TATCTATGACGTTGTGGAGGAGGTTGAAGGGTCTGATGTCGTTGAGAATC
TTATGGAGCCGCCGAGGATTGGACATCGGTTTTCGGGGGGTGAAGAAGGG
GAGGCTTGTTCTGAGTGAATGTCTCTCGGCAGACATGCCTACAGGCATGC
ATCATCATCGTCTAATAATCTCCTCGATCACGTCTGGATCAGCGAGGACT
TCCTAGCTTCCGCGTTCCGACGCTTCGCTAACGGCCAACGACGCTACGAG
AGCCGCGTCCCGGGGCCATTGGAGGCTCGACGACGACTCGCTAAGAGGAG
GAATACTGCCCTCGCTGGGATTGCGGGGACGGGGCCGCTGGATGATTTTG
CTTGTTTGTTTGGGCGCAATGGGAGGGAACATATGAAATGGACGACCACG
ACGGAGGGGAGGAAGGCGAAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002518-T1.utr3p1 | KJC3_002518-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002518-T1.utr5p1 | KJC3_002518-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:2785160..2787673 - |
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