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KJC3_002519-T1, KJC3_002519-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002519-T1
Unique NameKJC3_002519-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2788037..2789949-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002519-T1 ID=KJC3_002519-T1|Name=KJC3_002519-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1913bp|location=Sequence derived from alignment at ch2:2788037..2789949- (Aspergillus niger KJC3)
TGCTGGGATTGAATTTCTCATATTATTTCCTTATGAGATATCGTTTTTAT
TTTTAAACCAACTCACCCTCGTCGAGCATCCACTAAGTAAGTCGCCTTAC
CGAGCCCTGGGCCTGGATACTACCTGCGTACTACCATTCCCACCCCCACT
CGGACGCTGGCCTCATAAGCCCCAGTTTCCCAAGTCCCCTGGTACGCATA
ATGCCTACGGGTAGATCAACTGTGAGCACTCCCCTACTTGAATCCCTGAC
AAGGTCCAATCTCTTCTGTTGGTTGTGGTGGTGGTGGTCTTTTCTCCAAC
TCTTTGCTGTTGCTCTTGGTCGCCGTCTACATTGTTCTTTCGATCGGCAA
CCTTCTAGTATTCACTAACACACCATGTCGCAGGGATCTAGTCGTGAAGA
GTAAGTACTGTCATTTCCAAAGAATAAGCCAGAGGTGCAGACCTGCTTGG
TTACTCGCATCTTCACTTCTATTGGTGGTGTCAGTGCTAAATGTGACAAT
AGTGACACGCAGTCATTGACTGCCAGTGTAACGGACTACCCCATGGAATA
TGGAAGACGATACCACAAATATCATGAGGGCTGTATGTGCAGGCCTCTTC
GATCTATTGGAGTCAGCCTCCTCGTCCCTTACTAAATCACTCTTTCCCCA
GCATACTTATATCCCAACGACGAGCAAGAGCTAGACCGTATGGACATGCA
ACACCACATGCTCAAATTGGTCAACCGCGGGCGGCTGCTCTTTGCCTCTC
CCCAAAGCCCAAAGAGGATCCTAGATGTTGGCACTGGCTCCGGTATATGG
CCCATAGAACTAGGTAAGCGAAAAGAAAAGCTCTTTCCCCCCCCATCCTC
CCCAGCTCATCTTACCGGACAGTTTCTCATCGTGTCTCCATCACATGTAG
CGTCTGAATTCCCAGCAGCCGAGATTATAGGAACCGATCTTTCGCCTGTA
CAACCGAACGAAGTCCCCGAGAACGTCCATTTCCTAGTCGATGACGTTAC
AGAGGACGAGTGGCTATGGGGCCCCAACCACTTCGACGTCATCCATGCTG
GTCATCTTTCGGGTTCTCTGCCATCATATAAAGACTTGTTACGGAAAGTC
TTCAAGCATCTCAAGCCTGGTGGCAGCGTCCAATGTGATGAGTTTGATCC
GAAGCCGAAATGCGATGACGGAACCATGCCAGAAGAGGATCCCGATAAGT
TCAGTGAATACGCTCTCCAAGACCTGATGGATCTACATCACCGTGCCGGC
CAGGCTTCAGACCCGCCCCGGCAGTTTCGAGTGGCCCATCGGTTGGCACG
CTGGATGAGAGAAGTAGGATTCGAGGATGTTCAGGAGCGAGTCCAAAAAG
TACCCGTGAACCCTTGGTCTACCGACTCTCATCTGAGAACGATTGGTTCG
TGGAACGAGACAAACCTGCTGGAAGCCGCAGCTGGCTGGTCTTACAAGCC
TCTCACGATTCTTGGCTGGTCGAAGCCCGAGATCGAAGTCTTCCTCGTCG
ATGTTCGGAAATCCATTCAGAACCGTGATGTTCACGCCTATTTGGATTAC
TATGTGGTCACAGGAAGAAAACCACATCCTGCTTAGTGAGAGAGCCCTTG
AAGGGTTTCACTGCGAATTTTACGGCCTCGAAAGAAAAGCACCACATAGC
AGATAACGTCCTTTTTGGATTATCGTTCCTTAGCGTCTATACCTCCTTTT
TCCGTCATCGCCGGATCTGTCCTTATTTTCATCTACCATTTCCTTGTGTG
TTGGCAAGCATTGGCATAAGATACCACCGACTACTACAGAGAAACATCAT
ATATGCATAGAAGGCGTGCAGGGGCCTCCTTTTCTTTTCATATTCTTTTT
TCCACTTTTCTATTCTTGCACATATATAAATACATCCGACATAATTTGTC
TAGTCATTCCCCT
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Coding sequence (CDS) from alignment at ch2:2788037..2789949-

>KJC3_002519-T1 ID=KJC3_002519-T1|Name=KJC3_002519-T1|organism=Aspergillus niger KJC3|type=CDS|length=3816bp|location=Sequence derived from alignment at ch2:2788037..2789949- (Aspergillus niger KJC3)
CGTCTGAATTCCCAGCAGCCGAGATTATAGGAACCGATCTTTCGCCTGTA
CAACCGAACGAAGTCCCCGAGAACGTCCATTTCCTAGTCGATGACGTTAC
AGAGGACGAGTGGCTATGGGGCCCCAACCACTTCGACGTCATCCATGCTG
GTCATCTTTCGGGTTCTCTGCCATCATATAAAGACTTGTTACGGAAAGTC
TTCAAGCATCTCAAGCCTGGTGGCAGCGTCCAATGTGATGAGTTTGATCC
GAAGCCGAAATGCGATGACGGAACCATGCCAGAAGAGGATCCCGATAAGT
TCAGTGAATACGCTCTCCAAGACCTGATGGATCTACATCACCGTGCCGGC
CAGGCTTCAGACCCGCCCCGGCAGTTTCGAGTGGCCCATCGGTTGGCACG
CTGGATGAGAGAAGTAGGATTCGAGGATGTTCAGGAGCGAGTCCAAAAAG
TACCCGTGAACCCTTGGTCTACCGACTCTCATCTGAGAACGATTGGTTCG
TGGAACGAGACAAACCTGCTGGAAGCCGCAGCTGGCTGGTCTTACAAGCC
TCTCACGATTCTTGGCTGGTCGAAGCCCGAGATCGAAGTCTTCCTCGTCG
ATGTTCGGAAATCCATTCAGAACCGTGATGTTCACGCCTATTTGGATTAC
TATGTGGTCACAGGAAGAAAACCACATCCTGCTTAGCATACTTATATCCC
AACGACGAGCAAGAGCTAGACCGTATGGACATGCAACACCACATGCTCAA
ATTGGTCAACCGCGGGCGGCTGCTCTTTGCCTCTCCCCAAAGCCCAAAGA
GGATCCTAGATGTTGGCACTGGCTCCGGTATATGGCCCATAGAACTAGTG
ACACGCAGTCATTGACTGCCAGTGTAACGGACTACCCCATGGAATATGGA
AGACGATACCACAAATATCATGAGGGCTATGTCGCAGGGATCTAGTCGTG
AAGACGTCTGAATTCCCAGCAGCCGAGATTATAGGAACCGATCTTTCGCC
TGTACAACCGAACGAAGTCCCCGAGAACGTCCATTTCCTAGTCGATGACG
TTACAGAGGACGAGTGGCTATGGGGCCCCAACCACTTCGACGTCATCCAT
GCTGGTCATCTTTCGGGTTCTCTGCCATCATATAAAGACTTGTTACGGAA
AGTCTTCAAGCATCTCAAGCCTGGTGGCAGCGTCCAATGTGATGAGTTTG
ATCCGAAGCCGAAATGCGATGACGGAACCATGCCAGAAGAGGATCCCGAT
AAGTTCAGTGAATACGCTCTCCAAGACCTGATGGATCTACATCACCGTGC
CGGCCAGGCTTCAGACCCGCCCCGGCAGTTTCGAGTGGCCCATCGGTTGG
CACGCTGGATGAGAGAAGTAGGATTCGAGGATGTTCAGGAGCGAGTCCAA
AAAGTACCCGTGAACCCTTGGTCTACCGACTCTCATCTGAGAACGATTGG
TTCGTGGAACGAGACAAACCTGCTGGAAGCCGCAGCTGGCTGGTCTTACA
AGCCTCTCACGATTCTTGGCTGGTCGAAGCCCGAGATCGAAGTCTTCCTC
GTCGATGTTCGGAAATCCATTCAGAACCGTGATGTTCACGCCTATTTGGA
TTACTATGTGGTCACAGGAAGAAAACCACATCCTGCTTAGCATACTTATA
TCCCAACGACGAGCAAGAGCTAGACCGTATGGACATGCAACACCACATGC
TCAAATTGGTCAACCGCGGGCGGCTGCTCTTTGCCTCTCCCCAAAGCCCA
AAGAGGATCCTAGATGTTGGCACTGGCTCCGGTATATGGCCCATAGAACT
AGTGACACGCAGTCATTGACTGCCAGTGTAACGGACTACCCCATGGAATA
TGGAAGACGATACCACAAATATCATGAGGGCTATGTCGCAGGGATCTAGT
CGTGAAGACGTCTGAATTCCCAGCAGCCGAGATTATAGGAACCGATCTTT
CGCCTGTACAACCGAACGAAGTCCCCGAGAACGTCCATTTCCTAGTCGAT
GACGTTACAGAGGACGAGTGGCTATGGGGCCCCAACCACTTCGACGTCAT
CCATGCTGGTCATCTTTCGGGTTCTCTGCCATCATATAAAGACTTGTTAC
GGAAAGTCTTCAAGCATCTCAAGCCTGGTGGCAGCGTCCAATGTGATGAG
TTTGATCCGAAGCCGAAATGCGATGACGGAACCATGCCAGAAGAGGATCC
CGATAAGTTCAGTGAATACGCTCTCCAAGACCTGATGGATCTACATCACC
GTGCCGGCCAGGCTTCAGACCCGCCCCGGCAGTTTCGAGTGGCCCATCGG
TTGGCACGCTGGATGAGAGAAGTAGGATTCGAGGATGTTCAGGAGCGAGT
CCAAAAAGTACCCGTGAACCCTTGGTCTACCGACTCTCATCTGAGAACGA
TTGGTTCGTGGAACGAGACAAACCTGCTGGAAGCCGCAGCTGGCTGGTCT
TACAAGCCTCTCACGATTCTTGGCTGGTCGAAGCCCGAGATCGAAGTCTT
CCTCGTCGATGTTCGGAAATCCATTCAGAACCGTGATGTTCACGCCTATT
TGGATTACTATGTGGTCACAGGAAGAAAACCACATCCTGCTTAGCATACT
TATATCCCAACGACGAGCAAGAGCTAGACCGTATGGACATGCAACACCAC
ATGCTCAAATTGGTCAACCGCGGGCGGCTGCTCTTTGCCTCTCCCCAAAG
CCCAAAGAGGATCCTAGATGTTGGCACTGGCTCCGGTATATGGCCCATAG
AACTAGTGACACGCAGTCATTGACTGCCAGTGTAACGGACTACCCCATGG
AATATGGAAGACGATACCACAAATATCATGAGGGCTATGTCGCAGGGATC
TAGTCGTGAAGACGTCTGAATTCCCAGCAGCCGAGATTATAGGAACCGAT
CTTTCGCCTGTACAACCGAACGAAGTCCCCGAGAACGTCCATTTCCTAGT
CGATGACGTTACAGAGGACGAGTGGCTATGGGGCCCCAACCACTTCGACG
TCATCCATGCTGGTCATCTTTCGGGTTCTCTGCCATCATATAAAGACTTG
TTACGGAAAGTCTTCAAGCATCTCAAGCCTGGTGGCAGCGTCCAATGTGA
TGAGTTTGATCCGAAGCCGAAATGCGATGACGGAACCATGCCAGAAGAGG
ATCCCGATAAGTTCAGTGAATACGCTCTCCAAGACCTGATGGATCTACAT
CACCGTGCCGGCCAGGCTTCAGACCCGCCCCGGCAGTTTCGAGTGGCCCA
TCGGTTGGCACGCTGGATGAGAGAAGTAGGATTCGAGGATGTTCAGGAGC
GAGTCCAAAAAGTACCCGTGAACCCTTGGTCTACCGACTCTCATCTGAGA
ACGATTGGTTCGTGGAACGAGACAAACCTGCTGGAAGCCGCAGCTGGCTG
GTCTTACAAGCCTCTCACGATTCTTGGCTGGTCGAAGCCCGAGATCGAAG
TCTTCCTCGTCGATGTTCGGAAATCCATTCAGAACCGTGATGTTCACGCC
TATTTGGATTACTATGTGGTCACAGGAAGAAAACCACATCCTGCTTAGCA
TACTTATATCCCAACGACGAGCAAGAGCTAGACCGTATGGACATGCAACA
CCACATGCTCAAATTGGTCAACCGCGGGCGGCTGCTCTTTGCCTCTCCCC
AAAGCCCAAAGAGGATCCTAGATGTTGGCACTGGCTCCGGTATATGGCCC
ATAGAACTAGTGACACGCAGTCATTGACTGCCAGTGTAACGGACTACCCC
ATGGAATATGGAAGACGATACCACAAATATCATGAGGGCTATGTCGCAGG
GATCTAGTCGTGAAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002519KJC3_002519Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002519-T1KJC3_002519-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002519-T1.cdsKJC3_002519-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002519-T1.utr3p1KJC3_002519-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002519-T1.exon4KJC3_002519-T1.exon4Aspergillus niger KJC3exon
KJC3_002519-T1.exon3KJC3_002519-T1.exon3Aspergillus niger KJC3exon
KJC3_002519-T1.exon2KJC3_002519-T1.exon2Aspergillus niger KJC3exon
KJC3_002519-T1.exon1KJC3_002519-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002519-T1.utr5p1KJC3_002519-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2788037..2789949 -
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