You are here

Home

KJC3_002521-T1, KJC3_002521-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002521-T1
Unique NameKJC3_002521-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2799443..2801460-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002521-T1 ID=KJC3_002521-T1|Name=KJC3_002521-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2018bp|location=Sequence derived from alignment at ch2:2799443..2801460- (Aspergillus niger KJC3)
TGTCTGGCGCGCTCAAAAGTTCCCTCCTGTTGCCGTTCAACGGGATCTGA
GGTGCCTTTATTAATACCAAAAAGATATCAACCAGCTGTCATGGCCTACC
TGACCTGTACCAGCCCTAAAGAAGCCCTTCATTTCCCTGCTTTACTAGCA
GAGACTGCCTAGCAACCAAATCTCAGCCAAACGGAGAGCCAGAACAACAG
GGGAACGAACCAGCGGAAAAGGAGGGAAAGGAACCATGAGTGCAGCTTGA
CGATTTGACACATAATGGGCGATTATTATTGGCAGACCACCCATTCATAC
TTGATCGACTTACCCATGCTGCTGATTGAGTTCAGTATTGCGTCACTACA
GGACTCCGGGGAGCACCAACCATCCACCTATCTAAAATAATGGACTCCTC
CATTCTTACCATCAGCAGTGGCAGAACCACTTCTACCACCTCTATTACCT
CTCTGATCATCAAGATTTTCTTATTCAATTCAACCGCAATCTCTCCTCTC
AGAAAGCGCCGCCGAAGAGCGCACGCCTCACCCACTCCGCCACCACGAGC
CCCGAATCACAGGAACCATGCTCACGAGATCCTTAAGACCCAAGGGAACC
CTCCGCTGGACACGTCCAGGCCTGCCATACCGGCGGTGTTTGGCCCATGT
CTCGAACGTCTCGGACCTCCCTACAGTGCGTTGCAGCCCACGCCCAGTTC
ACCATCTGACCCCGATCCACCTATGCCAGGATACAGAACTAACCCCTCCC
TTATAGGAGGAAAACAAGCCTTTTAGCGTACCGATAGCAGACGACAGTTT
CGAAACATACAACCTCGACCCTCCCCCCTACAGCCTGGAAACCACCAAAA
GCCAACTAAAACAACTTTACTATGACATGTCGCTAATAAGGTCTCTTTCC
ATCCCCTTCCAATCATATTCGTCCTGGACCCCCAAATTAACTTTCCCAGA
CGCATGGAACTCGCAGCCGACAAGTTATACAAGGAACAAAAGATCCGTGG
CTTTTGCCACCTCTCCACAGGCCAAGAGGCTGTCGCGGTGGGGGTAGAAC
ACGGGATCAGCCCCGAAGACAAGGTTATCACTGCGTACCGCGCCCACGGA
TTCACTTTGATGCGGGGTGGGAGTGTCAAATCCATCATTGGAGAGTTACT
CGGTCGCCGAGATGGCATTTGTCATGGAAAGGGCGGTTCGGTGCATATGT
TTACAAAGAACTTCTTTGGTGGGAATGGGATTGTAGGGTCGAATGTACCC
CTGGGGACAGGAATTGCGTTCGCGCAGCAGTATGATGATACTAAGAAGGT
GACGGTGAACCTTTATGGAGATGGCGCTGCGAATCAGGGTCAGGTACATG
AGGCGTATAACATGGCTAAGCTGTGGGAATTGCCTGTTATATTTGGCTGC
GAGAGTGAGTTCGGTTGATTTCCAAATTTTTTCTCGGTTATCTTTCATCA
GTTGTTCTTGTGTTATGTTGGATCACCCGGGACTCATTTTCTAATGCCAT
GTCTTGTCGCAGATAATAAATACGGAATGGGCACATCCGTGGAGCGCGCT
TCCGCCATGACCGAATACTACAAACGAGGATATTACATTCCCGGTCTACG
CATCAACGGAATGGACGTTCTGGCCGTAATTGCAGCAATGAAGTATGGCA
AAGACTACGTGTTGGGCGGAAATGGACCTTTGCTGTACGAATTCCAAACA
TACCGGTATGCGGGACACTCGGTATCTGATCCGGGGACGGCGTACCGGAG
CAGAGACGAAGTGCAGGCTGAGCGGGCCAATGACCCTATCACGACTTATC
GAGAAAAGATGATTGAATGGGGTGTGCTCAGCGAGGACGATGTTAAGACG
ATGGATAAGGAGATCCGAAGCAAAGTTGACCGCGAAGCTCAGGAAGCGGA
GAAGATGGCGGAACCACCTTTGAATTCTGATGTGTTGTTCGAGGATATTT
ATGTTCGTGGTAGCGAGCCAGCCCAGCGGCGCGGGAGAACCGTTGATGAG
ACATACTACCGGGGTTGA
back to top

Coding sequence (CDS) from alignment at ch2:2799443..2801460-

>KJC3_002521-T1 ID=KJC3_002521-T1|Name=KJC3_002521-T1|organism=Aspergillus niger KJC3|type=CDS|length=4812bp|location=Sequence derived from alignment at ch2:2799443..2801460- (Aspergillus niger KJC3)
ATAATAAATACGGAATGGGCACATCCGTGGAGCGCGCTTCCGCCATGACC
GAATACTACAAACGAGGATATTACATTCCCGGTCTACGCATCAACGGAAT
GGACGTTCTGGCCGTAATTGCAGCAATGAAGTATGGCAAAGACTACGTGT
TGGGCGGAAATGGACCTTTGCTGTACGAATTCCAAACATACCGGTATGCG
GGACACTCGGTATCTGATCCGGGGACGGCGTACCGGAGCAGAGACGAAGT
GCAGGCTGAGCGGGCCAATGACCCTATCACGACTTATCGAGAAAAGATGA
TTGAATGGGGTGTGCTCAGCGAGGACGATGTTAAGACGATGGATAAGGAG
ATCCGAAGCAAAGTTGACCGCGAAGCTCAGGAAGCGGAGAAGATGGCGGA
ACCACCTTTGAATTCTGATGTGTTGTTCGAGGATATTTATGTTCGTGGTA
GCGAGCCAGCCCAGCGGCGCGGGAGAACCGTTGATGAGACATACTACCGG
GGTTGAACGCATGGAACTCGCAGCCGACAAGTTATACAAGGAACAAAAGA
TCCGTGGCTTTTGCCACCTCTCCACAGGCCAAGAGGCTGTCGCGGTGGGG
GTAGAACACGGGATCAGCCCCGAAGACAAGGTTATCACTGCGTACCGCGC
CCACGGATTCACTTTGATGCGGGGTGGGAGTGTCAAATCCATCATTGGAG
AGTTACTCGGTCGCCGAGATGGCATTTGTCATGGAAAGGGCGGTTCGGTG
CATATGTTTACAAAGAACTTCTTTGGTGGGAATGGGATTGTAGGGTCGAA
TGTACCCCTGGGGACAGGAATTGCGTTCGCGCAGCAGTATGATGATACTA
AGAAGGTGACGGTGAACCTTTATGGAGATGGCGCTGCGAATCAGGGTCAG
GTACATGAGGCGTATAACATGGCTAAGCTGTGGGAATTGCCTGTTATATT
TGGCTGCGAGAGAGGAAAACAAGCCTTTTAGCGTACCGATAGCAGACGAC
AGTTTCGAAACATACAACCTCGACCCTCCCCCCTACAGCCTGGAAACCAC
CAAAAGCCAACTAAAACAACTTTACTATGACATGTCGCTAATAAGATGCT
CACGAGATCCTTAAGACCCAAGGGAACCCTCCGCTGGACACGTCCAGGCC
TGCCATACCGGCGGTGTTTGGCCCATGTCTCGAACGTCTCGGACCTCCCT
ACAATAATAAATACGGAATGGGCACATCCGTGGAGCGCGCTTCCGCCATG
ACCGAATACTACAAACGAGGATATTACATTCCCGGTCTACGCATCAACGG
AATGGACGTTCTGGCCGTAATTGCAGCAATGAAGTATGGCAAAGACTACG
TGTTGGGCGGAAATGGACCTTTGCTGTACGAATTCCAAACATACCGGTAT
GCGGGACACTCGGTATCTGATCCGGGGACGGCGTACCGGAGCAGAGACGA
AGTGCAGGCTGAGCGGGCCAATGACCCTATCACGACTTATCGAGAAAAGA
TGATTGAATGGGGTGTGCTCAGCGAGGACGATGTTAAGACGATGGATAAG
GAGATCCGAAGCAAAGTTGACCGCGAAGCTCAGGAAGCGGAGAAGATGGC
GGAACCACCTTTGAATTCTGATGTGTTGTTCGAGGATATTTATGTTCGTG
GTAGCGAGCCAGCCCAGCGGCGCGGGAGAACCGTTGATGAGACATACTAC
CGGGGTTGAACGCATGGAACTCGCAGCCGACAAGTTATACAAGGAACAAA
AGATCCGTGGCTTTTGCCACCTCTCCACAGGCCAAGAGGCTGTCGCGGTG
GGGGTAGAACACGGGATCAGCCCCGAAGACAAGGTTATCACTGCGTACCG
CGCCCACGGATTCACTTTGATGCGGGGTGGGAGTGTCAAATCCATCATTG
GAGAGTTACTCGGTCGCCGAGATGGCATTTGTCATGGAAAGGGCGGTTCG
GTGCATATGTTTACAAAGAACTTCTTTGGTGGGAATGGGATTGTAGGGTC
GAATGTACCCCTGGGGACAGGAATTGCGTTCGCGCAGCAGTATGATGATA
CTAAGAAGGTGACGGTGAACCTTTATGGAGATGGCGCTGCGAATCAGGGT
CAGGTACATGAGGCGTATAACATGGCTAAGCTGTGGGAATTGCCTGTTAT
ATTTGGCTGCGAGAGAGGAAAACAAGCCTTTTAGCGTACCGATAGCAGAC
GACAGTTTCGAAACATACAACCTCGACCCTCCCCCCTACAGCCTGGAAAC
CACCAAAAGCCAACTAAAACAACTTTACTATGACATGTCGCTAATAAGAT
GCTCACGAGATCCTTAAGACCCAAGGGAACCCTCCGCTGGACACGTCCAG
GCCTGCCATACCGGCGGTGTTTGGCCCATGTCTCGAACGTCTCGGACCTC
CCTACAATAATAAATACGGAATGGGCACATCCGTGGAGCGCGCTTCCGCC
ATGACCGAATACTACAAACGAGGATATTACATTCCCGGTCTACGCATCAA
CGGAATGGACGTTCTGGCCGTAATTGCAGCAATGAAGTATGGCAAAGACT
ACGTGTTGGGCGGAAATGGACCTTTGCTGTACGAATTCCAAACATACCGG
TATGCGGGACACTCGGTATCTGATCCGGGGACGGCGTACCGGAGCAGAGA
CGAAGTGCAGGCTGAGCGGGCCAATGACCCTATCACGACTTATCGAGAAA
AGATGATTGAATGGGGTGTGCTCAGCGAGGACGATGTTAAGACGATGGAT
AAGGAGATCCGAAGCAAAGTTGACCGCGAAGCTCAGGAAGCGGAGAAGAT
GGCGGAACCACCTTTGAATTCTGATGTGTTGTTCGAGGATATTTATGTTC
GTGGTAGCGAGCCAGCCCAGCGGCGCGGGAGAACCGTTGATGAGACATAC
TACCGGGGTTGAACGCATGGAACTCGCAGCCGACAAGTTATACAAGGAAC
AAAAGATCCGTGGCTTTTGCCACCTCTCCACAGGCCAAGAGGCTGTCGCG
GTGGGGGTAGAACACGGGATCAGCCCCGAAGACAAGGTTATCACTGCGTA
CCGCGCCCACGGATTCACTTTGATGCGGGGTGGGAGTGTCAAATCCATCA
TTGGAGAGTTACTCGGTCGCCGAGATGGCATTTGTCATGGAAAGGGCGGT
TCGGTGCATATGTTTACAAAGAACTTCTTTGGTGGGAATGGGATTGTAGG
GTCGAATGTACCCCTGGGGACAGGAATTGCGTTCGCGCAGCAGTATGATG
ATACTAAGAAGGTGACGGTGAACCTTTATGGAGATGGCGCTGCGAATCAG
GGTCAGGTACATGAGGCGTATAACATGGCTAAGCTGTGGGAATTGCCTGT
TATATTTGGCTGCGAGAGAGGAAAACAAGCCTTTTAGCGTACCGATAGCA
GACGACAGTTTCGAAACATACAACCTCGACCCTCCCCCCTACAGCCTGGA
AACCACCAAAAGCCAACTAAAACAACTTTACTATGACATGTCGCTAATAA
GATGCTCACGAGATCCTTAAGACCCAAGGGAACCCTCCGCTGGACACGTC
CAGGCCTGCCATACCGGCGGTGTTTGGCCCATGTCTCGAACGTCTCGGAC
CTCCCTACAATAATAAATACGGAATGGGCACATCCGTGGAGCGCGCTTCC
GCCATGACCGAATACTACAAACGAGGATATTACATTCCCGGTCTACGCAT
CAACGGAATGGACGTTCTGGCCGTAATTGCAGCAATGAAGTATGGCAAAG
ACTACGTGTTGGGCGGAAATGGACCTTTGCTGTACGAATTCCAAACATAC
CGGTATGCGGGACACTCGGTATCTGATCCGGGGACGGCGTACCGGAGCAG
AGACGAAGTGCAGGCTGAGCGGGCCAATGACCCTATCACGACTTATCGAG
AAAAGATGATTGAATGGGGTGTGCTCAGCGAGGACGATGTTAAGACGATG
GATAAGGAGATCCGAAGCAAAGTTGACCGCGAAGCTCAGGAAGCGGAGAA
GATGGCGGAACCACCTTTGAATTCTGATGTGTTGTTCGAGGATATTTATG
TTCGTGGTAGCGAGCCAGCCCAGCGGCGCGGGAGAACCGTTGATGAGACA
TACTACCGGGGTTGAACGCATGGAACTCGCAGCCGACAAGTTATACAAGG
AACAAAAGATCCGTGGCTTTTGCCACCTCTCCACAGGCCAAGAGGCTGTC
GCGGTGGGGGTAGAACACGGGATCAGCCCCGAAGACAAGGTTATCACTGC
GTACCGCGCCCACGGATTCACTTTGATGCGGGGTGGGAGTGTCAAATCCA
TCATTGGAGAGTTACTCGGTCGCCGAGATGGCATTTGTCATGGAAAGGGC
GGTTCGGTGCATATGTTTACAAAGAACTTCTTTGGTGGGAATGGGATTGT
AGGGTCGAATGTACCCCTGGGGACAGGAATTGCGTTCGCGCAGCAGTATG
ATGATACTAAGAAGGTGACGGTGAACCTTTATGGAGATGGCGCTGCGAAT
CAGGGTCAGGTACATGAGGCGTATAACATGGCTAAGCTGTGGGAATTGCC
TGTTATATTTGGCTGCGAGAGAGGAAAACAAGCCTTTTAGCGTACCGATA
GCAGACGACAGTTTCGAAACATACAACCTCGACCCTCCCCCCTACAGCCT
GGAAACCACCAAAAGCCAACTAAAACAACTTTACTATGACATGTCGCTAA
TAAGATGCTCACGAGATCCTTAAGACCCAAGGGAACCCTCCGCTGGACAC
GTCCAGGCCTGCCATACCGGCGGTGTTTGGCCCATGTCTCGAACGTCTCG
GACCTCCCTACA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Biological Process
TermDefinition
GO:0006086acetyl-CoA biosynthetic process from pyruvate
Vocabulary: Molecular Function
TermDefinition
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002521KJC3_002521Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002521-T1KJC3_002521-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002521-T1.cdsKJC3_002521-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002521-T1.exon4KJC3_002521-T1.exon4Aspergillus niger KJC3exon
KJC3_002521-T1.exon3KJC3_002521-T1.exon3Aspergillus niger KJC3exon
KJC3_002521-T1.exon2KJC3_002521-T1.exon2Aspergillus niger KJC3exon
KJC3_002521-T1.exon1KJC3_002521-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002521-T1.utr5p1KJC3_002521-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262Q8D
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR017597
DBxrefInterPro:IPR001017
DBxrefPFAM:PF00676
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2799443..2801460 -
Powered by Drupal