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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2803960..2805366+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002523-T1 ID=KJC3_002523-T1|Name=KJC3_002523-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1407bp|location=Sequence derived from alignment at ch2:2803960..2805366+ (Aspergillus niger KJC3)
GCCCTCCAACTTCATCTGATATCCCTCTCTGATTCTGTCCACCTTCCGCA
GTCATGGATGTAGCCTATGACCACATCCAAGAGGAGATCTTCTCCTCCAA
CGATTCCGCCAAGAAAGAAAACAACAGCAACAACAATAACAACCCCTCCG
ATGCACCCGCCACCAACTCAGACCGCCCCAATGTCGACCTTAACGCCGAA
CTGCAGGAAACCTTCCGCGCTTTCTCCGCGAGTCCCTGGGGTGCACGCAT
CGGCGGGCTCTGGGACAATGTCCGCAAACAAGGCGAAAGCTATTACGAAG
GCGCTCGCCAGGAGTACGCCGCCGCCAGCGAAGAAGCCGCCAAGGGGTTC
TCGGATCTGAAGAGTAGCATCGTCGGGCGCACGCGGGGGTTGTCCCTGAG
CACAGCTTTCAACAATAATATCATCGGCGCTGGCAGCAGTACAACAACTG
AACAGGAGACGGAAACATCGTCATCTACGCCCAAGAATGAGGCCGAAGAG
AAGGAGAAGGCTGGACCTTCTGCCAGCTCGGATAACAGTAATGAGGGGTT
CCTCTCGCGGTTCAAGGCTGAGGCCGCCCGCCGACTTAAGGAGATCGAAA
AGGCAGAGGAAGCAGCCGACGAAGCTATCCTGCGCTTTGGGATGAATATT
GGACAGAAATTGAAGGATGCAGTTAGCATTGTGCCGCCGTCTACGGAGTC
GTCGTCGGATAAGCTACTGTTTGAAAGTAAGGATGCAGATGGGAAGCGCG
TTATCCATGCTACGCGGTTCGAGGCGCAGCTTCATGTCATCCATTCGAAT
TTGGAGAGTTTTTCGAAGGACCCCGTGAGTGATGAGTGGCCTGCTTTCAA
GCAGTCCTTCAATGTGGACGATAAGACGGATGCTATTGCCGCCGACTTGG
AGAAGTATCCGGAGCTGCGCTCCGCCATGGAGAAGCTTGTTCCCGAGAAG
GTGGAATACGCGGTCTTCTGGTGCCGGTACTATTTCTTGCGTTTGGTTAT
TGAGACTGAGGAGCAGAAGCGGAAGGAGCTTCTTAAGGGTATGTTCATTT
CCTTTTCTCCCCCTTCCCCATATATGCTATGGCTCTTCTCTAACTTGTCC
CATAGATGTCAACGTCGATGAGGAAGAAGTCAAGTGGGATGATGATTCCG
ACGACGACACCGACTCTCCCTCTACGCCTCAAGTCCAGCAATCTACCTCA
ACCACCAAGGCCACCTCTGCCACCCCTACTGCCACTGCTACCGAGAAGGA
TACCCTGAAGCCCACAGAACCCCGCCGGTCCAACGACCAACAGTCCCAGC
CCGACAGCGAATCCAGCTACGACCTCGTCAGCGGTGCGACCAGCCGCACT
CCTGCCAGTCCCAAGGAAAAGGCCAAGGACGAGGAAAGCGATGACGACTG
GGAGTAA back to topCoding sequence (CDS) from alignment at ch2:2803960..2805366+ >KJC3_002523-T1 ID=KJC3_002523-T1|Name=KJC3_002523-T1|organism=Aspergillus niger KJC3|type=CDS|length=2574bp|location=Sequence derived from alignment at ch2:2803960..2805366+ (Aspergillus niger KJC3)
ATGGATGTAGCCTATGACCACATCCAAGAGGAGATCTTCTCCTCCAACGA
TTCCGCCAAGAAAGAAAACAACAGCAACAACAATAACAACCCCTCCGATG
CACCCGCCACCAACTCAGACCGCCCCAATGTCGACCTTAACGCCGAACTG
CAGGAAACCTTCCGCGCTTTCTCCGCGAGTCCCTGGGGTGCACGCATCGG
CGGGCTCTGGGACAATGTCCGCAAACAAGGCGAAAGCTATTACGAAGGCG
CTCGCCAGGAGTACGCCGCCGCCAGCGAAGAAGCCGCCAAGGGGTTCTCG
GATCTGAAGAGTAGCATCGTCGGGCGCACGCGGGGGTTGTCCCTGAGCAC
AGCTTTCAACAATAATATCATCGGCGCTGGCAGCAGTACAACAACTGAAC
AGGAGACGGAAACATCGTCATCTACGCCCAAGAATGAGGCCGAAGAGAAG
GAGAAGGCTGGACCTTCTGCCAGCTCGGATAACAGTAATGAGGGGTTCCT
CTCGCGGTTCAAGGCTGAGGCCGCCCGCCGACTTAAGGAGATCGAAAAGG
CAGAGGAAGCAGCCGACGAAGCTATCCTGCGCTTTGGGATGAATATTGGA
CAGAAATTGAAGGATGCAGTTAGCATTGTGCCGCCGTCTACGGAGTCGTC
GTCGGATAAGCTACTGTTTGAAAGTAAGGATGCAGATGGGAAGCGCGTTA
TCCATGCTACGCGGTTCGAGGCGCAGCTTCATGTCATCCATTCGAATTTG
GAGAGTTTTTCGAAGGACCCCGTGAGTGATGAGTGGCCTGCTTTCAAGCA
GTCCTTCAATGTGGACGATAAGACGGATGCTATTGCCGCCGACTTGGAGA
AGTATCCGGAGCTGCGCTCCGCCATGGAGAAGCTTGTTCCCGAGAAGGTG
GAATACGCGGTCTTCTGGTGCCGGTACTATTTCTTGCGTTTGGTTATTGA
GACTGAGGAGCAGAAGCGGAAGGAGCTTCTTAAGGATGTCAACGTCGATG
AGGAAGAAGTCAAGTGGGATGATGATTCCGACGACGACACCGACTCTCCC
TCTACGCCTCAAGTCCAGCAATCTACCTCAACCACCAAGGCCACCTCTGC
CACCCCTACTGCCACTGCTACCGAGAAGGATACCCTGAAGCCCACAGAAC
CCCGCCGGTCCAACGACCAACAGTCCCAGCCCGACAGCGAATCCAGCTAC
GACCTCGTCAGCGGTGCGACCAGCCGCACTCCTGCCAGTCCCAAGGAAAA
GGCCAAGGACGAGGAAAGCGATGACGACTGGGAGTAAATGGATGTAGCCT
ATGACCACATCCAAGAGGAGATCTTCTCCTCCAACGATTCCGCCAAGAAA
GAAAACAACAGCAACAACAATAACAACCCCTCCGATGCACCCGCCACCAA
CTCAGACCGCCCCAATGTCGACCTTAACGCCGAACTGCAGGAAACCTTCC
GCGCTTTCTCCGCGAGTCCCTGGGGTGCACGCATCGGCGGGCTCTGGGAC
AATGTCCGCAAACAAGGCGAAAGCTATTACGAAGGCGCTCGCCAGGAGTA
CGCCGCCGCCAGCGAAGAAGCCGCCAAGGGGTTCTCGGATCTGAAGAGTA
GCATCGTCGGGCGCACGCGGGGGTTGTCCCTGAGCACAGCTTTCAACAAT
AATATCATCGGCGCTGGCAGCAGTACAACAACTGAACAGGAGACGGAAAC
ATCGTCATCTACGCCCAAGAATGAGGCCGAAGAGAAGGAGAAGGCTGGAC
CTTCTGCCAGCTCGGATAACAGTAATGAGGGGTTCCTCTCGCGGTTCAAG
GCTGAGGCCGCCCGCCGACTTAAGGAGATCGAAAAGGCAGAGGAAGCAGC
CGACGAAGCTATCCTGCGCTTTGGGATGAATATTGGACAGAAATTGAAGG
ATGCAGTTAGCATTGTGCCGCCGTCTACGGAGTCGTCGTCGGATAAGCTA
CTGTTTGAAAGTAAGGATGCAGATGGGAAGCGCGTTATCCATGCTACGCG
GTTCGAGGCGCAGCTTCATGTCATCCATTCGAATTTGGAGAGTTTTTCGA
AGGACCCCGTGAGTGATGAGTGGCCTGCTTTCAAGCAGTCCTTCAATGTG
GACGATAAGACGGATGCTATTGCCGCCGACTTGGAGAAGTATCCGGAGCT
GCGCTCCGCCATGGAGAAGCTTGTTCCCGAGAAGGTGGAATACGCGGTCT
TCTGGTGCCGGTACTATTTCTTGCGTTTGGTTATTGAGACTGAGGAGCAG
AAGCGGAAGGAGCTTCTTAAGGATGTCAACGTCGATGAGGAAGAAGTCAA
GTGGGATGATGATTCCGACGACGACACCGACTCTCCCTCTACGCCTCAAG
TCCAGCAATCTACCTCAACCACCAAGGCCACCTCTGCCACCCCTACTGCC
ACTGCTACCGAGAAGGATACCCTGAAGCCCACAGAACCCCGCCGGTCCAA
CGACCAACAGTCCCAGCCCGACAGCGAATCCAGCTACGACCTCGTCAGCG
GTGCGACCAGCCGCACTCCTGCCAGTCCCAAGGAAAAGGCCAAGGACGAG
GAAAGCGATGACGACTGGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002523-T1.utr5p1 | KJC3_002523-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035925 |
| DBxref | InterPro:IPR005607 |
| DBxref | PFAM:PF03909 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2803960..2805366 + |
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