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KJC3_002525-T1, KJC3_002525-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002525-T1
Unique NameKJC3_002525-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2808676..2812613+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002525-T1 ID=KJC3_002525-T1|Name=KJC3_002525-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3938bp|location=Sequence derived from alignment at ch2:2808676..2812613+ (Aspergillus niger KJC3)
AGAAAATGAGCCTCCGCAAAGAAAAACGCCCCTCACTTGCCGCTGCGTTG
CTCTGCCTTTCATTGTTCGCTTCCTCTTCTTCTTCTTCTACCTCCCTCCC
CCCGACCTTCTCCTTATTCTTCTTTTAGACCAGTCCCTTTTCTATATACC
AGGGACTTTGCTTGGTGTTTGTCTTGTTGTCGTTCTCTTAGCGTCTTCCC
CACATACACCATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCT
CCAGACAGACTGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCT
CAGCCTCAGGCTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGG
CGCTGCTTCCTTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTT
TCCCGCAATATGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTAT
GACCAGCAGCAGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACC
TGGTGGCTTTAACAACAACCAGATCTACAACCAGCAATACGGTGGTTACC
AGCAGCAGCAACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAG
CCCGCTCAGCCCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAA
GGCCAAGGTCCTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCA
AGACCAAGGTTCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGC
ACGCCTTCTTCGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGC
TGCCGCTGTTGAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGA
AGACTGAGAAGAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCC
CCTACCCCCTCGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGG
CGAGGCTGCCAAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAAC
AAGCCGATGTCGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAG
GAGCACGTCAACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTAC
TTTGGGTGGATCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTT
TGGAGAAGTACAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTAC
CTCTCTTGGGCCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGAC
TGTTGAGGTTGGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACG
GCAGCACCATCACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAG
TCTTATGTTCACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGT
CCTTGTCATCTCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGG
GTGGTCAGACTCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAG
ACCCTTATCGTCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAG
CAAGGCTCGTTTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGA
ACCTCGGTTACAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAG
AGGACCACGGGTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTA
TGGCGGTCCCTCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGC
GTAAGATCAACGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGAC
ATGGGTACCATGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAA
CGGCAGCTGCATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTC
TCTATGGTGAGACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAG
GTCCGTCTTCGTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATT
CGTGCTCTGCTCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGG
CCAAGATCAGGATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAAC
TGCGTGATGCACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACT
TCTGCACAAGTGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTC
CTTTCGCTAGCAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGC
ACTGCTGGTGCCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGG
TCGGTTTACTCTGCGTGATCAGGTAAGCAGTCATTTCCAAAGTGCCATTA
TTGAACAATGCTAACATACACAAAACCAGGGTCAAACCGTTGCCATTGGT
ATGATTACCAAGCTCATCTCTGCCGAAGAGGTGGCGCAGGCGCAGGCGTA
AAGTGTGAATGTCTTTTCATTATAAATAGCAGTCCCTACGGTGGTCGGTG
GCGAGATCTAACGAGCTACGACTGTCGACCGGGAAGAATGGGCGGGAAAA
GGCTCGGTGATGATATCCCAATAGCAGCCTGGTTTGGTTGTTGCTGATGA
TGATGAATCTTGATGTTCCGTTTTATTCTATTTTGCTCCTTTCCTATAGA
TTTTGCATTCCCTTGCTTGTTGGTTTCGCAATAAAATTTTCATTGCTGTC
ATCTCACGCATTCTACTATCTTTCAGTATTTGGATAGTCAAAGGGATTCA
CTGCGCGCATGAATCACACAGCTGTAGCATAGGCAAACAGCCAGAATACA
TGAACAAGGCGTCTATTCTATGGGGAATCAACCAGCACCAGCACCAACAA
ACAACTTTTAACAATACCAAACAAAACAATCAATACCTTAGAAAGGAAAG
AAGATTACCTCCTCTTCTTCGAAACAACAGTCGTAAACCCATCCTCATCA
ACCTCGGGCTCAACCTTCTCCCTCGGCGCCCTCACCAACGCCGGCGCAGG
CGCATCATCCATCTCCATATCCCCGTCCTCATCCTCGCTATCATCGTCGT
CATCATCATCCTGATCCTCACCTCTCTGGAACCCCGCGATTTCCGAAGCC
CCCTTCTTACTCTGCCACTTCTCCCACATCTCCTGAATCGCCCCGAACTC
TCCCTTCTCCGTCTGCCCCTTCATCTCCATAATCTGCACGGCAACCATGC
CCGCGCTCTCATCATCCACCACGACGTCAAACTCATCATTCATCACTTGG
ATAAGCACATCCTCGAGATCCTCGGCGTCGGTCTCTGGGCGCTCCTGTAT
CATTTCGGAGATGGCGCCGCAGAGCCAGTCGCGCTTGTCGGAGGAGGTTG
GGCCGCCCCAGTTGGATTGCACAGCAAGGGTTAAGGCCGGCCAGGCGTTG
ATCGCGAGGGTTATGCCGAGGTCGAGGTACTGGGTTGCTGTCTGGGGGGG
TTGAGTGGTCATTTTTGCGTGCGGAAGGCGGGGTCGGAGGTGGGTGGTGT
TTTGGTTGTAGTTGGTTTTTGAGGGGTGTTGGGAGGAATTGGTGGAGTGC
GTGGGTACAGATTTGATTAAGAGTATTTCCTTGTGGAGTTTATATGTGAA
GTAGGGTTATTTGTATATTTGTGGACAGGGAAAATGATGGTGGTGCTGGT
CTGCGTCCTGAAATTTTTTTTGATATGGATGGGATTTACAGTTTGGGTGG
TTATCGGGGAGTTGATTAGATAGATAAGAGGTCATGTGATTGCTATGCGG
GAAGTTGGATTGTTGGATTGCAAGGTACTTGGTCGTTGGGGACCTTGCAG
GTTAGTCATACGTGGGTCGGGAATGTCAATGGTGATATTGAGGACATGAC
AGACATGGGATAGAATATTGGTCCTTTCTGGTGCCCGTGGTTGGCTGATA
TGAGGTGGGCAATGAATTGGTATACACGGGAAAGAAGG
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Coding sequence (CDS) from alignment at ch2:2808676..2812613+

>KJC3_002525-T1 ID=KJC3_002525-T1|Name=KJC3_002525-T1|organism=Aspergillus niger KJC3|type=CDS|length=4368bp|location=Sequence derived from alignment at ch2:2808676..2812613+ (Aspergillus niger KJC3)
ATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCTCCAGACAGAC
TGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCTCAGCCTCAGG
CTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCC
TTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTTTCCCGCAATA
TGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTATGACCAGCAGC
AGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACCTGGTGGCTTT
AACAACAACCAGATCTACAACCAGCAATACGGTGGTTACCAGCAGCAGCA
ACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGC
CCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTC
CTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGT
TCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTT
CGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGCTGCCGCTGTT
GAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGAAGACTGAGAA
GAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCT
CGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCC
AAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAACAAGCCGATGT
CGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAGGAGCACGTCA
ACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTACTTTGGGTGGA
TCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTTTGGAGAAGTA
CAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGG
CCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTT
GGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACGGCAGCACCAT
CACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAGTCTTATGTTC
ACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATC
TCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGGGTGGTCAGAC
TCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAGACCCTTATCG
TCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAGCAAGGCTCGT
TTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTA
CAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAGAGGACCACGG
GTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTATGGCGGTCCC
TCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAA
CGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGACATGGGTACCA
TGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGC
ATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTCTCTATGGTGA
GACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAGGTCCGTCTTC
GTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATTCGTGCTCTGC
TCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGGCCAAGATCAG
GATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAACTGCGTGATGC
ACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACTTCTGCACAAG
TGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAG
CAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTG
CCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGGTCGGTTTACT
CTGCGTGATCAGGGTCAAACCGTTGCCATTGGTATGATTACCAAGCTCAT
CTCTGCCGAAGAGGTGGCGCAGGCGCAGGCGTAAATGGCCGACCAGACCC
CCGATTCCTGGGAGGATGAGCTCTCCAGACAGACTGAGGGCGTCCGTCTG
AACCCCAACGCACAAGGCCGCCCTCAGCCTCAGGCTCCTTCTTTCCACCC
TGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCCTTCGTCCCTGGACAGG
CCTACCAGCCCTACGGCGGCGGTTTCCCGCAATATGGCCAGTACGGCCAG
CAGGCTTACGGTGGATACCCTTATGACCAGCAGCAGCAGGCCTATGCCCA
ATACGGCGCCTACGCTCAGCAACCTGGTGGCTTTAACAACAACCAGATCT
ACAACCAGCAATACGGTGGTTACCAGCAGCAGCAACAGCAGCCCCGTCAA
GCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGCCCGCCCCGAAGCCTGC
CGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTCCTGTCTATTGGCGGCG
CCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGTTCTTTCCATCGGCACC
CCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTTCGACCTCCGGTGCCGC
TACGCCTGGAGATACCAAGGGTGCTGCCGCTGTTGAGGCGGCCGCTAAGG
TGACGGCTTCCAAGGCCATCGAGAAGACTGAGAAGAAGGCCGACGCGAAG
GCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCTCGGGTCGCTCCAGCCC
CGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCCAAGGCTGCTCGTAACG
CCGACGCCGTCGCCATGGAGCAACAAGCCGATGTCGATGAGGCTACTTTG
AAGGAAATCTACGGTGAGAAGAAGGAGCACGTCAACATTGTCTTCATCGG
TCACGTCGATGCCGGAAAGTCTACTTTGGGTGGATCCATCCTTTACGTGA
CCGGCATGGTGGACGAGCGTACTTTGGAGAAGTACAAGAGAGATGCCAAG
GAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGGCCTTGGATTTGACCAA
CGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTTGGTCGTGCTCACTTCC
AGCTCCCCGTCAAGGGAGCCGACGGCAGCACCATCACGAGACATTTCTCC
ATCCTGGATGCTCCTGGTCACAAGTCTTATGTTCACCACATGATCGGTGG
TGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATCTCCGCGCGTAAGGGTG
AATACGAAACCGGTTTCGAGAAGGGTGGTCAGACTCGTGAGCACGCCCTG
CTTGCAAGAAACACCGGTGTGAAGACCCTTATCGTCGCTGTCAACAAGAT
GGACGACCCTACCGTTGAGTGGAGCAAGGCTCGTTTCGACGAGTGTACCG
TCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTACAAGAAGAGCGATCTC
TTCTTCATGCCCATCTCTGCCCAGAGGACCACGGGTATCAAGGACCGCGT
CCCCACGGACCTTGCTCCCTGGTATGGCGGTCCCTCCCTTTTGGAGTTCC
TGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAACGCACCTTTCATGATG
CCCATCAGTGCCAAGTACCGTGACATGGGTACCATGGTCGAGGGTCGCAT
TGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGCATCATGATGCCCAACC
GCACCAAGGTCGAAATTGCCGCTCTCTATGGTGAGACTGAAGACGAAATC
CCCACCGCTACCTGCGGTGACCAGGTCCGTCTTCGTCTCCGTGGTGTGGA
AGAAGAAGATATCTTGCCCGGATTCGTGCTCTGCTCCCCCAAGCGTCTGG
TGAACTGTGTCAAGACTTTCGAGGCCAAGATCAGGATTCTTGACCTGAAG
AGCATTCTCACGGCTGGTTACAACTGCGTGATGCACGTGCACTCTGCTGT
CGAAGAAGTTACTGTTGCAGCACTTCTGCACAAGTGCGAGCCCGGCACTG
GACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAGCAAGGGTCAGACCATC
ATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTGCCGTTTGTGTCGAGCG
CTTTGAGGACTACAACCAGATGGGTCGGTTTACTCTGCGTGATCAGGGTC
AAACCGTTGCCATTGGTATGATTACCAAGCTCATCTCTGCCGAAGAGGTG
GCGCAGGCGCAGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006415translational termination
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUP35KJC3_002525Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002525-T1.utr5p1KJC3_002525-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002525-T1.exon1KJC3_002525-T1.exon1Aspergillus niger KJC3exon
KJC3_002525-T1.exon2KJC3_002525-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002525-T1.cdsKJC3_002525-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002525-T1.utr3p1KJC3_002525-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002525-T1KJC3_002525-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261PUF
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR003285
DBxrefInterPro:IPR000795
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation termination factor GTPase eRF3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2808676..2812613 +
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