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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2847457..2848465+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002537-T1 ID=KJC3_002537-T1|Name=KJC3_002537-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1009bp|location=Sequence derived from alignment at ch2:2847457..2848465+ (Aspergillus niger KJC3)
TTTTCCATTCTTGTTGAATCTTCGGTGAGTCTCCGCTCTATCGCATTTCT
TCTCCCTTGCGATCTTGTGTTTTTCTACATTCCGAGGTCCAGCACTCCGT
ACAGGCTGGACTGGGGGTGGCTTATGCTTCTGGAATTGTTACTCGTATTG
CCTATCTACTCAATACCCTATCGCATGAAGTCAAGATTCATGGCATCCCG
ATCATGAAACTGTCCTGGAACTCTACCCAAATTACCCTGCTTATCACCTA
GTTCTTACTCTCACCGATCAATCTGCTTGGCTTTGTCAGTCGCTGACTTT
TACATTCTCTATTTCCACAGCCACACTTACTACCATAACCATGGCCGACG
CAAAGGAATTCACCTTCCAGGAGGTCAGCGCTCACAACACCAAGAAGGAC
CTTTACATGGTCATTCACGACAAGGTCTACGACTGCACCTCCTTCGTTGA
CGAGCACCCGTACGTTCACCACCATTCACTTCCCACATGCACATCCCTTC
CCAATTGAGCTTTCACCCCCTCGCCTCCAGACGTTCTGCTTGCTCCCCCC
CCTCCAAAAAAGCAATGAGATAAATCGCGCAAGGAAATACTCCGCCGGAC
CGAAGAAACAAAACAAACTAACACAATTTGCTCTCAAAAACAGTGGTGGT
GAGGAAGTCCTCCTCGACGTCGGTGGCCAGGACGGCACCGAGGCTTTCGA
AGATGTCGGACACAGTGACGAGGCCCGTGAGATCCTGGACGGTCTCCTGG
TCGGCAAGCTGAAGCGCATGGTACGTCGTCAGATAACAAAAAGCAAATCG
CATGACAATAGTTTCTCACACTAACGAAAACCCATCAGCCCGGTGATCCT
GCCCCTCGCTCTCAACCCCAGTCTTCCTCCGGTCCCTCGGGCTCCGGCGA
CAGCGCCGGCCTGGGTGTCGGTCTCTACGGCATCGTCCTGGTTGGTGGCC
TGATCGCCTACTTCGCCTACCAATACCTCCAGAATGCTTCCGCCGCTGAG
ACGCAGTAA back to topCoding sequence (CDS) from alignment at ch2:2847457..2848465+ >KJC3_002537-T1 ID=KJC3_002537-T1|Name=KJC3_002537-T1|organism=Aspergillus niger KJC3|type=CDS|length=1251bp|location=Sequence derived from alignment at ch2:2847457..2848465+ (Aspergillus niger KJC3)
ATGGCCGACGCAAAGGAATTCACCTTCCAGGAGGTCAGCGCTCACAACAC
CAAGAAGGACCTTTACATGGTCATTCACGACAAGGTCTACGACTGCACCT
CCTTCGTTGACGAGCACCCTGGTGGTGAGGAAGTCCTCCTCGACGTCGGT
GGCCAGGACGGCACCGAGGCTTTCGAAGATGTCGGACACAGTGACGAGGC
CCGTGAGATCCTGGACGGTCTCCTGGTCGGCAAGCTGAAGCGCATGCCCG
GTGATCCTGCCCCTCGCTCTCAACCCCAGTCTTCCTCCGGTCCCTCGGGC
TCCGGCGACAGCGCCGGCCTGGGTGTCGGTCTCTACGGCATCGTCCTGGT
TGGTGGCCTGATCGCCTACTTCGCCTACCAATACCTCCAGAATGCTTCCG
CCGCTGAGACGCAGTAAATGGCCGACGCAAAGGAATTCACCTTCCAGGAG
GTCAGCGCTCACAACACCAAGAAGGACCTTTACATGGTCATTCACGACAA
GGTCTACGACTGCACCTCCTTCGTTGACGAGCACCCTGGTGGTGAGGAAG
TCCTCCTCGACGTCGGTGGCCAGGACGGCACCGAGGCTTTCGAAGATGTC
GGACACAGTGACGAGGCCCGTGAGATCCTGGACGGTCTCCTGGTCGGCAA
GCTGAAGCGCATGCCCGGTGATCCTGCCCCTCGCTCTCAACCCCAGTCTT
CCTCCGGTCCCTCGGGCTCCGGCGACAGCGCCGGCCTGGGTGTCGGTCTC
TACGGCATCGTCCTGGTTGGTGGCCTGATCGCCTACTTCGCCTACCAATA
CCTCCAGAATGCTTCCGCCGCTGAGACGCAGTAAATGGCCGACGCAAAGG
AATTCACCTTCCAGGAGGTCAGCGCTCACAACACCAAGAAGGACCTTTAC
ATGGTCATTCACGACAAGGTCTACGACTGCACCTCCTTCGTTGACGAGCA
CCCTGGTGGTGAGGAAGTCCTCCTCGACGTCGGTGGCCAGGACGGCACCG
AGGCTTTCGAAGATGTCGGACACAGTGACGAGGCCCGTGAGATCCTGGAC
GGTCTCCTGGTCGGCAAGCTGAAGCGCATGCCCGGTGATCCTGCCCCTCG
CTCTCAACCCCAGTCTTCCTCCGGTCCCTCGGGCTCCGGCGACAGCGCCG
GCCTGGGTGTCGGTCTCTACGGCATCGTCCTGGTTGGTGGCCTGATCGCC
TACTTCGCCTACCAATACCTCCAGAATGCTTCCGCCGCTGAGACGCAGTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0020037 | heme binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002537-T1.utr5p1 | KJC3_002537-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018506 |
| DBxref | InterPro:IPR036400 |
| DBxref | InterPro:IPR001199 |
| DBxref | PFAM:PF00173 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2847457..2848465 + |
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