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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2884392..2885301+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002546-T1 ID=KJC3_002546-T1|Name=KJC3_002546-T1|organism=Aspergillus niger KJC3|type=mRNA|length=910bp|location=Sequence derived from alignment at ch2:2884392..2885301+ (Aspergillus niger KJC3)
ATGAAAATCCTCTGCCTACATGGCTACGGCACGGGGCCTAATATTCTGCG
ATATCAACTTTCGGGGTTGATGCGAGATGCTGACCCAAGCTGGGAGTTTC
ATTTTCTCTCAGCTGAAGTTGAATGTCCGCCTGCTCCAGGTATGTTTGTC
AGTCATTTATCGCAAATCAGTTGTTGCTAAACATCAGCTTCATCAACCGA
ATATAGATATTGGGAGCACTTTCCCACCTCCATACTACTGCTGGACGCGG
TCGTTTGACGCAGGGTCAATCGATGCTGCCCATGCCTTGATCGAAGAGGC
TATTGATGAGCATGGCCCTTTTGACGGAGTTTTGGGGTTCAGTCAAGGAG
CTGCAATCTCGGTTTCGTTCCTGCTCGAGCACAAAACGGCATACCCAGAC
GAGCCCCCACCATTTCGTTTCGCAATCTTCTATTCGCCCACGATTCCGTG
CGCCGCGGATGAAGCTTATTGTCGGTCTGTACTCGGAACTCTCTCGTCAG
CGGACCAGCAAAGCCTCCGCTCCGGAAAGGATAAAGAGATTGCACAGCTT
CCGGAACCTGTTCGCTCTGTGACCGAGAGTTTGGTTAAAGTCATCAAGGG
AACCCACTCTATAACACGCGAGTCGGTGCCTTTCTTCCTCGACCGCCCGC
TTGAGCTTATCCCATGTGCCCTGCACCCAAATGTAGTACCGACTCGTATA
TCAATTCCTTCTCTCCACCTGCGTGGAAAGAACGATGTGCCAGGTCTGGA
CGATTGTGGCCTCCTCGTCGAGTGTCTTTGTGATTCGAATACTCGGAGGC
CAATCATACATTCGGCTGGTCATGACATTCCACGATCAGGGCCAGAGCTA
AAGCAAATGCTGTCTGCCGTGGAATGGGTTGTGGCGAAGAGCCAGTTACC
ATTACTCTAA back to topCoding sequence (CDS) from alignment at ch2:2884392..2885301+ >KJC3_002546-T1 ID=KJC3_002546-T1|Name=KJC3_002546-T1|organism=Aspergillus niger KJC3|type=CDS|length=1686bp|location=Sequence derived from alignment at ch2:2884392..2885301+ (Aspergillus niger KJC3)
ATGAAAATCCTCTGCCTACATGGCTACGGCACGGGGCCTAATATTCTGCG
ATATCAACTTTCGGGGTTGATGCGAGATGCTGACCCAAGCTGGGAGTTTC
ATTTTCTCTCAGCTGAAGTTGAATGTCCGCCTGCTCCAGATATTGGGAGC
ACTTTCCCACCTCCATACTACTGCTGGACGCGGTCGTTTGACGCAGGGTC
AATCGATGCTGCCCATGCCTTGATCGAAGAGGCTATTGATGAGCATGGCC
CTTTTGACGGAGTTTTGGGGTTCAGTCAAGGAGCTGCAATCTCGGTTTCG
TTCCTGCTCGAGCACAAAACGGCATACCCAGACGAGCCCCCACCATTTCG
TTTCGCAATCTTCTATTCGCCCACGATTCCGTGCGCCGCGGATGAAGCTT
ATTGTCGGTCTGTACTCGGAACTCTCTCGTCAGCGGACCAGCAAAGCCTC
CGCTCCGGAAAGGATAAAGAGATTGCACAGCTTCCGGAACCTGTTCGCTC
TGTGACCGAGAGTTTGGTTAAAGTCATCAAGGGAACCCACTCTATAACAC
GCGAGTCGGTGCCTTTCTTCCTCGACCGCCCGCTTGAGCTTATCCCATGT
GCCCTGCACCCAAATGTAGTACCGACTCGTATATCAATTCCTTCTCTCCA
CCTGCGTGGAAAGAACGATGTGCCAGGTCTGGACGATTGTGGCCTCCTCG
TCGAGTGTCTTTGTGATTCGAATACTCGGAGGCCAATCATACATTCGGCT
GGTCATGACATTCCACGATCAGGGCCAGAGCTAAAGCAAATGCTGTCTGC
CGTGGAATGGGTTGTGGCGAAGAGCCAGTTACCATTACTCTAAATGAAAA
TCCTCTGCCTACATGGCTACGGCACGGGGCCTAATATTCTGCGATATCAA
CTTTCGGGGTTGATGCGAGATGCTGACCCAAGCTGGGAGTTTCATTTTCT
CTCAGCTGAAGTTGAATGTCCGCCTGCTCCAGATATTGGGAGCACTTTCC
CACCTCCATACTACTGCTGGACGCGGTCGTTTGACGCAGGGTCAATCGAT
GCTGCCCATGCCTTGATCGAAGAGGCTATTGATGAGCATGGCCCTTTTGA
CGGAGTTTTGGGGTTCAGTCAAGGAGCTGCAATCTCGGTTTCGTTCCTGC
TCGAGCACAAAACGGCATACCCAGACGAGCCCCCACCATTTCGTTTCGCA
ATCTTCTATTCGCCCACGATTCCGTGCGCCGCGGATGAAGCTTATTGTCG
GTCTGTACTCGGAACTCTCTCGTCAGCGGACCAGCAAAGCCTCCGCTCCG
GAAAGGATAAAGAGATTGCACAGCTTCCGGAACCTGTTCGCTCTGTGACC
GAGAGTTTGGTTAAAGTCATCAAGGGAACCCACTCTATAACACGCGAGTC
GGTGCCTTTCTTCCTCGACCGCCCGCTTGAGCTTATCCCATGTGCCCTGC
ACCCAAATGTAGTACCGACTCGTATATCAATTCCTTCTCTCCACCTGCGT
GGAAAGAACGATGTGCCAGGTCTGGACGATTGTGGCCTCCTCGTCGAGTG
TCTTTGTGATTCGAATACTCGGAGGCCAATCATACATTCGGCTGGTCATG
ACATTCCACGATCAGGGCCAGAGCTAAAGCAAATGCTGTCTGCCGTGGAA
TGGGTTGTGGCGAAGAGCCAGTTACCATTACTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.13 |
| Note | antiSMASH:Cluster_2.12 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR005645 |
| DBxref | PFAM:PF03959 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2884392..2885301 + |
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