KJC3_002554-T1, KJC3_002554-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_002554-T1
Unique Name	KJC3_002554-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:2909633..2911252+
coding sequence from alignment at ch2:2909633..2911252+

mRNA from alignment at ch2:2909633..2911252+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_002554-T1 ID=KJC3_002554-T1|Name=KJC3_002554-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch2:2909633..2911252+ (Aspergillus niger KJC3)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTAAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGACCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTCGATCCTCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTCGAGTACTATCCAAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACAAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATATCGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA
AGTCCACTGTAGCTCATACTGACATTGCTTAGGGGCTATGCTATGCATCT
CGGTCTCGAACCATCATATACCAGCCCTATTCGCCTACCCGATGAGGTCG
ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC
TTTGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGCACAAATTCCAGAGA
TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT
CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCAGAT
TATTGCATCACTAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT
GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA
GATTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGTCGCTACAAGGCTTT
ACTGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA
TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT
GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG
GTTTCAACGTACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC
CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT
CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC
TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATCAAGATAA
TGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT
CGCGATGGGCTCTCTATTAA

Coding sequence (CDS) from alignment at ch2:2909633..2911252+

>KJC3_002554-T1 ID=KJC3_002554-T1|Name=KJC3_002554-T1|organism=Aspergillus niger KJC3|type=CDS|length=4545bp|location=Sequence derived from alignment at ch2:2909633..2911252+ (Aspergillus niger KJC3)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTAAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGACCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTCGATCCTCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTCGAGTACTATCCAAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACAAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATATCGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGGGCTATGCTATGCATCTC
GGTCTCGAACCATCATATACCAGCCCTATTCGCCTACCCGATGAGGTCGA
TGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCT
TTGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGCACAAATTCCAGAGAT
AAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATC
GATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCAGATT
ATTGCATCACTAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTG
TCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAG
ATTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGTCGCTACAAGGCTTTA
CTGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGCTGTTGAAGTGTTTC
GAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTTTC
AACGTACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTAT
ACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATA
CTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACT
GGACTTGAACTATGACCCTTGGTCATTCGATGACGATCAAGATAATGCTT
ACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGA
TGGGCTCTCTATTAAATGCGCCATCGACTCACAAAGCGTGCATGCGATGA
GTGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCT
GCCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTAAAACCTGCGCGG
AGAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGACCGGAACA
CGCGACAACCGGTCCTTTGATCACTCCACATGTCGATCCTCGTGACGAGG
GGATAGCCCGTGTGGAGGTAGAGCAACATGTCTCGAGTACTATCCAAACA
GAAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGCGT
GTGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCA
CGCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACC
ATGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGC
GGCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCT
TGGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACAAGAGGGAC
TCGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAA
GCTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATATCG
TTGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGGGC
TATGCTATGCATCTCGGTCTCGAACCATCATATACCAGCCCTATTCGCCT
ACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTG
AGCTTGGCAGACTCTTTGCCACGTTCGATGGGGTTTCGTCCGGAAGGAGC
ACAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGAC
GGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCA
CCCGCATTGCAGATTATTGCATCACTAAAGAATGGATGAGGACTATCATC
TGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCA
GCTCATGACATTTAGATTCCCGGCAGTGGTTAGCCGTGACCTTTTGATGT
CGCTACAAGGCTTTACTGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAG
CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT
CACGCCATCGGTTTCAACGTACTCTGCCTTCCAGTTAGGGCCACACGACT
TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC
ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC
CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG
ATCAAGATAATGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG
TACGTTGATTCGCGATGGGCTCTCTATTAAATGCGCCATCGACTCACAAA
GCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCT
GGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCACTTAC
CTAAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCGGGGG
TCAGGGACCGGAACACGCGACAACCGGTCCTTTGATCACTCCACATGTCG
ATCCTCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGTCTCG
AGTACTATCCAAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCA
GGCGTCTTATAGCGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACA
AGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCATGGCT
CTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTGTTGA
TAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCACCTTG
ATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGCCAAG
ATCAACAAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGTATGG
CGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGC
TCGGTGCAGATATCGTTGCTAATAAAGAGATTGTATTCCTCTTGCTCTGG
GTTTCTGAAAGGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATAC
CAGCCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATG
CGAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGGTT
TCGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGA
TAGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAG
GCGACCGACCTTCCACCCGCATTGCAGATTATTGCATCACTAAAGAATGG
ATGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTC
GAAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCAGTGGTTAGCC
GTGACCTTTTGATGTCGCTACAAGGCTTTACTGAGTCTGACTTGCTGCCT
TTGGGGCGCGACCAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC
GGATACTGTCCTGCTCACGCCATCGGTTTCAACGTACTCTGCCTTCCAGT
TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC
CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA
GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT
GGTCATTCGATGACGATCAAGATAATGCTTACACTACCGAAGAGCATGTG
GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_002554	KJC3_002554	Aspergillus niger KJC3	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002554-T1.exon1	KJC3_002554-T1.exon1	Aspergillus niger KJC3	exon
KJC3_002554-T1.exon2	KJC3_002554-T1.exon2	Aspergillus niger KJC3	exon
KJC3_002554-T1.exon3	KJC3_002554-T1.exon3	Aspergillus niger KJC3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002554-T1.cds	KJC3_002554-T1.cds	Aspergillus niger KJC3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002554-T1	KJC3_002554-T1-protein	Aspergillus niger KJC3	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:2909633..2911252 +

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KJC3_002554-T1, KJC3_002554-T1 (mRNA) Aspergillus niger KJC3