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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2934682..2936024+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002566-T1 ID=KJC3_002566-T1|Name=KJC3_002566-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1343bp|location=Sequence derived from alignment at ch2:2934682..2936024+ (Aspergillus niger KJC3)
ATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAG
TGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCACTG
GCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTC
TCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTACTCACCAAGACCTT
TGATTTCATCGGTACCGAGGGAACCACGACCGAGGATGGATGCGCGCCCT
GGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGT
GTTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGG
CATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCG
TGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATC
GTGCAGAACATTAAGATTACGAACCTCAACCCTGGGTATGTATCATCCCA
GTAACTAGGAGTTCTCGAATGCTTTGGGAGACACACCATGTGTTCTAACG
TCTTTCACTACAGTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGC
GCTGACCTGATCTGGATCGACCACTGCGAGGTAAGACAGAAATCTCCATC
ATCTGATAATCATGATTGAGTTTCTCACGTTGACTTATGGATTAGACCTC
CCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGCA
TGACTTGGTCCAATAACTTCCTTAACGGCGTAACCACCCACTCCGCAGGC
TGTGATGACCACCACTACTGGACAATGGAGCTAGTTGGCCCTGGGGACGA
GATTACCTTCCAGAGTACGTGTCCCATGAAAACCTAAAAGAAGCATCTAT
TCAACTAACATACGTGTTCACTCACAGACAACTACGTCTACCACACCACC
GGCCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAG
CGTCTGGTCTTCCATCCCCGGACACGCCATCGAGGGCGGTGACAAGGGCC
GCGGTCTTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATCGCCCCC
GCCAAGCCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCAACGCCGCATC
TTGCAAGTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGCTATAGCAAAT
CTGGTGCTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGA
CTGACTATTGCACCGGCCGGCTCTGCGACCGACGCTCTCGCTTATGTTCC
TAAGAATTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCTTAG back to topCoding sequence (CDS) from alignment at ch2:2934682..2936024+ >KJC3_002566-T1 ID=KJC3_002566-T1|Name=KJC3_002566-T1|organism=Aspergillus niger KJC3|type=CDS|length=4548bp|location=Sequence derived from alignment at ch2:2934682..2936024+ (Aspergillus niger KJC3)
ATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAG
TGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCACTG
GCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTC
TCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTACTCACCAAGACCTT
TGATTTCATCGGTACCGAGGGAACCACGACCGAGGATGGATGCGCGCCCT
GGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGT
GTTAAAAATCCCGTCGTAACCATCACGTATGATAACGCCGCCAAGAATGG
CATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCG
TGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATC
GTGCAGAACATTAAGATTACGAACCTCAACCCTGGTTTTGTCTGGGGTGG
CGACGCGTTTACTTTCTTTGGCGCTGACCTGATCTGGATCGACCACTGCG
AGACCTCCCTCACCGGACGCCAACACTACGTGACCGGCTTCCACCCCAAC
ACCCGCATGACTTGGTCCAATAACTTCCTTAACGGCGTAACCACCCACTC
CGCAGGCTGTGATGACCACCACTACTGGACAATGGAGCTAGTTGGCCCTG
GGGACGAGATTACCTTCCAGAACAACTACGTCTACCACACCACCGGCCGT
GGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTCAACAGCGTCTG
GTCTTCCATCCCCGGACACGCCATCGAGGGCGGTGACAAGGGCCGCGGTC
TTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATCGCCCCCGCCAAG
CCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCAACGCCGCATCTTGCAA
GTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGCTATAGCAAATCTGGTG
CTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGACTTTGCCGGACTGACT
ATTGCACCGGCCGGCTCTGCGACCGACGCTCTCGCTTATGTTCCTAAGAA
TTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCTTAGATGAAGGTCCCCT
TCCTCCAACTTCTCTGCCTAAATGCCGCCTTGGCTAGTGCCAATGTTGTT
CAAGGTGCTGCCCAGGGTTTCGCAGCCGGCGTCACTGGCGGCGGCGATAT
AACTCCCAGCTACCCCAAAACCAACGAGGAGCTTGTCTCCCTGCTCGAGA
GTGACGAACCCCAAGTCGTCGTACTCACCAAGACCTTTGATTTCATCGGT
ACCGAGGGAACCACGACCGAGGATGGATGCGCGCCCTGGGGTACTGGGAA
GTCCTGCCAGCTGGCCATCAACTCCAATGGATGGTGTGTTAAAAATCCCG
TCGTAACCATCACGTATGATAACGCCGCCAAGAATGGCATTCATATCAAG
TCCAACAAGACTCTTGTTGGTGAGGGAGACAAGGGCGTGCTCAGCGGAAA
GGGTCTCTACTTTGAGGGTGGTGTTTCCAATATCATCGTGCAGAACATTA
AGATTACGAACCTCAACCCTGGTTTTGTCTGGGGTGGCGACGCGTTTACT
TTCTTTGGCGCTGACCTGATCTGGATCGACCACTGCGAGACCTCCCTCAC
CGGACGCCAACACTACGTGACCGGCTTCCACCCCAACACCCGCATGACTT
GGTCCAATAACTTCCTTAACGGCGTAACCACCCACTCCGCAGGCTGTGAT
GACCACCACTACTGGACAATGGAGCTAGTTGGCCCTGGGGACGAGATTAC
CTTCCAGAACAACTACGTCTACCACACCACCGGCCGTGGACCCGCTCTCT
CCGGCACGACCCTCTTCCACGCAGTCAACAGCGTCTGGTCTTCCATCCCC
GGACACGCCATCGAGGGCGGTGACAAGGGCCGCGGTCTTTTCGAGGGATG
CTTCTTCGAAGATGTTGTCGAGATCGCCCCCGCCAAGCCCGAGAACCAAC
TCTTCAGCGCCAGTGAAGCCAACGCCGCATCTTGCAAGTCCGCCTTGGGA
CGCGCTTGCCAGGCCAATGGCTATAGCAAATCTGGTGCTTTTGGCAGTTC
TGAAACTGGCTTTTTCAAGGACTTTGCCGGACTGACTATTGCACCGGCCG
GCTCTGCGACCGACGCTCTCGCTTATGTTCCTAAGAATTGTGGTATTGGG
CGTCTTGAAAGCTGCGATGCTTAGATGAAGGTCCCCTTCCTCCAACTTCT
CTGCCTAAATGCCGCCTTGGCTAGTGCCAATGTTGTTCAAGGTGCTGCCC
AGGGTTTCGCAGCCGGCGTCACTGGCGGCGGCGATATAACTCCCAGCTAC
CCCAAAACCAACGAGGAGCTTGTCTCCCTGCTCGAGAGTGACGAACCCCA
AGTCGTCGTACTCACCAAGACCTTTGATTTCATCGGTACCGAGGGAACCA
CGACCGAGGATGGATGCGCGCCCTGGGGTACTGGGAAGTCCTGCCAGCTG
GCCATCAACTCCAATGGATGGTGTGTTAAAAATCCCGTCGTAACCATCAC
GTATGATAACGCCGCCAAGAATGGCATTCATATCAAGTCCAACAAGACTC
TTGTTGGTGAGGGAGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACTTT
GAGGGTGGTGTTTCCAATATCATCGTGCAGAACATTAAGATTACGAACCT
CAACCCTGGTTTTGTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTG
ACCTGATCTGGATCGACCACTGCGAGACCTCCCTCACCGGACGCCAACAC
TACGTGACCGGCTTCCACCCCAACACCCGCATGACTTGGTCCAATAACTT
CCTTAACGGCGTAACCACCCACTCCGCAGGCTGTGATGACCACCACTACT
GGACAATGGAGCTAGTTGGCCCTGGGGACGAGATTACCTTCCAGAACAAC
TACGTCTACCACACCACCGGCCGTGGACCCGCTCTCTCCGGCACGACCCT
CTTCCACGCAGTCAACAGCGTCTGGTCTTCCATCCCCGGACACGCCATCG
AGGGCGGTGACAAGGGCCGCGGTCTTTTCGAGGGATGCTTCTTCGAAGAT
GTTGTCGAGATCGCCCCCGCCAAGCCCGAGAACCAACTCTTCAGCGCCAG
TGAAGCCAACGCCGCATCTTGCAAGTCCGCCTTGGGACGCGCTTGCCAGG
CCAATGGCTATAGCAAATCTGGTGCTTTTGGCAGTTCTGAAACTGGCTTT
TTCAAGGACTTTGCCGGACTGACTATTGCACCGGCCGGCTCTGCGACCGA
CGCTCTCGCTTATGTTCCTAAGAATTGTGGTATTGGGCGTCTTGAAAGCT
GCGATGCTTAGATGAAGGTCCCCTTCCTCCAACTTCTCTGCCTAAATGCC
GCCTTGGCTAGTGCCAATGTTGTTCAAGGTGCTGCCCAGGGTTTCGCAGC
CGGCGTCACTGGCGGCGGCGATATAACTCCCAGCTACCCCAAAACCAACG
AGGAGCTTGTCTCCCTGCTCGAGAGTGACGAACCCCAAGTCGTCGTACTC
ACCAAGACCTTTGATTTCATCGGTACCGAGGGAACCACGACCGAGGATGG
ATGCGCGCCCTGGGGTACTGGGAAGTCCTGCCAGCTGGCCATCAACTCCA
ATGGATGGTGTGTTAAAAATCCCGTCGTAACCATCACGTATGATAACGCC
GCCAAGAATGGCATTCATATCAAGTCCAACAAGACTCTTGTTGGTGAGGG
AGACAAGGGCGTGCTCAGCGGAAAGGGTCTCTACTTTGAGGGTGGTGTTT
CCAATATCATCGTGCAGAACATTAAGATTACGAACCTCAACCCTGGTTTT
GTCTGGGGTGGCGACGCGTTTACTTTCTTTGGCGCTGACCTGATCTGGAT
CGACCACTGCGAGACCTCCCTCACCGGACGCCAACACTACGTGACCGGCT
TCCACCCCAACACCCGCATGACTTGGTCCAATAACTTCCTTAACGGCGTA
ACCACCCACTCCGCAGGCTGTGATGACCACCACTACTGGACAATGGAGCT
AGTTGGCCCTGGGGACGAGATTACCTTCCAGAACAACTACGTCTACCACA
CCACCGGCCGTGGACCCGCTCTCTCCGGCACGACCCTCTTCCACGCAGTC
AACAGCGTCTGGTCTTCCATCCCCGGACACGCCATCGAGGGCGGTGACAA
GGGCCGCGGTCTTTTCGAGGGATGCTTCTTCGAAGATGTTGTCGAGATCG
CCCCCGCCAAGCCCGAGAACCAACTCTTCAGCGCCAGTGAAGCCAACGCC
GCATCTTGCAAGTCCGCCTTGGGACGCGCTTGCCAGGCCAATGGCTATAG
CAAATCTGGTGCTTTTGGCAGTTCTGAAACTGGCTTTTTCAAGGACTTTG
CCGGACTGACTATTGCACCGGCCGGCTCTGCGACCGACGCTCTCGCTTAT
GTTCCTAAGAATTGTGGTATTGGGCGTCTTGAAAGCTGCGATGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2934682..2936024 + |
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