You are here

Home

KJC3_002568-T1, KJC3_002568-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002568-T1
Unique NameKJC3_002568-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2939073..2940743-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002568-T1 ID=KJC3_002568-T1|Name=KJC3_002568-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1671bp|location=Sequence derived from alignment at ch2:2939073..2940743- (Aspergillus niger KJC3)
ATGCCTGCCACGGGCTCCCTTGTCCTGCGAGGGCTCGCTGCCTTGGCCCT
GACCGTCGTCTCTGCTCAGGCCCAGCTCTGGAATCAGACCATTCAAACCT
CATATGGCCCTGTGAAGGGTTTCCAGTACTTTGATCAAACTACTCTGGAG
ACTTACTTCAATGTCTCCGAGTCCAATGTTACCGCCTTTCTGGGGATCCC
ATATGCGGCTGATACCAGCTATGGCAACCGTTGGAAACCACCTCAACCTC
GCCAGTCATGGAACAAGACATTTGATGCCGTTGAATTTGGCTATACATGC
CCGACTGCCATGTCTTCAAACTCTAGCGAGGACTGCTTGAATCTGAATAT
CTGGACCAATGCCGGCTCGCCTGACGCTCGCTTACCCGTCATGGTGTGGA
ATCAGGGCTCGGACTTGTCGAGTGATATTCCGTACTGGTATGGTGGCGGA
ATGGCATTAAAAGATGTTATTCTTGTATCATTTAACCGCCGTGATGATGC
CTTTGGTTACCTAGCGCATCCTGAGTTGAATAAGGAGGGCTTCGAAGAGA
CTGGTCATTACACCTCAGGCAACTATGGTATTCTGGACTTTCTTGAAGTG
CTTAAATGGGTGCAGGCCAATATTGCAAACTTTGGAGGCAATCCAGATCG
TGTAGTGATTGCCGGCCAGTCATTTGGGTCATCACAGGTTTATCATGCGG
TCAACAGTCCTTTATTCTCTGGCCTCTTCCATGGAGCTATCTCTGAGTCC
GGTATCCGCTATCCCTACGATCCGATGTTAGCAGGTTTAGCTACATCCTA
CAATAATATGTCGGCTGCCCTAGCCCACGGGTTGAATTATACTAGTTTCC
ATAATGTCTCTAGTATTGCTGAGCTACGAACCCTCTCTACTGCAGACTTG
ATGCAAGGCTCAACCGATAAGGTCAATAATACCTGGATAAACTGGGTTAC
TGCACTCTCCTGCGGATATCCTGATATCTTTAAGCCTGTTCTGGATGACT
ATGTCCTGCCAAGCACGTATCTTCAAACATTGCGCAACGGTCCGGCCAAT
GATGTCCCCTTGATCACTGGTAATACGAAGGATGAATCCGGTGCCTCAAC
CACGACTAACTATACTCTGGGGGAGTACCGGACATACAACACCCTCCGGT
ACGGAAATCTCACCTCAAACTACTTCTCTCTTTATCCGGACCACAACAAT
CAAACCATTGCTAATGAAGCGTGGAATGATGCCGCACGCGATCAAAGCAA
AGTTGGCTCCTGGGCCTACGCTACCCAGTGGTACGGTGCTGCAAAAGCGG
ATTTCTATACCTACTACTGGACCCATGCGCCTCCTGGGCAGACAGAGGGC
GCCTTCCACATGTCTGAAATTATGTATGCCCTCAACGCCCTCTATAGCTG
CGCCGATCTCTATTCCTTCACTGCCGAGGACTACGCCATTGCCGATAAGC
TTTCTGCTTATTGGGCCAACTTTGCTAAGACGCTAGACCCTAATATTGGG
GATTCATACACCGGTTCAGATGGGCCGCTGGCCCACTGGGAGCCTAACTC
ACCTAAGGGAAAGCCGGCGGTGGTAATGGAACTGGGTGATGCTTTCCGGG
AAATTGAGGTTGCGGGTCCAGAGAAGGTAGAATTTGTGATGGAGTACTTT
GCCCAGCAGACCCCTTATTAG
back to top

Coding sequence (CDS) from alignment at ch2:2939073..2940743-

>KJC3_002568-T1 ID=KJC3_002568-T1|Name=KJC3_002568-T1|organism=Aspergillus niger KJC3|type=CDS|length=1671bp|location=Sequence derived from alignment at ch2:2939073..2940743- (Aspergillus niger KJC3)
ATGCCTGCCACGGGCTCCCTTGTCCTGCGAGGGCTCGCTGCCTTGGCCCT
GACCGTCGTCTCTGCTCAGGCCCAGCTCTGGAATCAGACCATTCAAACCT
CATATGGCCCTGTGAAGGGTTTCCAGTACTTTGATCAAACTACTCTGGAG
ACTTACTTCAATGTCTCCGAGTCCAATGTTACCGCCTTTCTGGGGATCCC
ATATGCGGCTGATACCAGCTATGGCAACCGTTGGAAACCACCTCAACCTC
GCCAGTCATGGAACAAGACATTTGATGCCGTTGAATTTGGCTATACATGC
CCGACTGCCATGTCTTCAAACTCTAGCGAGGACTGCTTGAATCTGAATAT
CTGGACCAATGCCGGCTCGCCTGACGCTCGCTTACCCGTCATGGTGTGGA
ATCAGGGCTCGGACTTGTCGAGTGATATTCCGTACTGGTATGGTGGCGGA
ATGGCATTAAAAGATGTTATTCTTGTATCATTTAACCGCCGTGATGATGC
CTTTGGTTACCTAGCGCATCCTGAGTTGAATAAGGAGGGCTTCGAAGAGA
CTGGTCATTACACCTCAGGCAACTATGGTATTCTGGACTTTCTTGAAGTG
CTTAAATGGGTGCAGGCCAATATTGCAAACTTTGGAGGCAATCCAGATCG
TGTAGTGATTGCCGGCCAGTCATTTGGGTCATCACAGGTTTATCATGCGG
TCAACAGTCCTTTATTCTCTGGCCTCTTCCATGGAGCTATCTCTGAGTCC
GGTATCCGCTATCCCTACGATCCGATGTTAGCAGGTTTAGCTACATCCTA
CAATAATATGTCGGCTGCCCTAGCCCACGGGTTGAATTATACTAGTTTCC
ATAATGTCTCTAGTATTGCTGAGCTACGAACCCTCTCTACTGCAGACTTG
ATGCAAGGCTCAACCGATAAGGTCAATAATACCTGGATAAACTGGGTTAC
TGCACTCTCCTGCGGATATCCTGATATCTTTAAGCCTGTTCTGGATGACT
ATGTCCTGCCAAGCACGTATCTTCAAACATTGCGCAACGGTCCGGCCAAT
GATGTCCCCTTGATCACTGGTAATACGAAGGATGAATCCGGTGCCTCAAC
CACGACTAACTATACTCTGGGGGAGTACCGGACATACAACACCCTCCGGT
ACGGAAATCTCACCTCAAACTACTTCTCTCTTTATCCGGACCACAACAAT
CAAACCATTGCTAATGAAGCGTGGAATGATGCCGCACGCGATCAAAGCAA
AGTTGGCTCCTGGGCCTACGCTACCCAGTGGTACGGTGCTGCAAAAGCGG
ATTTCTATACCTACTACTGGACCCATGCGCCTCCTGGGCAGACAGAGGGC
GCCTTCCACATGTCTGAAATTATGTATGCCCTCAACGCCCTCTATAGCTG
CGCCGATCTCTATTCCTTCACTGCCGAGGACTACGCCATTGCCGATAAGC
TTTCTGCTTATTGGGCCAACTTTGCTAAGACGCTAGACCCTAATATTGGG
GATTCATACACCGGTTCAGATGGGCCGCTGGCCCACTGGGAGCCTAACTC
ACCTAAGGGAAAGCCGGCGGTGGTAATGGAACTGGGTGATGCTTTCCGGG
AAATTGAGGTTGCGGGTCCAGAGAAGGTAGAATTTGTGATGGAGTACTTT
GCCCAGCAGACCCCTTATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002568KJC3_002568Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002568-T1.cdsKJC3_002568-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002568-T1.exon1KJC3_002568-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002568-T1KJC3_002568-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-24)
NoteMEROPS:MER0033226
DBxrefInterPro:IPR002018
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2939073..2940743 -
Powered by Drupal