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KJC3_002592-T1, KJC3_002592-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002592-T1
Unique NameKJC3_002592-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3016497..3017426-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002592-T1 ID=KJC3_002592-T1|Name=KJC3_002592-T1|organism=Aspergillus niger KJC3|type=mRNA|length=930bp|location=Sequence derived from alignment at ch2:3016497..3017426- (Aspergillus niger KJC3)
GGCCCTTGTACCCGACGACCAGTGACTGTTCAACGGCCATTTCAGAAGTA
CATCTGAGTGCAGAAACCAAGCACAACAAAATATACATATCATCAAAGTT
TACGTGAACTCGACTTCATCATGTCTTTCCTTCGTCTATCTACAAGGGCT
TTACCCGGCAATCTGCTCCCTCGCCAACACGTCGCCCGCCGCACCATTGC
AACAGCAAGCAAGAAGGAATGGCTATGCATTATTCCTGATACACCTGAGG
GTCCCGAACTGAGGAAAAAGGTTCGAGCGTGAGTTGTCACTATATCTCAT
CTGGGTGTAATTTAGCTCAACTCTCCTCACTAACAATAACGTAGGACTCA
CATGGAAGGAGTCGGCCCTCTCGTCCAAGCGGGAAAGCTGGTCGCCGGTG
GTTCGTCTCATATCATACCGTCTAATTATACTTGATCCCTTCATCATGCA
TTACAGTTGATTAATTATACCTGCACAGGTGCGATGCTGGCCACTCATCC
CGAGGAAGGCAAAGATCTGGCATTCAAGGGCAGTATGCTTGTGTATATGG
CTGAAAATTTGGACGAAGTGCACCAGCTTATCAACGGCGATATCTATGCT
AAGAGTGGCGTTTGGGATCTGGGGAAGGCTCTTGTTGTTCCGGTGAGTGG
TTCGCTTTTGTTCTTTCTGTTGTGGTGCTATGAGTTCGGTTGTGCTGATG
GTGGCTGTGTACAGTATTTGTCGGCTGTGAGGGAGCCTTTGAAGAAGGAT
TAGTGAGGACTATCTATTTCAACTAGTGTCTCGGAGAGTACCGGTGCTGT
TTTTCTCCCAATATATTAGAGAATGGCCATCGTTGAGCGTATATGGTTTC
TTGCAGCACTTGGAGCTGATTAAGCATTTTACCTATGAATTATGCAACGG
GCATCTGGATCTCCTCGGACCATTTCTTAT
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Coding sequence (CDS) from alignment at ch2:3016497..3017426-

>KJC3_002592-T1 ID=KJC3_002592-T1|Name=KJC3_002592-T1|organism=Aspergillus niger KJC3|type=CDS|length=1668bp|location=Sequence derived from alignment at ch2:3016497..3017426- (Aspergillus niger KJC3)
TATTTGTCGGCTGTGAGGGAGCCTTTGAAGAAGGATTAGGTGCGATGCTG
GCCACTCATCCCGAGGAAGGCAAAGATCTGGCATTCAAGGGCAGTATGCT
TGTGTATATGGCTGAAAATTTGGACGAAGTGCACCAGCTTATCAACGGCG
ATATCTATGCTAAGAGTGGCGTTTGGGATCTGGGGAAGGCTCTTGTTGTT
CCGGACTCACATGGAAGGAGTCGGCCCTCTCGTCCAAGCGGGAAAGCTGG
TCGCCGGTGATGTCTTTCCTTCGTCTATCTACAAGGGCTTTACCCGGCAA
TCTGCTCCCTCGCCAACACGTCGCCCGCCGCACCATTGCAACAGCAAGCA
AGAAGGAATGGCTATGCATTATTCCTGATACACCTGAGGGTCCCGAACTG
AGGAAAAAGGTTCGAGCTATTTGTCGGCTGTGAGGGAGCCTTTGAAGAAG
GATTAGGTGCGATGCTGGCCACTCATCCCGAGGAAGGCAAAGATCTGGCA
TTCAAGGGCAGTATGCTTGTGTATATGGCTGAAAATTTGGACGAAGTGCA
CCAGCTTATCAACGGCGATATCTATGCTAAGAGTGGCGTTTGGGATCTGG
GGAAGGCTCTTGTTGTTCCGGACTCACATGGAAGGAGTCGGCCCTCTCGT
CCAAGCGGGAAAGCTGGTCGCCGGTGATGTCTTTCCTTCGTCTATCTACA
AGGGCTTTACCCGGCAATCTGCTCCCTCGCCAACACGTCGCCCGCCGCAC
CATTGCAACAGCAAGCAAGAAGGAATGGCTATGCATTATTCCTGATACAC
CTGAGGGTCCCGAACTGAGGAAAAAGGTTCGAGCTATTTGTCGGCTGTGA
GGGAGCCTTTGAAGAAGGATTAGGTGCGATGCTGGCCACTCATCCCGAGG
AAGGCAAAGATCTGGCATTCAAGGGCAGTATGCTTGTGTATATGGCTGAA
AATTTGGACGAAGTGCACCAGCTTATCAACGGCGATATCTATGCTAAGAG
TGGCGTTTGGGATCTGGGGAAGGCTCTTGTTGTTCCGGACTCACATGGAA
GGAGTCGGCCCTCTCGTCCAAGCGGGAAAGCTGGTCGCCGGTGATGTCTT
TCCTTCGTCTATCTACAAGGGCTTTACCCGGCAATCTGCTCCCTCGCCAA
CACGTCGCCCGCCGCACCATTGCAACAGCAAGCAAGAAGGAATGGCTATG
CATTATTCCTGATACACCTGAGGGTCCCGAACTGAGGAAAAAGGTTCGAG
CTATTTGTCGGCTGTGAGGGAGCCTTTGAAGAAGGATTAGGTGCGATGCT
GGCCACTCATCCCGAGGAAGGCAAAGATCTGGCATTCAAGGGCAGTATGC
TTGTGTATATGGCTGAAAATTTGGACGAAGTGCACCAGCTTATCAACGGC
GATATCTATGCTAAGAGTGGCGTTTGGGATCTGGGGAAGGCTCTTGTTGT
TCCGGACTCACATGGAAGGAGTCGGCCCTCTCGTCCAAGCGGGAAAGCTG
GTCGCCGGTGATGTCTTTCCTTCGTCTATCTACAAGGGCTTTACCCGGCA
ATCTGCTCCCTCGCCAACACGTCGCCCGCCGCACCATTGCAACAGCAAGC
AAGAAGGAATGGCTATGCATTATTCCTGATACACCTGAGGGTCCCGAACT
GAGGAAAAAGGTTCGAGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002592KJC3_002592Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002592-T1KJC3_002592-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002592-T1.cdsKJC3_002592-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002592-T1.utr3p1KJC3_002592-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002592-T1.exon4KJC3_002592-T1.exon4Aspergillus niger KJC3exon
KJC3_002592-T1.exon3KJC3_002592-T1.exon3Aspergillus niger KJC3exon
KJC3_002592-T1.exon2KJC3_002592-T1.exon2Aspergillus niger KJC3exon
KJC3_002592-T1.exon1KJC3_002592-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002592-T1.utr5p1KJC3_002592-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR005545
DBxrefPFAM:PF03795
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3016497..3017426 -
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