|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3018956..3019879- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002594-T1 ID=KJC3_002594-T1|Name=KJC3_002594-T1|organism=Aspergillus niger KJC3|type=mRNA|length=924bp|location=Sequence derived from alignment at ch2:3018956..3019879- (Aspergillus niger KJC3)
ACCCCAACCCGTGGTTTCCGGGTATCCCCCGTGTTTTGCAACTTCGCATG
CGCGGCCTCTGAGACATATAAAAGATCATGGACAAATTCTCTGACGGGGT
AACCTGTTGACGAAAGAACAAAGATAAGCTATTTCAGCCGTGCTTACATC
TCGATCTTATTATTCGCAATAATGGAAGAGCCAACCTATGATTCAAGGTA
CGTATGACACACGCCTCCCATCACTTCAACTTGTCTGATTTGAACAGTCG
TCCCATGCCAGCCCTGGAAGTTGTCTACGCACACAGGCTCATCAACTGCC
CGGGCAAAACCATCGTTGGCCTGCGTGTGGAATTTCCCCCGAACGGATCG
ACTCCGCCCCATCGACACGGCGGTGCCTCGGTCTCGGCCTATGTCGTGAG
CGGGACTCTCCTGAACAAGATGAACGAGGACCCGATGAAGGTCATTCCTG
CAGGAGGCTCATGGTATGAAGCCCCGGGTTGCCATCACCGCATCAGTGAC
AATGCCAGTCCGACGGAACCGGCAACCCTGATGGCTGTTATGGTCTTGGA
CTCGGAGGTATATGAACGTGATGGGATGGCGGCATTGATTCAGATCGATG
AGGAGTACAGGCACACTTAGAGGAGTAATTCTGATGTACCCAGCCTGAAG
CTAAGCTGCAGCTGACGTCACTGCTGATTATATTGGAGTTGAGCTCTTGC
AAGGCTACTGAGGTCAATAGCTGTGACGTTGAGCCTGGATGGGTCATGCT
GGTTAAAAGATGATTAAGTACCGGCGGAGACAACGAGCAATGAGGGATAG
GGCGGTTCCACGTCTGAACATCTTCAAATTTAGTACTTGCAGTCCAGTAG
GTATTAATTGAAGGGAGAAAAGCTTTTTCTGAATCACTCCCTTTCATGAT
CAGTCTCTACTCGCCGTACAATAC back to topCoding sequence (CDS) from alignment at ch2:3018956..3019879- >KJC3_002594-T1 ID=KJC3_002594-T1|Name=KJC3_002594-T1|organism=Aspergillus niger KJC3|type=CDS|length=798bp|location=Sequence derived from alignment at ch2:3018956..3019879- (Aspergillus niger KJC3)
TCGTCCCATGCCAGCCCTGGAAGTTGTCTACGCACACAGGCTCATCAACT
GCCCGGGCAAAACCATCGTTGGCCTGCGTGTGGAATTTCCCCCGAACGGA
TCGACTCCGCCCCATCGACACGGCGGTGCCTCGGTCTCGGCCTATGTCGT
GAGCGGGACTCTCCTGAACAAGATGAACGAGGACCCGATGAAGGTCATTC
CTGCAGGAGGCTCATGGTATGAAGCCCCGGGTTGCCATCACCGCATCAGT
GACAATGCCAGTCCGACGGAACCGGCAACCCTGATGGCTGTTATGGTCTT
GGACTCGGAGGTATATGAACGTGATGGGATGGCGGCATTGATTCAGATCG
ATGAGGAGTACAGGCACACTTAGATGGAAGAGCCAACCTATGATTCAAGT
CGTCCCATGCCAGCCCTGGAAGTTGTCTACGCACACAGGCTCATCAACTG
CCCGGGCAAAACCATCGTTGGCCTGCGTGTGGAATTTCCCCCGAACGGAT
CGACTCCGCCCCATCGACACGGCGGTGCCTCGGTCTCGGCCTATGTCGTG
AGCGGGACTCTCCTGAACAAGATGAACGAGGACCCGATGAAGGTCATTCC
TGCAGGAGGCTCATGGTATGAAGCCCCGGGTTGCCATCACCGCATCAGTG
ACAATGCCAGTCCGACGGAACCGGCAACCCTGATGGCTGTTATGGTCTTG
GACTCGGAGGTATATGAACGTGATGGGATGGCGGCATTGATTCAGATCGA
TGAGGAGTACAGGCACACTTAGATGGAAGAGCCAACCTATGATTCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002594-T1.utr3p1 | KJC3_002594-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002594-T1.utr5p1 | KJC3_002594-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR013096 |
| DBxref | InterPro:IPR014710 |
| DBxref | PFAM:PF07883 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3018956..3019879 - |
|
