You are here

Home

KJC3_002596-T1, KJC3_002596-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002596-T1
Unique NameKJC3_002596-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3021755..3023150+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002596-T1 ID=KJC3_002596-T1|Name=KJC3_002596-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1396bp|location=Sequence derived from alignment at ch2:3021755..3023150+ (Aspergillus niger KJC3)
ATGTCCACCACAGCCACTATCACCACCACCACTACAACCACTACCACCGC
GGAGCATCCCAAAGGTCAAAACCGCATGCTCCTCGACGGCAAACCCACCA
ACTACGGCGACTTCCGCGACGCGCTCAACCGCGATGGTTACGCCGTAATC
AAGGGAGCGATTCCACTTGATCGGGCTAAAGGATATGCGGATGCGTTTTA
CTCGTACATGGAGGGATTGTAATCATTGCTTTTCCTACCTTATCCCAATA
CTACTGTCCTATTCGATAAATCGTATACTAATAATATAATGACAGTAACC
TCGGCTTCAACCGGAACGACCCCAGCACCGTCCGACGGGCCAAACTGCCC
GTGCTGAACGAAAAAGGCATGATACTCGACTATGGCGTGACGCACGAGCA
GTGGGTGTGGGATATTCGCGGAGAAGAAGGGGTAGTGAATGCATTCCAGA
AGGTGTATGATGATGAGGACTTGATTGTTTCGTTTGATGTGGTGAATGTG
GGGTTTGCTAAGTATTTCTCTCCTATCTTCTCCCCTTCTATGTGTTTGTG
CTAACGGGTGTGGTGATAGTCGGGAGGATTTGCCTGAGAAGTGAGTATAC
CACCACACTACCCCTCATATGAAGGAAGGGGAATACTGATAAAGAACACA
GCAAACCCTGGCCCCACCAAGACCAAGACCCCTCCAAACCAGGCTTCAGA
TGTACGTCTACCCTTTTCCTCTTCCCCCCTTTTATTTGATTCCACAACCA
CTGACAAGAAATAATGGGCAGGCTTGCAAGGCCTCGTCAACCTCCTCCCC
AACGGCCCGAACGACGGCGGTCTAATCGTCTGCAAAGGCGGGCACGCGCT
CTCCGCACAATTCCACGCCGAAATGGCGCACGAAGAGCGTATTCCCGCCT
GGACGCCCGAATGGTTCGGGTTCACTGATGCGGGGATGAAGTGGCTCGCG
GACCACGGGCTTGAATGGGAGAAGGTATGTGCTGAGCCTGGCGACTTGAT
CGTTTGGGATAGTCGCACGCCGCATTATAATGTGGCTCCGACGGGTGGTG
TGGATCGGTTGGCGGTATATACGTGCTATATGCCTGTGGCGGAGGTTGAG
AAGGAGGATTTGGTGAGGAAGAAGGGGGCTTTTGAACGTGAGTTGATTTA
TGCCCTTTTTTTGGTGATATGTGGGTTTGGGCGTGGGATGTGCTAATAGA
GTGGTTGGTAGGTCGGTTGGGAACGACCCATTGGCCGCATGCGAAACATG
TCTCGAAGACTAATATTGCCATGCGGGATGGGAAGCCTTGTCCGGTTGCG
AGGGAGAGGCCCGTGCAGGAGCCGGTGTTGAGTGAGAGGGTGTTTAAGTT
GACGGGGATTCCGTATTTGGAGAGGATGGAGGGGGTTGCTGCTTAG
back to top

Coding sequence (CDS) from alignment at ch2:3021755..3023150+

>KJC3_002596-T1 ID=KJC3_002596-T1|Name=KJC3_002596-T1|organism=Aspergillus niger KJC3|type=CDS|length=6336bp|location=Sequence derived from alignment at ch2:3021755..3023150+ (Aspergillus niger KJC3)
ATGTCCACCACAGCCACTATCACCACCACCACTACAACCACTACCACCGC
GGAGCATCCCAAAGGTCAAAACCGCATGCTCCTCGACGGCAAACCCACCA
ACTACGGCGACTTCCGCGACGCGCTCAACCGCGATGGTTACGCCGTAATC
AAGGGAGCGATTCCACTTGATCGGGCTAAAGGATATGCGGATGCGTTTTA
CTCGTACATGGAGGGATTTAACCTCGGCTTCAACCGGAACGACCCCAGCA
CCGTCCGACGGGCCAAACTGCCCGTGCTGAACGAAAAAGGCATGATACTC
GACTATGGCGTGACGCACGAGCAGTGGGTGTGGGATATTCGCGGAGAAGA
AGGGGTAGTGAATGCATTCCAGAAGGTGTATGATGATGAGGACTTGATTG
TTTCGTTTGATGTGGTGAATGTGGGGTTTGCTAATCGGGAGGATTTGCCT
GAGAACAAACCCTGGCCCCACCAAGACCAAGACCCCTCCAAACCAGGCTT
CAGATGCTTGCAAGGCCTCGTCAACCTCCTCCCCAACGGCCCGAACGACG
GCGGTCTAATCGTCTGCAAAGGCGGGCACGCGCTCTCCGCACAATTCCAC
GCCGAAATGGCGCACGAAGAGCGTATTCCCGCCTGGACGCCCGAATGGTT
CGGGTTCACTGATGCGGGGATGAAGTGGCTCGCGGACCACGGGCTTGAAT
GGGAGAAGGTATGTGCTGAGCCTGGCGACTTGATCGTTTGGGATAGTCGC
ACGCCGCATTATAATGTGGCTCCGACGGGTGGTGTGGATCGGTTGGCGGT
ATATACGTGCTATATGCCTGTGGCGGAGGTTGAGAAGGAGGATTTGGTGA
GGAAGAAGGGGGCTTTTGAACGTCGGTTGGGAACGACCCATTGGCCGCAT
GCGAAACATGTCTCGAAGACTAATATTGCCATGCGGGATGGGAAGCCTTG
TCCGGTTGCGAGGGAGAGGCCCGTGCAGGAGCCGGTGTTGAGTGAGAGGG
TGTTTAAGTTGACGGGGATTCCGTATTTGGAGAGGATGGAGGGGGTTGCT
GCTTAGATGTCCACCACAGCCACTATCACCACCACCACTACAACCACTAC
CACCGCGGAGCATCCCAAAGGTCAAAACCGCATGCTCCTCGACGGCAAAC
CCACCAACTACGGCGACTTCCGCGACGCGCTCAACCGCGATGGTTACGCC
GTAATCAAGGGAGCGATTCCACTTGATCGGGCTAAAGGATATGCGGATGC
GTTTTACTCGTACATGGAGGGATTTAACCTCGGCTTCAACCGGAACGACC
CCAGCACCGTCCGACGGGCCAAACTGCCCGTGCTGAACGAAAAAGGCATG
ATACTCGACTATGGCGTGACGCACGAGCAGTGGGTGTGGGATATTCGCGG
AGAAGAAGGGGTAGTGAATGCATTCCAGAAGGTGTATGATGATGAGGACT
TGATTGTTTCGTTTGATGTGGTGAATGTGGGGTTTGCTAATCGGGAGGAT
TTGCCTGAGAACAAACCCTGGCCCCACCAAGACCAAGACCCCTCCAAACC
AGGCTTCAGATGCTTGCAAGGCCTCGTCAACCTCCTCCCCAACGGCCCGA
ACGACGGCGGTCTAATCGTCTGCAAAGGCGGGCACGCGCTCTCCGCACAA
TTCCACGCCGAAATGGCGCACGAAGAGCGTATTCCCGCCTGGACGCCCGA
ATGGTTCGGGTTCACTGATGCGGGGATGAAGTGGCTCGCGGACCACGGGC
TTGAATGGGAGAAGGTATGTGCTGAGCCTGGCGACTTGATCGTTTGGGAT
AGTCGCACGCCGCATTATAATGTGGCTCCGACGGGTGGTGTGGATCGGTT
GGCGGTATATACGTGCTATATGCCTGTGGCGGAGGTTGAGAAGGAGGATT
TGGTGAGGAAGAAGGGGGCTTTTGAACGTCGGTTGGGAACGACCCATTGG
CCGCATGCGAAACATGTCTCGAAGACTAATATTGCCATGCGGGATGGGAA
GCCTTGTCCGGTTGCGAGGGAGAGGCCCGTGCAGGAGCCGGTGTTGAGTG
AGAGGGTGTTTAAGTTGACGGGGATTCCGTATTTGGAGAGGATGGAGGGG
GTTGCTGCTTAGATGTCCACCACAGCCACTATCACCACCACCACTACAAC
CACTACCACCGCGGAGCATCCCAAAGGTCAAAACCGCATGCTCCTCGACG
GCAAACCCACCAACTACGGCGACTTCCGCGACGCGCTCAACCGCGATGGT
TACGCCGTAATCAAGGGAGCGATTCCACTTGATCGGGCTAAAGGATATGC
GGATGCGTTTTACTCGTACATGGAGGGATTTAACCTCGGCTTCAACCGGA
ACGACCCCAGCACCGTCCGACGGGCCAAACTGCCCGTGCTGAACGAAAAA
GGCATGATACTCGACTATGGCGTGACGCACGAGCAGTGGGTGTGGGATAT
TCGCGGAGAAGAAGGGGTAGTGAATGCATTCCAGAAGGTGTATGATGATG
AGGACTTGATTGTTTCGTTTGATGTGGTGAATGTGGGGTTTGCTAATCGG
GAGGATTTGCCTGAGAACAAACCCTGGCCCCACCAAGACCAAGACCCCTC
CAAACCAGGCTTCAGATGCTTGCAAGGCCTCGTCAACCTCCTCCCCAACG
GCCCGAACGACGGCGGTCTAATCGTCTGCAAAGGCGGGCACGCGCTCTCC
GCACAATTCCACGCCGAAATGGCGCACGAAGAGCGTATTCCCGCCTGGAC
GCCCGAATGGTTCGGGTTCACTGATGCGGGGATGAAGTGGCTCGCGGACC
ACGGGCTTGAATGGGAGAAGGTATGTGCTGAGCCTGGCGACTTGATCGTT
TGGGATAGTCGCACGCCGCATTATAATGTGGCTCCGACGGGTGGTGTGGA
TCGGTTGGCGGTATATACGTGCTATATGCCTGTGGCGGAGGTTGAGAAGG
AGGATTTGGTGAGGAAGAAGGGGGCTTTTGAACGTCGGTTGGGAACGACC
CATTGGCCGCATGCGAAACATGTCTCGAAGACTAATATTGCCATGCGGGA
TGGGAAGCCTTGTCCGGTTGCGAGGGAGAGGCCCGTGCAGGAGCCGGTGT
TGAGTGAGAGGGTGTTTAAGTTGACGGGGATTCCGTATTTGGAGAGGATG
GAGGGGGTTGCTGCTTAGATGTCCACCACAGCCACTATCACCACCACCAC
TACAACCACTACCACCGCGGAGCATCCCAAAGGTCAAAACCGCATGCTCC
TCGACGGCAAACCCACCAACTACGGCGACTTCCGCGACGCGCTCAACCGC
GATGGTTACGCCGTAATCAAGGGAGCGATTCCACTTGATCGGGCTAAAGG
ATATGCGGATGCGTTTTACTCGTACATGGAGGGATTTAACCTCGGCTTCA
ACCGGAACGACCCCAGCACCGTCCGACGGGCCAAACTGCCCGTGCTGAAC
GAAAAAGGCATGATACTCGACTATGGCGTGACGCACGAGCAGTGGGTGTG
GGATATTCGCGGAGAAGAAGGGGTAGTGAATGCATTCCAGAAGGTGTATG
ATGATGAGGACTTGATTGTTTCGTTTGATGTGGTGAATGTGGGGTTTGCT
AATCGGGAGGATTTGCCTGAGAACAAACCCTGGCCCCACCAAGACCAAGA
CCCCTCCAAACCAGGCTTCAGATGCTTGCAAGGCCTCGTCAACCTCCTCC
CCAACGGCCCGAACGACGGCGGTCTAATCGTCTGCAAAGGCGGGCACGCG
CTCTCCGCACAATTCCACGCCGAAATGGCGCACGAAGAGCGTATTCCCGC
CTGGACGCCCGAATGGTTCGGGTTCACTGATGCGGGGATGAAGTGGCTCG
CGGACCACGGGCTTGAATGGGAGAAGGTATGTGCTGAGCCTGGCGACTTG
ATCGTTTGGGATAGTCGCACGCCGCATTATAATGTGGCTCCGACGGGTGG
TGTGGATCGGTTGGCGGTATATACGTGCTATATGCCTGTGGCGGAGGTTG
AGAAGGAGGATTTGGTGAGGAAGAAGGGGGCTTTTGAACGTCGGTTGGGA
ACGACCCATTGGCCGCATGCGAAACATGTCTCGAAGACTAATATTGCCAT
GCGGGATGGGAAGCCTTGTCCGGTTGCGAGGGAGAGGCCCGTGCAGGAGC
CGGTGTTGAGTGAGAGGGTGTTTAAGTTGACGGGGATTCCGTATTTGGAG
AGGATGGAGGGGGTTGCTGCTTAGATGTCCACCACAGCCACTATCACCAC
CACCACTACAACCACTACCACCGCGGAGCATCCCAAAGGTCAAAACCGCA
TGCTCCTCGACGGCAAACCCACCAACTACGGCGACTTCCGCGACGCGCTC
AACCGCGATGGTTACGCCGTAATCAAGGGAGCGATTCCACTTGATCGGGC
TAAAGGATATGCGGATGCGTTTTACTCGTACATGGAGGGATTTAACCTCG
GCTTCAACCGGAACGACCCCAGCACCGTCCGACGGGCCAAACTGCCCGTG
CTGAACGAAAAAGGCATGATACTCGACTATGGCGTGACGCACGAGCAGTG
GGTGTGGGATATTCGCGGAGAAGAAGGGGTAGTGAATGCATTCCAGAAGG
TGTATGATGATGAGGACTTGATTGTTTCGTTTGATGTGGTGAATGTGGGG
TTTGCTAATCGGGAGGATTTGCCTGAGAACAAACCCTGGCCCCACCAAGA
CCAAGACCCCTCCAAACCAGGCTTCAGATGCTTGCAAGGCCTCGTCAACC
TCCTCCCCAACGGCCCGAACGACGGCGGTCTAATCGTCTGCAAAGGCGGG
CACGCGCTCTCCGCACAATTCCACGCCGAAATGGCGCACGAAGAGCGTAT
TCCCGCCTGGACGCCCGAATGGTTCGGGTTCACTGATGCGGGGATGAAGT
GGCTCGCGGACCACGGGCTTGAATGGGAGAAGGTATGTGCTGAGCCTGGC
GACTTGATCGTTTGGGATAGTCGCACGCCGCATTATAATGTGGCTCCGAC
GGGTGGTGTGGATCGGTTGGCGGTATATACGTGCTATATGCCTGTGGCGG
AGGTTGAGAAGGAGGATTTGGTGAGGAAGAAGGGGGCTTTTGAACGTCGG
TTGGGAACGACCCATTGGCCGCATGCGAAACATGTCTCGAAGACTAATAT
TGCCATGCGGGATGGGAAGCCTTGTCCGGTTGCGAGGGAGAGGCCCGTGC
AGGAGCCGGTGTTGAGTGAGAGGGTGTTTAAGTTGACGGGGATTCCGTAT
TTGGAGAGGATGGAGGGGGTTGCTGCTTAGATGTCCACCACAGCCACTAT
CACCACCACCACTACAACCACTACCACCGCGGAGCATCCCAAAGGTCAAA
ACCGCATGCTCCTCGACGGCAAACCCACCAACTACGGCGACTTCCGCGAC
GCGCTCAACCGCGATGGTTACGCCGTAATCAAGGGAGCGATTCCACTTGA
TCGGGCTAAAGGATATGCGGATGCGTTTTACTCGTACATGGAGGGATTTA
ACCTCGGCTTCAACCGGAACGACCCCAGCACCGTCCGACGGGCCAAACTG
CCCGTGCTGAACGAAAAAGGCATGATACTCGACTATGGCGTGACGCACGA
GCAGTGGGTGTGGGATATTCGCGGAGAAGAAGGGGTAGTGAATGCATTCC
AGAAGGTGTATGATGATGAGGACTTGATTGTTTCGTTTGATGTGGTGAAT
GTGGGGTTTGCTAATCGGGAGGATTTGCCTGAGAACAAACCCTGGCCCCA
CCAAGACCAAGACCCCTCCAAACCAGGCTTCAGATGCTTGCAAGGCCTCG
TCAACCTCCTCCCCAACGGCCCGAACGACGGCGGTCTAATCGTCTGCAAA
GGCGGGCACGCGCTCTCCGCACAATTCCACGCCGAAATGGCGCACGAAGA
GCGTATTCCCGCCTGGACGCCCGAATGGTTCGGGTTCACTGATGCGGGGA
TGAAGTGGCTCGCGGACCACGGGCTTGAATGGGAGAAGGTATGTGCTGAG
CCTGGCGACTTGATCGTTTGGGATAGTCGCACGCCGCATTATAATGTGGC
TCCGACGGGTGGTGTGGATCGGTTGGCGGTATATACGTGCTATATGCCTG
TGGCGGAGGTTGAGAAGGAGGATTTGGTGAGGAAGAAGGGGGCTTTTGAA
CGTCGGTTGGGAACGACCCATTGGCCGCATGCGAAACATGTCTCGAAGAC
TAATATTGCCATGCGGGATGGGAAGCCTTGTCCGGTTGCGAGGGAGAGGC
CCGTGCAGGAGCCGGTGTTGAGTGAGAGGGTGTTTAAGTTGACGGGGATT
CCGTATTTGGAGAGGATGGAGGGGGTTGCTGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002596KJC3_002596Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002596-T1KJC3_002596-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002596-T1.exon1KJC3_002596-T1.exon1Aspergillus niger KJC3exon
KJC3_002596-T1.exon2KJC3_002596-T1.exon2Aspergillus niger KJC3exon
KJC3_002596-T1.exon3KJC3_002596-T1.exon3Aspergillus niger KJC3exon
KJC3_002596-T1.exon4KJC3_002596-T1.exon4Aspergillus niger KJC3exon
KJC3_002596-T1.exon5KJC3_002596-T1.exon5Aspergillus niger KJC3exon
KJC3_002596-T1.exon6KJC3_002596-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002596-T1.cdsKJC3_002596-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3021755..3023150 +
Powered by Drupal